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DXP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.47Å
C1HC11sing1.09Å1.11Å
C1HC12sing1.09Å1.12Å
C1HC13sing1.09Å1.12Å
C2C3sing1.51Å1.50Å
C2O2doub1.21Å1.23Å
C3C4sing1.53Å1.54Å
C3O3sing1.43Å1.41Å
C3HC3sing1.09Å1.12Å
C4C5sing1.53Å1.52Å
C4O4sing1.43Å1.43Å
C4HC4sing1.09Å1.12Å
C5O5sing1.43Å1.44Å
C5H51sing1.09Å1.12Å
C5H52sing1.09Å1.11Å
O3HO3sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
O5Psing1.61Å1.50Å
PO2Psing1.61Å1.50Å
PO1Psing1.61Å1.50Å
PO3Pdoub1.48Å1.35Å
O2PHOP2sing0.97Å0.95Å
O1PHOP1sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1HC11119.9°109.5°
C2C1HC12108.5°109.5°
C2C1HC13108.4°109.5°
C1C2C3119.9°120.0°
C1C2O2118.5°120.0°
HC11C1HC12108.5°109.5°
HC11C1HC13108.5°109.5°
HC12C1HC13101.5°109.4°
C3C2O2121.5°120.0°
C2C3C4117.1°109.5°
C2C3O3107.7°109.5°
C2C3HC3105.0°109.5°
C4C3O3107.9°109.5°
C4C3HC3104.7°109.4°
C3C4C5108.1°109.5°
C3C4O4108.9°109.4°
C3C4HC4110.2°109.5°
O3C3HC3114.7°109.4°
C3O3HO3107.6°106.7°
C5C4O4107.8°109.5°
C5C4HC4111.2°109.5°
C4C5O5112.6°109.5°
C4C5H51111.1°109.5°
C4C5H52111.1°109.5°
O4C4HC4110.5°109.4°
C4O4HO4108.8°106.8°
O5C5H51111.1°109.4°
O5C5H52111.1°109.5°
C5O5P112.0°106.9°
H51C5H5299.2°109.5°
O5PO2P112.7°109.5°
O5PO1P110.3°109.5°
O5PO3P110.2°109.5°
O2PPO1P109.0°109.5°
O2PPO3P105.1°109.4°
PO2PHOP2112.7°106.8°
O1PPO3P109.3°109.5°
PO1PHOP1110.3°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1HC11HC12125.3°120.0°
C2C1HC11HC13125.3°120.0°
C2C1HC12HC13114.1°120.0°
C1C2C3O2179.1°180.0°
C1C2C3C487.6°90.0°
C1C2C3O3150.6°149.9°
C1C2C3HC328.0°30.0°
HC11C1HC12HC13114.1°120.0°
HC11C1C2C3180.0°180.0°
HC11C1C2O20.8°0.0°
HC12C1C2C354.7°60.0°
HC12C1C2O2124.4°120.0°
HC13C1C2C354.7°60.0°
HC13C1C2O2126.2°120.1°
C2C3C4O3121.6°120.1°
C2C3C4HC3115.8°120.0°
C2C3O3HC3116.5°120.0°
C2C3C4C5166.3°180.0°
C2C3C4O476.8°60.0°
C2C3C4HC444.6°60.0°
C2C3O3HO3180.0°60.0°
O2C2C3C493.3°90.1°
O2C2C3O328.5°30.0°
O2C2C3HC3151.1°150.0°
C4C3O3HC3116.3°119.9°
C3C4C5O4117.6°120.0°
C3C4C5HC4121.1°120.1°
C3C4O4HC4121.2°120.0°
C3C4C5O5177.4°180.0°
C3C4C5H5157.3°60.1°
C3C4C5H5252.2°59.9°
C4C3O3HO352.7°60.1°
C3C4O4HO4180.0°60.0°
O3C3C4C572.1°59.9°
O3C3C4O444.8°60.1°
O3C3C4HC4166.2°179.9°
HC3C3C4C550.5°60.0°
HC3C3C4O4167.4°180.0°
HC3C3C4HC471.2°60.0°
HC3C3O3HO363.5°180.0°
C5C4O4HC4121.7°120.0°
C4C5O5H51125.3°120.0°
C4C5O5H52125.3°120.1°
C4C5H51H52116.9°120.1°
C5C4O4HO462.9°60.0°
C4C5O5P177.7°180.0°
O4C4C5O559.9°60.0°
O4C4C5H51174.8°180.0°
O4C4C5H5265.4°60.0°
HC4C4C5O561.5°60.0°
HC4C4C5H5163.8°60.0°
HC4C4C5H52173.3°180.0°
HC4C4O4HO458.8°179.9°
O5C5H51H52116.9°119.9°
C5O5PO2P55.3°180.0°
C5O5PO1P177.3°60.0°
C5O5PO3P61.8°60.0°
H51C5O5P57.0°60.0°
H52C5O5P52.5°60.0°
O5PO2PO1P122.8°120.0°
O5PO2PO3P120.1°120.0°
O5PO1PO3P121.4°120.0°
O5PO2PHOP2180.0°180.0°
O5PO1PHOP1180.0°60.0°
O2PPO1PO3P114.4°119.9°
O2PPO1PHOP155.8°60.0°
O1PPO2PHOP257.2°60.0°
O3PPO2PHOP259.9°60.0°
O3PPO1PHOP158.6°180.0°

219140

PDB entries from 2024-05-01

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