Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

DVX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
F43C40sing1.40Å1.36Å
F41C40sing1.40Å1.33Å
C40C39sing1.51Å1.56Å
C40F42sing1.40Å1.34Å
C39C44doub1.38Å1.40ÅAromatic
C39C38sing1.38Å1.39ÅAromatic
O30C28doub1.22Å1.15Å
C44C45sing1.38Å1.40ÅAromatic
C38C37doub1.38Å1.40ÅAromatic
C45C36doub1.39Å1.40ÅAromatic
C28C27sing1.47Å1.52Å
C28N29sing1.35Å1.45Å
C37C36sing1.39Å1.38ÅAromatic
C36C35sing1.48Å1.42Å
F26C25sing1.35Å1.35Å
C27C25doub1.40Å1.38ÅAromatic
C27C31sing1.40Å1.38ÅAromatic
F32C31sing1.35Å1.35Å
C25C24sing1.38Å1.38ÅAromatic
C35N34sing1.36Å1.32ÅAromatic
C35C46doub1.36Å1.37ÅAromatic
N34C33doub1.30Å1.32ÅAromatic
C31C22doub1.39Å1.37ÅAromatic
C24C23doub1.38Å1.39ÅAromatic
C22C23sing1.39Å1.38ÅAromatic
C22O21sing1.36Å1.38Å
C46O48sing1.35Å1.31ÅAromatic
C46BR1sing1.89Å1.91Å
C33C20sing1.51Å1.54Å
C33O48sing1.34Å1.31ÅAromatic
O21C20sing1.43Å1.39Å
C20C19sing1.53Å1.52Å
C19O18sing1.45Å1.40Å
O18C16sing1.34Å1.39Å
C16C15sing1.51Å1.53Å
C16O17doub1.21Å1.17Å
C15C14sing1.53Å1.55Å
C12C10sing1.39Å1.40ÅAromatic
C12C13doub1.36Å1.39ÅAromatic
C10C09doub1.39Å1.41ÅAromatic
C14C13sing1.51Å1.54Å
C13N49sing1.34Å1.35ÅAromatic
C09N49sing1.38Å1.33ÅAromatic
C09C08sing1.39Å1.54Å
N49B50sing1.52Å1.43Å
C08C07doub1.40Å1.52Å
F51B50sing1.37Å1.64Å
B50F52sing1.37Å1.64Å
B50N06sing1.52Å1.40Å
C07N06sing1.35Å1.35Å
C07C02sing1.42Å1.55Å
N06C04doub1.31Å1.42Å
C02C01sing1.51Å1.53Å
C02C03doub1.37Å1.59Å
C04C03sing1.40Å1.56Å
C04C05sing1.51Å1.51Å
C10H1sing1.08Å1.08Å
C12H2sing1.08Å1.08Å
C14H3sing1.09Å1.10Å
C14H4sing1.09Å1.10Å
C15H5sing1.09Å1.10Å
C15H6sing1.09Å1.10Å
C19H7sing1.09Å1.10Å
C19H8sing1.09Å1.10Å
C20H9sing1.09Å1.10Å
C23H10sing1.08Å1.08Å
C24H11sing1.08Å1.08Å
C01H12sing1.09Å1.10Å
C01H13sing1.09Å1.10Å
C01H14sing1.09Å1.10Å
C03H15sing1.08Å1.08Å
C05H16sing1.09Å1.10Å
C05H17sing1.09Å1.10Å
C05H18sing1.09Å1.10Å
C08H19sing1.08Å1.08Å
C37H21sing1.08Å1.08Å
C38H22sing1.08Å1.08Å
C44H23sing1.08Å1.08Å
C45H24sing1.08Å1.08Å
N29H25sing0.97Å1.00Å
N29H26sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
F43C40F41107.8°109.5°
F43C40C39104.0°109.5°
F43C40F42113.3°109.4°
F41C40C39118.8°109.5°
F41C40F4298.9°109.5°
C39C40F42114.3°109.5°
C40C39C44124.2°119.9°
C40C39C38119.0°119.9°
C44C39C38116.8°120.3°
C39C44C45121.6°120.2°
C39C44H23119.2°119.9°
C39C38C37121.7°120.1°
C39C38H22119.2°120.0°
O30C28C27116.5°120.0°
O30C28N29120.7°119.9°
C44C45C36120.7°119.8°
C45C44H23119.2°119.9°
C44C45H24119.7°120.1°
C38C37C36121.4°119.9°
C38C37H21119.3°120.1°
C37C38H22119.1°119.9°
C45C36C37117.8°119.8°
C45C36C35123.1°120.1°
C36C45H24119.6°120.0°
C27C28N29122.8°120.0°
C28C27C25118.5°120.1°
C28C27C31121.5°120.2°
C28N29H25120.0°120.0°
C28N29H26120.0°120.0°
C37C36C35119.1°120.1°
C36C37H21119.3°120.1°
C36C35N34126.4°126.4°
C36C35C46129.0°126.4°
F26C25C27118.9°120.1°
F26C25C24120.4°120.0°
C25C27C31120.0°119.7°
C27C25C24120.8°119.9°
C27C31F32122.1°120.1°
C27C31C22119.0°119.8°
F32C31C22119.0°120.1°
C25C24C23119.6°120.2°
C25C24H11120.2°119.9°
N34C35C46104.6°107.2°
C35N34C33110.6°108.6°
C35C46O48108.2°107.0°
C35C46BR1133.2°126.5°
N34C33C20130.8°125.5°
N34C33O48107.3°109.1°
C31C22C23122.0°120.1°
C31C22O21115.7°120.0°
C24C23C22118.7°120.3°
C24C23H10120.6°119.8°
C23C24H11120.2°119.9°
C23C22O21122.3°119.9°
C22C23H10120.7°119.9°
C22O21C20118.8°117.0°
O48C46BR1118.6°126.5°
C46O48C33109.3°108.1°
C20C33O48121.9°125.4°
C33C20O21101.5°109.5°
C33C20C19114.8°109.4°
C33C20H9112.1°109.5°
O21C20C19100.3°109.5°
O21C20H9114.7°109.5°
C20C19O18104.0°109.5°
C20C19H7110.8°109.5°
C20C19H8110.8°109.5°
C19C20H9112.5°109.5°
C19O18C16113.8°117.0°
O18C19H7110.8°109.5°
O18C19H8110.8°109.5°
O18C16C15118.1°120.0°
O18C16O17119.8°120.0°
C15C16O17122.1°120.0°
C16C15C14113.4°109.5°
C16C15H5108.5°109.5°
C16C15H6108.5°109.5°
C15C14C13111.5°109.5°
C15C14H3109.0°109.5°
C15C14H4108.9°109.4°
C14C15H5108.5°109.4°
C14C15H6108.5°109.4°
C10C12C13105.8°108.0°
C12C10C09106.9°106.9°
C12C10H1126.5°126.5°
C10C12H2127.1°126.0°
C12C13C14124.7°125.5°
C12C13N49109.8°109.1°
C13C12H2127.1°126.0°
C10C09N49108.5°107.0°
C10C09C08129.9°132.3°
C09C10H1126.6°126.5°
C14C13N49125.5°125.5°
C13C14H3108.9°109.5°
C13C14H4109.0°109.5°
C13N49C09109.0°109.0°
C13N49B50125.2°132.8°
N49C09C08121.6°120.8°
C09N49B50125.8°118.2°
C09C08C07106.9°123.3°
C09C08H19126.5°118.3°
N49B50F51108.7°107.9°
N49B50F52109.8°107.9°
N49B50N06118.3°117.2°
C08C07N06130.5°121.6°
C08C07C02116.1°131.0°
C07C08H19126.5°118.3°
F51B50F52106.8°107.7°
F51B50N06108.5°107.9°
F52B50N06104.1°107.9°
B50N06C07116.7°118.9°
B50N06C04129.3°131.3°
N06C07C02113.4°107.5°
C07N06C04113.9°109.8°
C07C02C01131.4°126.8°
C07C02C0399.4°106.5°
N06C04C03105.2°109.1°
N06C04C05128.2°125.4°
C01C02C03129.2°126.7°
C02C01H12109.5°109.5°
C02C01H13109.5°109.5°
C02C01H14109.5°109.5°
C02C03C04108.1°107.1°
C02C03H15126.0°126.4°
C03C04C05126.6°125.4°
C04C03H15125.9°126.5°
C04C05H16109.5°109.4°
C04C05H17109.5°109.5°
C04C05H18109.5°109.4°
H3C14H4109.5°109.5°
H5C15H6109.4°109.5°
H7C19H8109.5°109.4°
H12C01H13109.5°109.5°
H12C01H14109.4°109.5°
H13C01H14109.5°109.4°
H16C05H17109.5°109.5°
H16C05H18109.5°109.5°
H17C05H18109.4°109.5°
H25N29H26120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
F43C40F41C39117.8°120.0°
F43C40F41F42118.1°120.0°
F43C40C39F42124.1°120.0°
F43C40C39C4497.6°150.0°
F43C40C39C3880.7°30.3°
F41C40C39F42116.2°120.0°
F41C40C39C4422.2°30.0°
F41C40C39C38159.6°150.3°
C40C39C44C38178.3°179.7°
C40C39C44C45179.1°180.0°
C40C39C38C37179.9°179.8°
C40C39C38H220.1°0.3°
C40C39C44H230.8°0.3°
F42C40C39C44138.4°90.0°
F42C40C39C3843.4°89.7°
C39C44C45H23180.0°179.7°
C44C39C38C371.5°0.1°
C39C44C45C360.4°0.6°
C44C39C38H22178.5°180.0°
C39C44C45H24179.6°180.0°
C38C39C44C450.9°0.3°
C39C38C37H22180.0°180.0°
C39C38C37C361.7°0.1°
C39C38C37H21178.3°180.0°
C38C39C44H23179.1°180.0°
O30C28C27N29178.2°179.9°
O30C28C27C2553.0°90.0°
O30C28C27C31127.0°89.7°
O30C28N29H250.0°180.0°
O30C28N29H26180.0°0.1°
C44C45C36H24180.0°179.3°
C44C45C36C370.5°0.7°
C44C45C36C35179.7°179.7°
C38C37C36C451.1°0.4°
C38C37C36H21180.0°179.9°
C38C37C36C35179.6°180.0°
C45C36C37C35179.3°179.6°
C45C36C35N34152.8°35.3°
C45C36C35C4629.0°144.9°
C45C36C37H21178.9°179.7°
C36C45C44H23179.6°179.7°
C28C27C25F260.5°0.1°
C28C27C25C31180.0°179.7°
C28C27C31F320.6°0.3°
C28C27C25C24179.8°180.0°
C28C27C31C22179.7°179.7°
C27C28N29H25178.1°0.1°
C27C28N29H261.9°180.0°
N29C28C27C25125.2°90.0°
N29C28C27C3154.8°90.2°
C28N29H25H26180.0°179.9°
C37C36C35N3428.0°145.0°
C37C36C35C46150.2°34.7°
C36C37C38H22178.3°179.9°
C37C36C45H24179.5°180.0°
C36C35N34C46178.5°179.8°
C36C35N34C33178.8°180.0°
C36C35C46O48179.2°179.8°
C36C35C46BR11.0°0.2°
C35C36C37H210.4°0.1°
C35C36C45H240.3°0.4°
F26C25C27C24179.3°180.0°
F26C25C27C31179.5°179.8°
F26C25C24C23179.8°179.9°
F26C25C24H110.2°0.0°
C25C27C31F32179.4°180.0°
C25C27C31C220.3°0.6°
C27C25C24C230.5°0.1°
C27C25C24H11179.5°180.0°
C27C31F32C22179.1°179.4°
C31C27C25C240.2°0.2°
C27C31C22C230.6°0.6°
C27C31C22O21179.7°179.7°
F32C31C22C23179.7°180.0°
F32C31C22O211.2°0.3°
C25C24C23H11180.0°179.9°
C25C24C23C220.2°0.0°
C25C24C23H10179.8°180.0°
N34C35C46O480.7°0.0°
N34C35C46BR1179.4°180.0°
C35N34C33C20177.9°180.0°
C35N34C33O480.3°0.3°
C46C35N34C330.3°0.2°
C35C46O48BR1179.9°180.0°
C35C46O48C330.9°0.1°
N34C33O48C460.7°0.3°
N34C33C20O48177.4°179.7°
N34C33C20O21143.3°134.7°
N34C33C20C19109.5°105.3°
N34C33C20H920.4°14.7°
C31C22C23C240.3°0.3°
C31C22C23O21179.0°179.7°
C31C22O21C20164.3°174.5°
C31C22C23H10179.7°179.7°
C24C23C22H10180.0°180.0°
C24C23C22O21179.3°180.0°
C23C22O21C2016.6°5.7°
C22C23C24H11179.7°180.0°
C22O21C20C33157.5°145.4°
C22O21C20C1984.3°94.6°
C22O21C20H936.5°25.4°
O21C22C23H100.7°0.0°
C46O48C33C20178.6°180.0°
BR1C46O48C33179.2°179.9°
C33C20O21C19118.2°120.0°
C33C20O21H9121.1°120.0°
C33C20C19H9129.8°120.0°
C33C20C19O1860.1°175.0°
C33C20C19H759.0°55.0°
C33C20C19H8179.2°65.0°
O48C33C20O2134.1°45.0°
O48C33C20C1973.1°75.0°
O48C33C20H9157.0°165.0°
O21C20C19H9122.4°120.1°
O21C20C19O18168.0°65.0°
O21C20C19H748.9°174.9°
O21C20C19H872.9°55.0°
C20C19O18H7119.1°120.0°
C20C19O18H8119.1°120.0°
C20C19O18C16161.2°180.0°
C20C19H7H8122.6°120.0°
C19O18C16C15149.0°180.0°
C19O18C16O1731.9°0.0°
O18C19H7H8122.5°120.0°
O18C19C20H969.7°55.1°
O18C16C15O17179.0°180.0°
O18C16C15C14151.1°180.0°
O18C16C15H588.3°60.1°
O18C16C15H630.6°60.0°
C16O18C19H779.7°60.0°
C16O18C19H842.1°60.0°
C16C15C14H5120.6°120.0°
C16C15C14H6120.6°120.0°
C16C15C14C13179.6°180.0°
C16C15C14H360.1°60.0°
C16C15C14H459.3°60.0°
C16C15H5H6118.2°120.1°
O17C16C15C1427.9°0.0°
O17C16C15H592.7°119.9°
O17C16C15H6148.5°120.0°
C15C14C13C1232.7°84.9°
C15C14C13H3120.3°120.0°
C15C14C13H4120.3°120.0°
C15C14C13N49147.7°95.0°
C15C14H3H4119.0°119.9°
C14C15H5H6118.2°119.9°
C10C12C13H2180.0°179.9°
C12C10C09H1180.0°179.8°
C10C12C13C14179.7°180.0°
C10C12C13N490.7°0.1°
C12C10C09N490.8°0.0°
C12C10C09C08179.4°179.7°
C13C12C10C090.9°0.0°
C12C13C14N49179.6°179.9°
C12C13N49C090.2°0.1°
C12C13N49B50179.5°180.0°
C13C12C10H1179.2°179.8°
C12C13C14H387.6°155.1°
C12C13C14H4153.0°35.1°
C10C09N49C130.4°0.1°
C10C09N49C08179.8°179.7°
C10C09N49B50179.9°180.0°
C10C09C08C07180.0°179.9°
C09C10C12H2179.1°179.9°
C10C09C08H190.0°0.1°
C14C13N49C09179.8°180.0°
C14C13N49B500.1°0.1°
C14C13C12H20.3°0.1°
C13C14H3H4119.0°120.0°
C13C14C15H559.0°60.0°
C13C14C15H659.8°60.0°
C13N49C09B50179.7°180.0°
C13N49C09C08179.8°179.8°
C13N49B50F5155.4°58.1°
C13N49B50F5261.1°58.0°
C13N49B50N06179.7°180.0°
N49C13C12H2179.3°180.0°
N49C13C14H392.0°25.1°
N49C13C14H427.4°145.1°
N49C09C08C070.2°0.3°
C09N49B50F51124.9°121.9°
C09N49B50F52118.6°121.9°
C09N49B50N060.7°0.0°
N49C09C10H1179.3°179.8°
N49C09C08H19179.7°179.7°
C08C09N49B500.1°0.2°
C09C08C07H19180.0°180.0°
C09C08C07N061.1°0.1°
C09C08C07C02179.5°179.8°
C08C09C10H10.5°0.1°
N49B50F51F52118.4°116.2°
N49B50F51N06129.9°127.5°
N49B50F52N06127.6°127.5°
N49B50N06C071.3°0.2°
N49B50N06C04179.6°179.9°
C08C07N06B501.7°0.2°
C08C07N06C02178.4°179.9°
C08C07N06C04179.8°180.0°
C08C07C02C010.1°0.0°
C08C07C02C03179.5°179.9°
F51B50F52N06114.7°116.2°
F51B50N06C07125.7°121.7°
F51B50N06C0456.1°58.0°
F52B50N06C07120.8°122.1°
F52B50N06C0457.4°58.1°
B50N06C07C04178.5°179.8°
B50N06C07C02179.9°180.0°
B50N06C04C03179.4°180.0°
B50N06C04C051.6°0.1°
N06C07C02C01178.8°179.9°
N06C07C02C030.9°0.0°
C07N06C04C031.2°0.2°
C07N06C04C05179.8°179.9°
N06C07C08H19178.8°179.9°
C02C07N06C041.4°0.1°
C07C02C01C03179.6°179.9°
C07C02C03C040.2°0.1°
C07C02C01H12180.0°180.0°
C07C02C01H1360.0°60.0°
C07C02C01H1460.0°59.9°
C07C02C03H15179.8°179.9°
C02C07C08H190.5°0.2°
N06C04C03C020.5°0.2°
N06C04C03C05179.0°179.9°
N06C04C03H15179.5°179.8°
N06C04C05H16180.0°180.0°
N06C04C05H1760.0°60.0°
N06C04C05H1860.0°60.1°
C01C02C03C04179.5°180.0°
C02C01H12H13120.0°120.0°
C02C01H12H14120.0°120.0°
C02C01H13H14120.0°120.0°
C01C02C03H150.5°0.0°
C02C03C04H15180.0°180.0°
C02C03C04C05179.6°179.9°
C03C02C01H120.4°0.0°
C03C02C01H13119.6°120.1°
C03C02C01H14120.4°120.0°
C03C04C05H161.2°0.1°
C03C04C05H17121.2°119.9°
C03C04C05H18118.8°120.0°
C05C04C03H150.5°0.1°
C04C05H16H17120.0°120.0°
C04C05H16H18120.0°119.9°
C04C05H17H18120.0°120.0°
H1C10C12H20.8°0.2°
H3C14C15H5179.3°180.0°
H3C14C15H660.5°60.0°
H4C14C15H561.3°60.0°
H4C14C15H6179.9°NaN°
H7C19C20H9171.2°65.0°
H8C19C20H949.4°175.0°
H10C23C24H110.2°0.1°
H12C01H13H14120.0°120.0°
H16C05H17H18120.0°120.0°
H21C37C38H221.7°0.1°
H23C44C45H240.4°0.4°

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon