Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DXV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C16sing1.38Å1.36ÅAromatic
N1C15sing1.36Å1.38ÅAromatic
N2C16doub1.33Å1.34ÅAromatic
N2C19sing1.32Å1.33ÅAromatic
C16C14sing1.41Å1.42ÅAromatic
C15C11doub1.36Å1.37ÅAromatic
C19C18doub1.40Å1.41ÅAromatic
C11C14sing1.47Å1.45ÅAromatic
C11C9sing1.48Å1.48Å
C14C17doub1.39Å1.39ÅAromatic
C18C17sing1.39Å1.40ÅAromatic
C18C20sing1.48Å1.49Å
C9C12doub1.40Å1.39ÅAromatic
C9C7sing1.40Å1.40ÅAromatic
C12C10sing1.37Å1.38ÅAromatic
C22C20doub1.39Å1.39ÅAromatic
C22C24sing1.38Å1.39ÅAromatic
C20C21sing1.39Å1.40ÅAromatic
C7C6doub1.37Å1.40ÅAromatic
C24C25doub1.38Å1.38ÅAromatic
C10C8doub1.40Å1.40ÅAromatic
C21C23doub1.38Å1.39ÅAromatic
C2C5sing1.55Å1.53Å
C2C1sing1.55Å1.53Å
C6C8sing1.40Å1.41ÅAromatic
C6C1sing1.51Å1.51Å
C25C23sing1.38Å1.38ÅAromatic
C8C13sing1.47Å1.51Å
C5C4sing1.54Å1.48Å
C1C3sing1.54Å1.53Å
O1C13doub1.22Å1.25Å
C13O2sing1.35Å1.24Å
C4C3sing1.54Å1.52Å
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C7H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C12H7sing1.08Å1.08Å
N1H8sing0.97Å1.00Å
C3H9sing1.09Å1.10Å
C3H10sing1.09Å1.10Å
O2H11sing0.97Å0.95Å
C1H12sing1.09Å1.10Å
C2H13sing1.09Å1.10Å
C2H14sing1.09Å1.10Å
C15H15sing1.08Å1.08Å
C17H16sing1.08Å1.08Å
C19H17sing1.08Å1.08Å
C21H18sing1.08Å1.08Å
C22H19sing1.08Å1.08Å
C23H20sing1.08Å1.08Å
C24H21sing1.08Å1.08Å
C25H22sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16N1C15108.4°110.3°
N1C16N2125.5°132.7°
N1C16C14108.5°107.3°
C16N1H8125.8°124.9°
N1C15C11110.9°109.8°
C15N1H8125.8°124.8°
N1C15H15124.5°125.0°
C16N2C19115.5°121.9°
N2C16C14126.0°120.0°
N2C19C18124.3°121.4°
N2C19H17117.8°119.3°
C16C14C11106.6°106.1°
C16C14C17116.8°119.7°
C15C11C14105.6°106.5°
C15C11C9126.5°126.7°
C11C15H15124.5°125.2°
C19C18C17118.6°119.1°
C19C18C20120.8°120.5°
C18C19H17117.9°119.3°
C14C11C9127.9°126.7°
C11C14C17136.6°134.2°
C11C9C12119.3°120.0°
C11C9C7121.8°120.0°
C14C17C18118.8°118.0°
C14C17H16120.6°121.0°
C17C18C20120.6°120.4°
C18C17H16120.6°121.0°
C18C20C22121.7°120.1°
C18C20C21121.2°120.1°
C12C9C7118.8°120.0°
C9C12C10120.9°120.0°
C9C12H7119.5°120.0°
C9C7C6121.2°120.1°
C9C7H5119.4°120.0°
C12C10C8120.8°120.0°
C12C10H6119.6°120.0°
C10C12H7119.6°120.0°
C20C22C24121.3°119.9°
C22C20C21117.1°119.8°
C20C22H19119.3°120.0°
C22C24C25120.4°120.2°
C24C22H19119.4°120.1°
C22C24H21119.8°119.9°
C20C21C23121.5°119.9°
C20C21H18119.3°120.1°
C7C6C8119.2°119.9°
C7C6C1119.4°120.0°
C6C7H5119.4°120.0°
C24C25C23119.5°120.2°
C25C24H21119.8°119.9°
C24C25H22120.2°119.9°
C10C8C6118.9°120.0°
C10C8C13116.6°120.0°
C8C10H6119.6°120.0°
C21C23C25120.2°120.1°
C23C21H18119.2°120.1°
C21C23H20119.9°120.0°
C5C2C1107.3°102.7°
C2C5C4107.6°104.2°
C2C5H3109.9°110.4°
C2C5H4109.9°110.6°
C5C2H13110.0°110.8°
C5C2H14110.0°110.7°
C2C1C6116.1°110.5°
C2C1C3103.9°104.2°
C2C1H12106.5°110.6°
C1C2H13110.0°110.8°
C1C2H14110.0°110.8°
C8C6C1121.3°120.1°
C6C8C13124.5°120.0°
C6C1C3116.4°110.5°
C6C1H12106.7°110.4°
C25C23H20119.9°119.9°
C23C25H22120.3°119.8°
C8C13O1117.5°120.0°
C8C13O2118.2°120.0°
C5C4C3106.2°106.6°
C5C4H1110.3°110.1°
C5C4H2110.3°110.1°
C4C5H3109.9°110.5°
C4C5H4109.9°110.5°
C1C3C4106.0°106.6°
C1C3H9110.3°110.0°
C1C3H10110.3°110.1°
C3C1H12106.5°110.5°
O1C13O2124.1°120.0°
C13O2H11109.5°117.0°
C3C4H1110.3°110.0°
C3C4H2110.3°110.0°
C4C3H9110.3°110.0°
C4C3H10110.3°110.0°
H1C4H2109.5°110.0°
H3C5H4109.5°110.4°
H9C3H10109.5°110.0°
H13C2H14109.5°110.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16N1C15H8180.0°180.0°
N1C16N2C14179.3°179.4°
N1C16N2C19178.9°179.1°
C16N1C15C110.1°0.3°
N1C16C14C110.2°0.5°
N1C16C14C17179.8°179.8°
C16N1C15H15179.9°179.9°
C15N1C16N2179.3°180.0°
C15N1C16C140.2°0.5°
N1C15C11H15180.0°179.8°
N1C15C11C140.0°0.1°
N1C15C11C9179.4°180.0°
C16N2C19C181.3°0.7°
N2C16C14C11179.3°179.9°
N2C16C14C170.4°0.2°
N2C16N1H80.7°0.0°
C16N2C19H17178.7°180.0°
C19N2C16C140.5°0.3°
N2C19C18H17180.0°179.3°
N2C19C18C171.3°0.5°
N2C19C18C20179.2°179.5°
C16C14C11C150.1°0.4°
C16C14C11C17179.6°179.6°
C16C14C11C9179.3°179.7°
C16C14C17C180.5°0.4°
C14C16N1H8179.9°179.5°
C16C14C17H16179.5°179.7°
C15C11C14C9179.4°179.9°
C15C11C14C17179.6°180.0°
C15C11C9C1226.6°130.0°
C15C11C9C7150.1°50.0°
C11C15N1H8179.9°179.7°
C19C18C17C140.3°0.0°
C19C18C17C20178.0°180.0°
C19C18C20C2219.5°179.7°
C19C18C20C21156.8°0.0°
C19C18C17H16179.7°180.0°
C11C14C17C18179.1°180.0°
C14C11C9C12154.1°49.9°
C14C11C9C729.2°130.1°
C14C11C15H15180.0°179.7°
C11C14C17H160.9°0.1°
C9C11C14C170.2°0.1°
C11C9C12C7176.8°180.0°
C11C9C12C10180.0°179.7°
C11C9C7C6179.3°180.0°
C11C9C7H50.7°0.1°
C11C9C12H70.0°0.0°
C9C11C15H150.5°0.2°
C14C17C18H16180.0°180.0°
C14C17C18C20178.2°180.0°
C17C18C20C22162.6°0.3°
C17C18C20C2121.2°180.0°
C17C18C19H17178.8°179.8°
C18C20C22C21176.4°179.7°
C18C20C22C24178.2°180.0°
C18C20C21C23178.4°180.0°
C20C18C17H161.8°0.0°
C20C18C19H170.8°0.2°
C18C20C21H181.6°0.1°
C18C20C22H191.8°0.0°
C9C12C10H7180.0°179.7°
C12C9C7C62.6°0.0°
C9C12C10C83.0°0.5°
C12C9C7H5177.4°179.9°
C9C12C10H6177.0°180.0°
C7C9C12C103.2°0.3°
C9C7C6H5180.0°179.9°
C9C7C6C81.7°0.1°
C9C7C6C1179.6°179.7°
C7C9C12H7176.8°180.0°
C12C10C8H6180.0°179.5°
C12C10C8C62.0°0.4°
C12C10C8C13179.8°179.5°
C20C22C24H19180.0°180.0°
C20C22C24C251.0°0.0°
C22C20C21C232.0°0.3°
C22C20C21H18178.0°179.8°
C20C22C24H21179.0°179.9°
C24C22C20C211.8°0.3°
C22C24C25H21180.0°179.9°
C22C24C25C230.4°0.3°
C22C24C25H22179.6°180.0°
C20C21C23H18180.0°179.9°
C20C21C23C251.5°0.0°
C21C20C22H19178.2°179.7°
C20C21C23H20178.6°180.0°
C7C6C8C101.3°0.1°
C7C6C1C242.7°48.7°
C7C6C8C1177.9°179.8°
C7C6C8C13179.4°179.7°
C7C6C1C380.2°66.1°
C7C6C1H12161.1°171.4°
C24C25C23C210.6°0.3°
C24C25C23H22180.0°179.6°
C25C24C22H19179.0°180.0°
C24C25C23H20179.4°179.7°
C10C8C6C13178.0°179.9°
C10C8C6C1179.3°180.0°
C10C8C13O141.5°142.3°
C10C8C13O2134.9°37.8°
C8C10C12H7177.0°179.8°
C21C23C25H20180.0°180.0°
C21C23C25H22179.4°180.0°
C5C2C1H13119.7°118.3°
C5C2C1H14119.7°118.3°
C5C2C1C6110.0°156.6°
C2C5C4H3119.7°118.6°
C2C5C4H4119.7°118.8°
C5C2C1C319.2°37.9°
C2C5C4C316.5°23.6°
C2C5C4H1103.0°95.7°
C2C5C4H2136.0°142.9°
C2C5H3H4120.9°122.6°
C5C2C1H12131.5°80.8°
C5C2H13H14121.0°123.3°
C2C1C6C8135.3°131.5°
C2C1C6C3122.8°114.8°
C2C1C6H12118.5°122.7°
C1C2C5C41.8°37.9°
C2C1C3H12112.3°118.8°
C2C1C3C429.3°23.6°
C1C2C5H3117.9°80.7°
C1C2C5H4121.5°156.7°
C2C1C3H990.1°95.7°
C2C1C3H10148.7°142.9°
C1C2H13H14121.0°123.4°
C8C6C1C3101.9°113.7°
C6C8C13O1140.4°37.6°
C6C8C13O243.2°142.3°
C8C6C7H5178.3°180.0°
C6C8C10H6178.0°179.9°
C8C6C1H1216.8°8.8°
C1C6C8C132.7°0.1°
C6C1C3H12118.8°122.5°
C6C1C3C499.6°142.3°
C1C6C7H50.3°0.2°
C6C1C3H9140.9°23.0°
C6C1C3H1019.8°98.4°
C6C1C2H13130.4°85.1°
C6C1C2H149.7°38.3°
C25C23C21H18178.6°179.9°
C23C25C24H21179.6°179.6°
C8C13O1O2176.2°180.0°
C13C8C10H60.2°0.0°
C8C13O2H11176.2°180.0°
C5C4C3C128.8°0.0°
C5C4C3H1119.5°119.3°
C5C4C3H2119.5°119.3°
C5C4H1H2121.5°121.5°
C4C5H3H4120.8°122.6°
C5C4C3H990.6°119.3°
C5C4C3H10148.3°119.4°
C4C5C2H13117.8°156.3°
C4C5C2H14121.5°80.4°
C1C3C4H9119.4°119.3°
C1C3C4H10119.4°119.4°
C1C3C4H190.6°119.3°
C1C3C4H2148.3°119.4°
C1C3H9H10121.6°121.5°
C3C1C2H13100.5°156.2°
C3C1C2H14138.8°80.4°
O1C13O2H110.0°0.0°
C3C4H1H2121.5°121.3°
C3C4C5H3136.2°95.0°
C3C4C5H4103.2°142.4°
C4C3H9H10121.6°121.3°
C4C3C1H12141.6°95.2°
H1C4C5H316.7°145.7°
H1C4C5H4137.3°23.1°
H1C4C3H9149.9°0.0°
H1C4C3H1028.8°121.3°
H2C4C5H3104.3°24.3°
H2C4C5H416.3°98.3°
H2C4C3H928.9°121.4°
H2C4C3H1092.3°0.0°
H3C5C2H13122.5°37.6°
H3C5C2H141.8°160.9°
H4C5C2H131.9°84.9°
H4C5C2H14118.8°38.4°
H6C10C12H73.0°0.3°
H8N1C15H150.1°0.1°
H9C3C1H1222.2°145.5°
H10C3C1H1299.0°24.1°
H12C1C2H1311.8°37.5°
H12C1C2H14108.9°160.9°
H18C21C23H201.4°0.1°
H19C22C24H211.0°0.1°
H20C23C25H220.6°0.0°
H21C24C25H220.4°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon