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DW6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CUSsing2.25Å2.21Å
SMOsing2.50Å2.27Å
MOS7'sing2.25Å2.46Å
MOS8'sing2.38Å2.47Å
MOOM2sing1.70Å1.89Å
MOOM1doub1.70Å1.71Å
N1C6sing1.37Å1.42Å
N1C1'sing1.50Å1.53Å
N1C2sing1.40Å1.40Å
C2N3sing1.36Å1.38Å
C2O2doub1.24Å1.21Å
N3C4doub1.34Å1.38Å
C4C5sing1.42Å1.46Å
C4N4sing1.33Å1.31Å
C5C6doub1.34Å1.36Å
C1'C2Dsing1.54Å1.59Å
C1'O4Dsing1.41Å1.43Å
C2DC3'sing1.54Å1.54Å
C2DO2'sing1.42Å1.46Å
C3'C4Dsing1.54Å1.50Å
C3'O3'sing1.42Å1.49Å
C4DO4Dsing1.44Å1.49Å
C4DC5'sing1.51Å1.57Å
C5'O5'sing1.45Å1.45Å
O5'PAsing1.58Å1.60Å
PAO2Adoub1.48Å1.52Å
PAO1Asing1.52Å1.51Å
PAO3Asing1.59Å1.63Å
O3APBsing1.59Å1.61Å
PBO3Bsing1.59Å1.63Å
PBO1Bdoub1.48Å1.49Å
PBO2Bsing1.52Å1.50Å
O3BC10sing1.44Å1.42Å
C10C9'sing1.53Å1.50Å
C9'C8'sing1.52Å1.55Å
C9'O9'sing1.44Å1.47Å
C8'S8'sing1.68Å1.81Å
C8'C7'doub1.35Å1.34Å
C7'C6'sing1.53Å1.58Å
C7'S7'sing1.68Å1.78Å
C6'N5'sing1.46Å1.52Å
C6'C7sing1.56Å1.49Å
C7N8'sing1.46Å1.47Å
C7O9'sing1.44Å1.41Å
N5'C4Asing1.39Å1.44Å
C4AC4Bdoub1.41Å1.37Å
C4AC4'sing1.44Å1.47Å
N8'C4Bsing1.36Å1.39Å
C4BN1'sing1.36Å1.41Å
N1'C2'doub1.34Å1.34Å
C2'N2'sing1.33Å1.36Å
C2'N3'sing1.37Å1.36Å
N3'C4'sing1.39Å1.42Å
C4'O4'doub1.23Å1.20Å
OM2H1sing0.87Å0.95Å
C5H3sing0.94Å1.08Å
C6H4sing0.94Å1.08Å
N4H5sing0.88Å1.00Å
N4H6sing0.88Å1.00Å
C1'H7sing0.99Å1.10Å
C2DH8sing0.98Å1.10Å
O2'H9sing0.84Å0.95Å
C3'H10sing0.99Å1.10Å
C4DH11sing0.99Å1.10Å
O3'H12sing0.84Å0.95Å
C5'H13sing0.99Å1.10Å
C5'H14sing0.99Å1.10Å
O1AH15sing0.89Å0.95Å
O2BH16sing0.89Å0.95Å
C10H17sing0.98Å1.10Å
C10H18sing0.98Å1.10Å
C9'H19sing0.99Å1.10Å
C6'H20sing0.99Å1.10Å
C7H21sing0.99Å1.10Å
N5'H22sing0.87Å1.00Å
N2'H25sing0.88Å1.00Å
N2'H26sing0.88Å1.00Å
N3'H27sing0.88Å1.00Å
H2N8'sing0.88Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CUSMO113.2°124.5°
SMOS7'85.9°93.6°
SMOS8'150.4°174.8°
SMOOM295.7°90.3°
SMOOM1107.5°89.8°
S7'MOS8'79.3°81.3°
S7'MOOM2151.3°175.8°
S7'MOOM1101.7°89.1°
MOS7'C7'108.0°103.9°
S8'MOOM285.9°94.8°
S8'MOOM1100.6°89.9°
MOS8'C8'109.8°102.8°
OM2MOOM1105.1°89.3°
MOOM2H1109.5°109.8°
C6N1C1'117.9°122.1°
C6N1C2125.5°119.6°
N1C6C5117.9°121.7°
N1C6H4121.1°118.9°
C1'N1C2116.1°118.3°
N1C1'C2D109.0°113.3°
N1C1'O4D105.7°109.4°
N1C1'H7112.6°109.5°
N1C2N3113.1°119.0°
N1C2O2119.8°119.9°
N3C2O2126.7°121.2°
C2N3C4126.0°121.0°
N3C4C5117.5°120.9°
N3C4N4121.8°118.0°
C5C4N4120.4°121.1°
C4C5C6119.8°117.8°
C4C5H3120.1°121.2°
C4N4H5120.0°120.0°
C4N4H6120.0°120.6°
C6C5H3120.1°121.0°
C5C6H4121.1°119.3°
C2DC1'O4D103.1°108.6°
C1'C2DC3'102.0°102.6°
C1'C2DO2'105.9°109.5°
C2DC1'H7111.7°108.0°
C1'C2DH8109.5°110.0°
C1'O4DC4D111.0°110.1°
O4DC1'H7114.2°107.9°
C3'C2DO2'117.6°114.5°
C2DC3'C4D104.6°103.1°
C2DC3'O3'105.3°112.0°
C3'C2DH8110.0°109.9°
C2DC3'H10111.8°109.2°
O2'C2DH8111.2°110.1°
C2DO2'H9109.5°110.8°
C4DC3'O3'109.5°111.3°
C3'C4DO4D106.5°104.4°
C3'C4DC5'111.8°116.0°
C4DC3'H10112.5°111.1°
C3'C4DH11110.1°109.4°
O3'C3'H10112.6°109.9°
C3'O3'H12109.5°110.8°
O4DC4DC5'108.9°110.1°
O4DC4DH11110.3°108.9°
C4DC5'O5'106.6°109.3°
C5'C4DH11109.2°107.9°
C4DC5'H13110.2°109.5°
C4DC5'H14110.2°109.8°
C5'O5'PA121.0°122.9°
O5'C5'H13110.2°109.8°
O5'C5'H14110.2°109.9°
O5'PAO2A110.2°115.1°
O5'PAO1A105.1°107.8°
O5'PAO3A105.0°104.1°
O2APAO1A120.3°114.2°
O2APAO3A103.5°109.6°
O1APAO3A111.9°105.1°
PAO1AH15109.5°113.2°
PAO3APB129.5°132.1°
O3APBO3B99.1°102.7°
O3APBO1B109.1°109.3°
O3APBO2B107.7°104.0°
O3BPBO1B110.0°115.0°
O3BPBO2B107.5°110.3°
PBO3BC10122.9°124.5°
O1BPBO2B121.1°114.2°
PBO2BH16109.5°113.8°
O3BC10C9'104.2°109.7°
O3BC10H17110.8°110.1°
O3BC10H18110.8°110.0°
C10C9'C8'106.3°113.9°
C10C9'O9'110.3°106.8°
C9'C10H17110.8°109.5°
C9'C10H18110.8°109.5°
C10C9'H19112.3°108.5°
C8'C9'O9'103.3°112.4°
C9'C8'S8'116.7°120.0°
C9'C8'C7'126.3°121.7°
C8'C9'H19111.5°106.6°
C9'O9'C7114.9°119.7°
O9'C9'H19112.7°108.6°
S8'C8'C7'116.6°118.3°
C8'C7'C6'120.6°122.6°
C8'C7'S7'123.7°120.8°
C6'C7'S7'115.6°116.5°
C7'C6'N5'102.3°111.2°
C7'C6'C7105.1°111.9°
C7'C6'H20110.9°107.2°
N5'C6'C7113.8°112.2°
C6'N5'C4A106.8°122.3°
N5'C6'H20111.7°107.7°
C6'N5'H22110.2°119.6°
C6'C7N8'108.9°112.7°
C6'C7O9'112.5°110.3°
C7C6'H20112.3°106.2°
C6'C7H21108.8°108.8°
N8'C7O9'107.8°108.7°
C7N8'C4B117.9°122.8°
N8'C7H21109.0°107.6°
C7N8'H2107.3°119.0°
O9'C7H21109.7°108.8°
N5'C4AC4B127.5°119.4°
N5'C4AC4'113.8°121.3°
C4AN5'H22110.1°118.1°
C4BC4AC4'118.6°119.2°
C4AC4BN8'118.9°121.1°
C4AC4BN1'126.6°122.3°
C4AC4'N3'111.8°114.9°
C4AC4'O4'127.3°125.3°
N8'C4BN1'114.2°116.5°
C4BN8'H2107.3°118.2°
C4BN1'C2'113.7°118.0°
N1'C2'N2'117.2°119.1°
N1'C2'N3'123.5°123.0°
N2'C2'N3'119.1°117.9°
C2'N2'H25120.0°120.2°
C2'N2'H26120.0°120.6°
C2'N3'C4'125.4°122.5°
C2'N3'H27117.3°119.1°
N3'C4'O4'120.9°119.8°
C4'N3'H27117.3°118.4°
H5N4H6120.0°119.3°
H13C5'H14109.5°108.4°
H17C10H18109.5°107.9°
H25N2'H26120.0°119.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CUSMOS7'137.2°4.2°
CUSMOS8'77.5°2.2°
CUSMOOM214.1°174.1°
CUSMOOM1121.9°84.9°
SMOS7'S8'154.2°179.8°
SMOS7'OM294.2°156.8°
SMOS7'OM1107.0°89.8°
SMOS8'OM294.2°176.3°
SMOS8'OM1161.2°87.0°
SMOOM2OM1109.9°89.8°
SMOS8'C8'75.2°25.4°
SMOS7'C7'166.9°149.5°
SMOOM2H1109.9°35.0°
S7'MOS8'OM2155.3°178.3°
S7'MOS8'OM1100.0°89.1°
S7'MOOM2OM1158.4°67.0°
S7'MOS8'C8'14.1°27.4°
MOS7'C7'C8'9.9°31.6°
MOS7'C7'C6'165.8°145.4°
S7'MOOM2H1158.4°168.2°
S8'MOOM2OM199.9°89.8°
MOS8'C8'C9'172.5°160.8°
MOS8'C8'C7'13.7°18.5°
S8'MOS7'C7'12.6°30.3°
S8'MOOM2H199.8°145.4°
OM2MOS8'C8'169.4°150.9°
OM2MOS7'C7'72.7°7.3°
OM1MOS8'C8'86.0°61.7°
OM1MOS7'C7'86.1°59.7°
OM1MOOM2H10.0°124.8°
C6N1C1'C2172.3°179.4°
C6N1C2N34.8°0.4°
C6N1C2O2167.9°179.7°
N1C6C5C43.2°0.2°
N1C6C5H4180.0°180.0°
C6N1C1'C2D61.2°85.8°
C6N1C1'O4D48.9°35.6°
N1C6C5H3176.8°179.8°
C6N1C1'H7174.3°153.6°
C1'N1C2N3166.9°179.9°
C1'N1C2O220.5°0.3°
C1'N1C6C5170.0°179.8°
N1C1'C2DO4D111.9°121.8°
N1C1'C2DH7125.0°121.5°
N1C1'O4DH7124.3°119.0°
N1C1'C2DC3'146.6°108.4°
N1C1'C2DO2'89.9°129.7°
N1C1'O4DC4D138.2°132.2°
C1'N1C6H410.0°0.2°
N1C1'C2DH830.1°8.5°
N1C2N3O2172.0°179.9°
N1C2N3C43.5°0.2°
C2N1C6C51.5°0.4°
C2N1C1'C2D111.1°93.7°
C2N1C1'O4D138.8°145.0°
C2N1C6H4178.5°179.6°
C2N1C1'H713.4°26.9°
C2N3C4C50.7°0.0°
C2N3C4N4173.1°180.0°
O2C2N3C4168.5°179.9°
N3C4C5N4173.9°180.0°
N3C4C5C64.3°0.0°
N3C4C5H3175.7°180.0°
N3C4N4H50.0°0.0°
N3C4N4H6180.0°179.9°
C4C5C6H3180.0°180.0°
C4C5C6H4176.8°179.8°
C5C4N4H5173.6°180.0°
C5C4N4H66.4°0.1°
N4C4C5C6169.6°180.0°
N4C4C5H310.4°0.0°
C4N4H5H6180.0°179.9°
C2DC1'O4DH7121.4°116.8°
C1'C2DC3'O2'115.2°118.5°
C1'C2DC3'H8116.1°117.0°
C1'C2DO2'H8118.8°121.1°
C1'C2DC3'C4D33.0°28.1°
C1'C2DC3'O3'82.4°147.9°
C2DC1'O4DC4D23.9°8.1°
C1'C2DO2'H9180.0°172.3°
C1'C2DC3'H10155.0°90.2°
O4DC1'C2DC3'34.7°13.4°
O4DC1'C2DO2'158.2°108.6°
C1'O4DC4DC3'3.2°26.4°
C1'O4DC4DC5'123.9°151.5°
O4DC1'C2DH881.8°130.3°
C1'O4DC4DH11116.2°90.4°
C3'C2DO2'H8128.1°124.4°
C2DC3'C4DO3'112.4°120.2°
C2DC3'C4DH10121.6°116.9°
C2DC3'O3'H10122.1°121.5°
C2DC3'C4DO4D19.7°33.6°
C2DC3'C4DC5'99.1°154.9°
C3'C2DC1'H788.3°130.2°
C3'C2DO2'H967.0°73.2°
C2DC3'C4DH11139.3°82.8°
C2DC3'O3'H12180.0°169.7°
O2'C2DC3'C4D148.2°90.5°
O2'C2DC3'O3'32.8°29.3°
O2'C2DC1'H735.1°8.2°
O2'C2DC3'H1089.8°151.3°
C4DC3'O3'H10125.9°123.6°
C3'C4DO4DC5'120.7°125.1°
C3'C4DO4DH11119.5°116.7°
C3'C4DC5'H11122.1°123.1°
C3'C4DC5'O5'39.7°169.9°
C4DC3'C2DH883.1°145.0°
C4DC3'O3'H1268.0°75.4°
C3'C4DC5'H13159.3°69.8°
C3'C4DC5'H1479.8°49.2°
O3'C3'C4DO4D92.7°153.8°
O3'C3'C4DC5'148.5°84.9°
O3'C3'C2DH8161.5°95.2°
O3'C3'C4DH1126.9°37.4°
O4DC4DC5'H11120.5°118.7°
O4DC4DC5'O5'77.6°71.9°
C4DO4DC1'H797.4°108.7°
O4DC4DC3'H10141.3°83.3°
O4DC4DC5'H1341.9°48.4°
O4DC4DC5'H14162.8°167.4°
C4DC5'O5'H13119.5°120.2°
C4DC5'O5'H14119.5°120.7°
C4DC5'O5'PA165.9°118.2°
C5'C4DC3'H1022.5°38.0°
C4DC5'H13H14121.3°119.8°
C5'O5'PAO2A63.4°52.0°
C5'O5'PAO1A165.7°179.2°
C5'O5'PAO3A47.5°67.9°
O5'C5'C4DH11161.8°46.8°
O5'C5'H13H14121.4°120.1°
O5'PAO2AO1A122.4°125.5°
O5'PAO2AO3A111.9°116.9°
O5'PAO1AO3A113.5°110.6°
O5'PAO3APB65.0°71.5°
PAO5'C5'H1346.4°121.6°
PAO5'C5'H1474.5°2.4°
O5'PAO1AH15124.8°179.9°
O2APAO1AO3A121.7°120.1°
O2APAO3APB179.4°164.9°
O2APAO1AH150.0°50.8°
O1APAO3APB48.5°41.8°
PAO3APBO3B158.9°52.5°
PAO3APBO1B86.0°175.0°
PAO3APBO2B47.1°62.6°
O3APAO1AH15121.7°69.3°
O3APBO3BO1B114.3°118.6°
O3APBO3BO2B111.9°110.4°
O3APBO1BO2B125.8°116.1°
O3APBO3BC1094.2°155.8°
O3APBO2BH16126.4°173.1°
O3BPBO1BO2B126.4°129.1°
PBO3BC10C9'129.6°99.4°
O3BPBO2BH16127.6°77.4°
PBO3BC10H17111.2°140.1°
PBO3BC10H1810.5°21.2°
O1BPBO3BC1020.1°85.6°
O1BPBO2BH160.0°54.0°
O2BPBO3BC10153.9°45.4°
O3BC10C9'H17119.2°121.0°
O3BC10C9'H18119.2°120.9°
O3BC10C9'C8'162.3°99.7°
O3BC10C9'O9'51.0°135.6°
O3BC10H17H18122.4°120.1°
O3BC10C9'H1975.6°18.8°
C10C9'C8'O9'116.1°121.6°
C10C9'C8'H19122.6°119.6°
C10C9'O9'H19126.4°116.8°
C10C9'C8'S8'50.4°57.5°
C10C9'C8'C7'136.4°123.2°
C10C9'O9'C7164.2°162.6°
C9'C10H17H18122.4°119.1°
C8'C9'O9'H19120.4°117.6°
C9'C8'S8'C7'173.9°179.3°
C9'C8'C7'C6'8.8°10.5°
C9'C8'C7'S7'175.7°172.7°
C8'C9'O9'C751.0°37.1°
C8'C9'C10H1743.1°21.3°
C8'C9'C10H1878.6°139.4°
O9'C9'C8'S8'166.5°179.0°
O9'C9'C8'C7'20.3°1.7°
C9'O9'C7C6'74.6°56.3°
C9'O9'C7N8'165.3°179.8°
O9'C9'C10H1768.2°103.4°
O9'C9'C10H18170.1°14.8°
C9'O9'C7H2146.6°62.9°
S8'C8'C7'C6'178.0°168.8°
S8'C8'C7'S7'2.5°8.0°
S8'C8'C9'H1972.2°62.1°
C8'C7'C6'S7'175.8°176.9°
C8'C7'C6'N5'97.0°117.4°
C8'C7'C6'C722.1°8.9°
C7'C8'C9'H19101.0°117.2°
C8'C7'C6'H20143.7°125.1°
C7'C6'N5'C7112.8°126.2°
C7'C6'N5'H20118.7°117.2°
C7'C6'C7H20120.7°116.7°
C7'C6'C7N8'171.5°160.8°
C7'C6'C7O9'52.0°39.2°
C7'C6'N5'C4A158.1°155.4°
C7'C6'C7H2169.9°80.0°
C7'C6'N5'H2238.5°24.8°
S7'C7'C6'N5'78.8°65.7°
S7'C7'C6'C7162.0°168.0°
S7'C7'C6'H2040.4°51.9°
N5'C6'C7H20128.2°117.5°
N5'C6'C7N8'60.3°35.0°
N5'C6'C7O9'59.2°86.6°
C6'N5'C4AH22119.6°179.8°
C6'N5'C4AC4B10.9°9.9°
C6'N5'C4AC4'171.2°166.7°
N5'C6'C7H21179.0°154.2°
C6'C7N8'O9'122.4°122.5°
C6'C7N8'H21118.5°119.9°
C6'C7O9'H21121.3°119.2°
C7C6'N5'C4A45.3°29.2°
C6'C7N8'C4B39.3°25.5°
C7C6'N5'H2274.3°151.0°
C6'C7N8'H281.9°154.2°
N8'C7O9'H21118.6°116.9°
C7N8'C4BC4A6.8°5.9°
C7N8'C4BH2121.2°179.7°
C7N8'C4BN1'166.4°171.2°
N8'C7C6'H2067.9°82.5°
O9'C7N8'C4B83.1°97.0°
C7O9'C9'H1969.5°80.6°
O9'C7C6'H20172.6°155.9°
O9'C7N8'H2155.7°83.3°
N5'C4AC4BC4'177.8°176.7°
N5'C4AC4BN8'8.5°3.5°
N5'C4AC4BN1'179.3°179.5°
N5'C4AC4'N3'177.4°178.7°
N5'C4AC4'O4'1.6°2.2°
C4AN5'C6'H2083.2°87.4°
C4AC4BN8'N1'173.1°177.1°
C4AC4BN1'C2'1.4°2.1°
C4BC4AC4'N3'0.7°2.1°
C4BC4AC4'O4'179.7°178.8°
C4BC4AN5'H22108.7°170.2°
C4AC4BN8'H2114.4°173.8°
C4'C4AC4BN8'169.3°179.8°
C4'C4AC4BN1'2.9°2.8°
C4AC4'N3'C2'6.0°0.8°
C4AC4'N3'O4'179.1°179.2°
C4'C4AN5'H2269.2°13.2°
C4AC4'N3'H27174.0°179.3°
N8'C4BN1'C2'171.1°179.2°
C4BN8'C7H21157.8°145.4°
C4BN1'C2'N2'178.9°179.4°
C4BN1'C2'N3'4.0°0.7°
N1'C4BN8'H272.4°9.1°
N1'C2'N2'N3'175.1°179.9°
N1'C2'N3'C4'8.2°0.1°
N1'C2'N2'H250.0°0.1°
N1'C2'N2'H26180.0°180.0°
N1'C2'N3'H27171.8°180.0°
N2'C2'N3'C4'177.0°180.0°
C2'N2'H25H26180.0°179.9°
N2'C2'N3'H273.0°0.1°
C2'N3'C4'H27180.0°179.9°
C2'N3'C4'O4'174.9°180.0°
N3'C2'N2'H25175.1°180.0°
N3'C2'N2'H264.8°0.1°
O4'C4'N3'H275.1°0.1°
H3C5C6H43.2°0.2°
H7C1'C2DH8155.1°113.0°
H8C2DO2'H961.2°51.2°
H8C2DC3'H1038.9°26.8°
H10C3'C4DH1199.1°160.3°
H10C3'O3'H1257.9°48.2°
H11C4DC5'H1378.6°167.2°
H11C4DC5'H1442.3°73.9°
H17C10C9'H19165.2°139.8°
H18C10C9'H1943.5°102.1°
H20C6'C7H2150.8°36.7°
H20C6'N5'H22157.2°92.4°
H21C7N8'H236.6°34.3°

258735

PDB entries from 2026-08-26

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