Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

DYW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C06C07sing1.55Å1.62Å
C06C05sing1.55Å1.35Å
O51C50doub1.21Å1.26Å
C07N03sing1.48Å1.35Å
C50O52sing1.34Å1.27Å
C50C49sing1.51Å1.49Å
C49C48sing1.53Å1.49Å
C05C04sing1.54Å1.57Å
N03C04sing1.47Å1.53Å
N03C02sing1.35Å1.46Å
C04C08sing1.51Å1.44Å
N53C48sing1.47Å1.47Å
C48C02sing1.51Å1.55Å
C02O01doub1.21Å1.18Å
C08O47doub1.21Å1.20Å
C49H1sing1.09Å1.10Å
C49H2sing1.09Å1.10Å
C04H3sing1.09Å1.10Å
C05H4sing1.09Å1.10Å
C05H5sing1.09Å1.10Å
C06H6sing1.09Å1.10Å
C06H7sing1.09Å1.10Å
C07H8sing1.09Å1.10Å
C07H9sing1.09Å1.10Å
C48H11sing1.09Å1.10Å
N53H12sing1.01Å1.00Å
N53H13sing1.01Å1.00Å
O52H15sing0.97Å0.95Å
C08O1sing1.34Å1.47Å
O1H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C07C06C05107.1°101.6°
C06C07N03104.8°104.8°
C07C06H6110.1°111.0°
C07C06H7110.1°111.0°
C06C07H8110.7°110.4°
C06C07H9110.6°110.4°
C06C05C04105.2°103.0°
C06C05H4110.6°110.8°
C06C05H5110.5°110.9°
C05C06H6110.0°111.0°
C05C06H7110.1°111.1°
O51C50O52122.9°119.9°
O51C50C49117.6°120.0°
C07N03C04109.6°108.5°
C07N03C02130.0°125.7°
N03C07H8110.6°110.5°
N03C07H9110.6°110.3°
O52C50C49119.4°120.0°
C50O52H15109.5°117.0°
C50C49C48114.2°109.5°
C50C49H1108.3°109.5°
C50C49H2108.3°109.4°
C49C48N53108.9°109.5°
C49C48C02112.4°109.5°
C48C49H1108.3°109.5°
C48C49H2108.3°109.5°
C49C48H11104.8°109.5°
C05C04N03104.4°107.4°
C05C04C08108.6°109.9°
C05C04H3109.9°109.9°
C04C05H4110.5°110.7°
C04C05H5110.5°110.7°
C04N03C02120.3°125.8°
N03C04C08111.6°109.9°
N03C04H3110.3°109.8°
N03C02C48130.7°120.0°
N03C02O01113.5°120.0°
C04C08O47123.3°120.1°
C08C04H3111.7°109.9°
C04C08O1120.6°120.0°
N53C48C02120.1°109.4°
N53C48H11105.0°109.5°
C48N53H12109.5°111.0°
C48N53H13109.5°111.0°
C48C02O01115.9°120.0°
C02C48H11104.3°109.4°
O47C08O1116.1°120.0°
H1C49H2109.4°109.4°
H4C05H5109.5°110.6°
H6C06H7109.5°110.9°
H8C07H9109.5°110.4°
H12N53H13109.5°111.0°
C08O1H10109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C07C06C05H6119.6°118.0°
C07C06C05H7119.6°118.1°
C06C07N03H8119.3°118.9°
C06C07N03H9119.2°118.8°
C07C06C05C0428.8°35.5°
C06C07N03C0415.9°24.3°
C06C07N03C02166.8°155.8°
C07C06C05H4148.1°82.9°
C07C06C05H590.5°154.0°
C07C06H6H7121.1°123.9°
C06C07H8H9122.2°122.3°
C05C06C07N0329.8°37.1°
C06C05C04H4119.3°118.4°
C06C05C04H5119.3°118.6°
C06C05C04N0319.4°22.1°
C06C05C04C08138.6°141.6°
C06C05C04H398.9°97.3°
C06C05H4H5122.0°123.3°
C05C06H6H7121.1°124.0°
C05C06C07H889.5°81.8°
C05C06C07H9149.0°155.9°
O51C50O52C49176.4°180.0°
O51C50C49C4863.6°0.0°
O51C50C49H157.1°120.0°
O51C50C49H2175.7°120.0°
O51C50O52H150.0°0.0°
C07N03C04C050.1°1.2°
C07N03C04C02177.6°179.9°
C07N03C04C08117.2°118.3°
C07N03C02C482.5°0.0°
C07N03C02O01179.2°180.0°
C07N03C04H3117.9°120.7°
N03C07C06H689.9°155.1°
N03C07C06H7149.4°81.1°
N03C07H8H9122.1°122.2°
O52C50C49C48119.8°180.0°
O52C50C49H1119.5°60.0°
O52C50C49H20.9°60.0°
C50C49C48H1120.7°120.0°
C50C49C48H2120.7°120.0°
C50C49C48N53162.9°65.0°
C50C49C48C0227.4°175.0°
C50C49H1H2117.8°120.0°
C50C49C48H1185.2°55.0°
C49C50O52H15176.4°180.0°
C49C48C02N0381.5°80.0°
C49C48N53C02131.5°120.0°
C49C48N53H11111.8°120.0°
C49C48C02H11112.9°120.0°
C49C48C02O0196.8°100.0°
C48C49H1H2117.8°120.0°
C49C48N53H12180.0°176.0°
C49C48N53H1360.0°60.0°
C05C04N03C08117.1°119.5°
C05C04N03H3118.0°119.5°
C05C04N03C02177.5°178.9°
C05C04C08H3121.4°121.1°
C05C04C08O4796.7°118.2°
C04C05H4H5122.0°123.1°
C04C05C06H690.9°153.5°
C04C05C06H7148.4°82.6°
C05C04C08O183.6°61.7°
N03C04C08H3124.1°121.0°
C04N03C02C48179.5°179.8°
C04N03C02O012.2°0.1°
N03C04C08O47148.8°0.3°
N03C04C05H4138.8°96.3°
N03C04C05H599.9°140.7°
C04N03C07H8103.3°94.6°
C04N03C07H9135.2°143.1°
N03C04C08O130.9°179.7°
C02N03C04C0860.4°61.5°
N03C02C48N5348.5°160.0°
N03C02C48O01178.3°179.9°
C02N03C04H364.5°59.4°
C02N03C07H873.9°85.2°
C02N03C07H947.5°37.0°
N03C02C48H11165.6°40.0°
C04C08O47O1179.8°179.9°
C08C04C05H4102.1°23.2°
C08C04C05H519.3°99.8°
C04C08O1H10179.8°180.0°
N53C48C02H11117.1°119.9°
N53C48C02O01133.2°20.1°
N53C48C49H142.1°175.0°
N53C48C49H276.4°55.0°
C48N53H12H13120.0°124.0°
C02C48C49H193.3°55.0°
C02C48C49H2148.1°65.0°
C02C48N53H1248.5°64.0°
C02C48N53H1371.5°60.0°
O01C02C48H1116.1°140.0°
O47C08C04H324.7°120.7°
O47C08O1H100.0°0.0°
H1C49C48H11154.1°65.0°
H2C49C48H1135.5°175.0°
H3C04C05H420.4°144.2°
H3C04C05H5141.8°21.2°
H3C04C08O1155.0°59.4°
H4C05C06H628.4°35.1°
H4C05C06H792.3°159.0°
H5C05C06H6149.8°88.0°
H5C05C06H729.1°35.9°
H6C06C07H8150.9°36.1°
H6C06C07H929.4°86.1°
H7C06C07H830.2°159.9°
H7C06C07H991.3°37.7°
H11C48N53H1268.2°56.0°
H11C48N53H13171.8°180.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon