DYL
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CG | CD | doub | 1.31Å | 1.32Å | |
| CG | CB | sing | 1.51Å | 1.49Å | |
| CB | CA | sing | 1.53Å | 1.54Å | |
| N | CA | sing | 1.47Å | 1.47Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| C | O | doub | 1.21Å | 1.24Å | |
| C | OXT | sing | 1.34Å | 1.34Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | H5 | sing | 1.09Å | 1.10Å | |
| CB | H6 | sing | 1.09Å | 1.10Å | |
| CG | H7 | sing | 1.08Å | 1.08Å | |
| CD | H8 | sing | 1.08Å | 1.08Å | |
| CD | H9 | sing | 1.08Å | 1.08Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CD | CG | CB | 120.5° | 120.0° |
| CD | CG | H7 | 119.8° | 120.0° |
| CG | CD | H8 | 120.0° | 120.0° |
| CG | CD | H9 | 120.0° | 120.0° |
| CG | CB | CA | 108.1° | 109.5° |
| CG | CB | H5 | 109.8° | 109.4° |
| CG | CB | H6 | 109.8° | 109.4° |
| CB | CG | H7 | 119.7° | 120.0° |
| CB | CA | N | 111.0° | 109.5° |
| CB | CA | C | 111.2° | 109.5° |
| CB | CA | HA | 106.4° | 109.5° |
| CA | CB | H5 | 109.8° | 109.5° |
| CA | CB | H6 | 109.8° | 109.5° |
| N | CA | C | 114.1° | 109.4° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 111.0° |
| N | CA | HA | 107.2° | 109.5° |
| CA | C | O | 120.9° | 120.0° |
| CA | C | OXT | 114.4° | 120.0° |
| C | CA | HA | 106.4° | 109.5° |
| O | C | OXT | 124.7° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| H | N | H2 | 109.5° | 111.0° |
| H5 | CB | H6 | 109.5° | 109.5° |
| H8 | CD | H9 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CD | CG | CB | H7 | 180.0° | 179.9° |
| CD | CG | CB | CA | 115.2° | 125.0° |
| CD | CG | CB | H5 | 125.0° | 5.0° |
| CD | CG | CB | H6 | 4.6° | 115.0° |
| CG | CD | H8 | H9 | 180.0° | 180.0° |
| CG | CB | CA | H5 | 119.8° | 120.0° |
| CG | CB | CA | H6 | 119.8° | 120.0° |
| CG | CB | CA | N | 118.3° | 65.0° |
| CG | CB | CA | C | 113.5° | 175.0° |
| CG | CB | CA | HA | 1.9° | 55.0° |
| CG | CB | H5 | H6 | 120.6° | 120.0° |
| CB | CG | CD | H8 | 180.0° | 0.0° |
| CB | CG | CD | H9 | 0.0° | 180.0° |
| CB | CA | N | C | 126.6° | 120.0° |
| CB | CA | N | HA | 115.8° | 120.0° |
| CB | CA | C | HA | 115.4° | 120.0° |
| CB | CA | C | O | 100.9° | 100.0° |
| CB | CA | C | OXT | 79.7° | 80.0° |
| CB | CA | N | H | 180.0° | 64.0° |
| CB | CA | N | H2 | 60.0° | 60.0° |
| CA | CB | H5 | H6 | 120.7° | 120.0° |
| CA | CB | CG | H7 | 64.8° | 55.0° |
| N | CA | C | HA | 118.0° | 120.0° |
| N | CA | C | O | 25.6° | 20.0° |
| N | CA | C | OXT | 153.8° | 160.0° |
| CA | N | H | H2 | 120.0° | 124.0° |
| N | CA | CB | H5 | 1.5° | 175.0° |
| N | CA | CB | H6 | 121.9° | 54.9° |
| CA | C | O | OXT | 179.4° | 180.0° |
| C | CA | N | H | 53.4° | 176.1° |
| C | CA | N | H2 | 173.4° | 60.0° |
| C | CA | CB | H5 | 126.7° | 55.1° |
| C | CA | CB | H6 | 6.3° | 65.0° |
| CA | C | OXT | HXT | 179.4° | 180.0° |
| O | C | CA | HA | 143.7° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| OXT | C | CA | HA | 35.8° | 40.1° |
| H | N | CA | HA | 64.2° | 56.0° |
| H2 | N | CA | HA | 55.9° | 180.0° |
| HA | CA | CB | H5 | 117.8° | 65.0° |
| HA | CA | CB | H6 | 121.7° | 174.9° |
| H5 | CB | CG | H7 | 55.0° | 174.9° |
| H6 | CB | CG | H7 | 175.4° | 65.0° |
| H7 | CG | CD | H8 | 0.0° | 180.0° |
| H7 | CG | CD | H9 | 180.0° | 0.1° |
