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SummaryGeometryRelated PDB entries

DVU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C41O42doub1.21Å1.19Å
C41N40sing1.35Å1.48Å
N40C18sing1.46Å1.47Å
C18C15sing1.51Å1.55Å
C15C16doub1.38Å1.52ÅAromatic
C15C14sing1.38Å1.55ÅAromatic
C16C17sing1.38Å1.56ÅAromatic
C05N06doub1.30Å1.44Å
C05N04sing1.36Å1.45Å
C14C13doub1.38Å1.55ÅAromatic
N06C01sing1.35Å1.51Å
C17C12doub1.40Å1.55ÅAromatic
C19N04sing1.47Å1.52Å
C19C20sing1.53Å1.57Å
C13C12sing1.40Å1.53ÅAromatic
N04C03sing1.35Å1.45Å
C12C07sing1.48Å1.58Å
O26C20sing1.43Å1.47Å
C01C07doub1.39Å1.40ÅAromatic
C01C02sing1.47Å1.35ÅAromatic
C07N08sing1.36Å1.37ÅAromatic
C25C20sing1.53Å1.46Å
C25C24sing1.53Å1.54Å
C20C21sing1.53Å1.45Å
C03C02sing1.47Å1.52Å
C03O10doub1.22Å1.21Å
C02N09doub1.31Å1.38ÅAromatic
C24N23sing1.47Å1.46Å
N08N09sing1.29Å1.38ÅAromatic
N08C11sing1.47Å1.46Å
C21C22sing1.53Å1.54Å
N23C22sing1.47Å1.47Å
N23C27sing1.47Å1.23Å
C27C28sing1.51Å1.60Å
CL1C29sing1.74Å1.78Å
C28C29doub1.38Å1.53ÅAromatic
C28C33sing1.38Å1.53ÅAromatic
C29C30sing1.38Å1.54ÅAromatic
C33C32doub1.38Å1.56ÅAromatic
C30C31doub1.40Å1.52ÅAromatic
C32C31sing1.40Å1.53ÅAromatic
C31C34sing1.48Å1.53Å
C34C36doub1.36Å1.36ÅAromatic
C34O39sing1.35Å1.38ÅAromatic
C36C37sing1.41Å1.37ÅAromatic
O39C38sing1.34Å1.36ÅAromatic
C37C38doub1.35Å1.38ÅAromatic
C13H1sing1.08Å1.08Å
C17H2sing1.08Å1.08Å
C21H3sing1.09Å1.10Å
C21H4sing1.09Å1.10Å
C22H5sing1.09Å1.10Å
C22H6sing1.09Å1.10Å
C24H7sing1.09Å1.10Å
C24H8sing1.09Å1.10Å
C05H9sing1.08Å1.08Å
C11H10sing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H12sing1.09Å1.10Å
C14H13sing1.08Å1.08Å
C16H14sing1.08Å1.08Å
C18H15sing1.09Å1.10Å
C18H16sing1.09Å1.10Å
C19H17sing1.09Å1.10Å
C19H18sing1.09Å1.10Å
C25H19sing1.09Å1.10Å
C25H20sing1.09Å1.10Å
C27H21sing1.09Å1.10Å
C27H22sing1.09Å1.10Å
C30H23sing1.08Å1.08Å
C32H24sing1.08Å1.08Å
C33H25sing1.08Å1.08Å
C36H26sing1.08Å1.08Å
C37H27sing1.08Å1.08Å
C38H28sing1.08Å1.08Å
C41H29sing1.08Å1.08Å
N40H31sing0.97Å1.00Å
O26H32sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O42C41N40120.9°120.0°
O42C41H29119.6°120.0°
C41N40C18121.3°120.0°
N40C41H29119.6°120.0°
C41N40H31119.4°120.0°
N40C18C15107.1°109.5°
N40C18H15110.1°109.5°
N40C18H16110.0°109.5°
C18N40H31119.3°120.0°
C18C15C16119.1°119.8°
C18C15C14120.1°119.9°
C15C18H15110.0°109.5°
C15C18H16110.1°109.5°
C16C15C14120.7°120.3°
C15C16C17119.3°120.1°
C15C16H14120.4°119.9°
C15C14C13120.3°120.2°
C15C14H13119.8°120.0°
C16C17C12120.1°119.8°
C16C17H2119.9°120.1°
C17C16H14120.4°119.9°
N06C05N04120.2°124.0°
C05N06C01119.3°121.3°
N06C05H9119.9°118.0°
C05N04C19119.3°119.3°
C05N04C03119.9°121.5°
N04C05H9119.9°118.0°
C14C13C12118.9°119.8°
C14C13H1120.6°120.1°
C13C14H13119.8°119.9°
N06C01C07131.5°136.8°
N06C01C02121.0°118.8°
C17C12C13120.7°119.8°
C17C12C07120.2°120.1°
C12C17H2120.0°120.1°
N04C19C20105.0°109.5°
C19N04C03120.8°119.3°
N04C19H17110.6°109.4°
N04C19H18110.6°109.5°
C19C20O26108.7°109.5°
C19C20C25112.9°109.5°
C19C20C21112.4°109.5°
C20C19H17110.6°109.5°
C20C19H18110.6°109.5°
C13C12C07119.2°120.1°
C12C13H1120.5°120.1°
N04C03C02119.3°117.4°
N04C03O10122.9°121.3°
C12C07C01123.4°126.8°
C12C07N08128.5°126.8°
O26C20C25106.1°109.6°
O26C20C21106.1°109.6°
C20O26H32109.5°114.0°
C07C01C02107.5°104.4°
C01C07N08108.1°106.4°
C01C02C03120.3°117.0°
C01C02N09108.9°106.6°
C07N08N09107.7°111.5°
C07N08C11128.3°124.2°
C20C25C24114.6°109.3°
C25C20C21110.2°109.2°
C20C25H19108.2°109.5°
C20C25H20108.2°109.5°
C25C24N23116.8°109.5°
C25C24H7107.6°109.5°
C25C24H8107.6°109.5°
C24C25H19108.2°109.5°
C24C25H20108.2°109.5°
C20C21C22113.7°109.3°
C20C21H3108.4°109.5°
C20C21H4108.4°109.4°
C02C03O10117.8°121.3°
C03C02N09130.8°136.4°
C02N09N08107.8°111.1°
C24N23C22111.9°111.2°
C24N23C27110.0°111.0°
N23C24H7107.6°109.5°
N23C24H8107.6°109.5°
N09N08C11124.0°124.3°
N08C11H10109.5°109.5°
N08C11H11109.4°109.5°
N08C11H12109.5°109.4°
C21C22N23114.4°109.5°
C22C21H3108.4°109.6°
C22C21H4108.4°109.5°
C21C22H5108.2°109.4°
C21C22H6108.2°109.5°
C22N23C27112.5°111.0°
N23C22H5108.2°109.5°
N23C22H6108.2°109.5°
N23C27C28110.3°109.5°
N23C27H21109.3°109.5°
N23C27H22109.3°109.5°
C27C28C29121.0°119.8°
C27C28C33119.5°119.9°
C28C27H21109.3°109.4°
C28C27H22109.3°109.4°
CL1C29C28122.5°120.0°
CL1C29C30117.3°120.0°
C29C28C33119.5°120.3°
C28C29C30120.2°120.1°
C28C33C32120.6°120.1°
C28C33H25119.7°119.9°
C29C30C31120.0°119.9°
C29C30H23120.0°120.0°
C33C32C31118.4°119.9°
C33C32H24120.8°120.0°
C32C33H25119.7°119.9°
C30C31C32121.3°119.7°
C30C31C34116.5°120.2°
C31C30H23120.0°120.1°
C32C31C34122.1°120.1°
C31C32H24120.8°120.1°
C31C34C36124.6°125.9°
C31C34O39126.6°125.9°
C36C34O39108.6°108.2°
C34C36C37107.8°106.7°
C34C36H26126.1°126.7°
C34O39C38107.7°109.5°
C36C37C38107.8°107.0°
C37C36H26126.1°126.6°
C36C37H27126.1°126.5°
O39C38C37108.0°108.6°
O39C38H28126.0°125.7°
C38C37H27126.1°126.4°
C37C38H28126.0°125.7°
H3C21H4109.5°109.5°
H5C22H6109.5°109.5°
H7C24H8109.5°109.5°
H10C11H11109.5°109.5°
H10C11H12109.4°109.5°
H11C11H12109.5°109.5°
H15C18H16109.5°109.4°
H17C19H18109.5°109.5°
H19C25H20109.5°109.5°
H21C27H22109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O42C41N40H29180.0°180.0°
O42C41N40C180.4°0.0°
O42C41N40H31179.6°180.0°
C41N40C18H31180.0°180.0°
C41N40C18C15142.5°180.0°
C41N40C18H1597.9°60.0°
C41N40C18H1622.9°60.0°
N40C18C15H15119.6°120.0°
N40C18C15H16119.6°120.0°
N40C18C15C16113.0°90.0°
N40C18C15C1465.5°89.7°
N40C18H15H16121.1°120.0°
C18N40C41H29179.6°180.0°
C18C15C16C14178.5°179.7°
C18C15C16C17179.2°179.9°
C18C15C14C13179.4°179.7°
C18C15C14H130.6°0.4°
C18C15C16H140.8°0.2°
C15C18H15H16121.1°120.0°
C15C18N40H3137.5°0.0°
C15C16C17H14180.0°179.8°
C16C15C14C130.9°0.0°
C15C16C17C120.2°0.5°
C15C16C17H2179.7°180.0°
C16C15C14H13179.1°180.0°
C16C15C18H15127.3°150.0°
C16C15C18H166.6°30.0°
C14C15C16C170.7°0.3°
C15C14C13H13180.0°179.9°
C15C14C13C120.8°0.0°
C15C14C13H1179.2°179.7°
C14C15C16H14179.3°179.9°
C14C15C18H1554.2°30.4°
C14C15C18H16174.9°150.3°
C16C17C12H2180.0°179.5°
C16C17C12C130.1°0.5°
C16C17C12C07179.8°179.5°
N06C05N04H9180.0°179.5°
N06C05N04C19176.6°180.0°
N06C05N04C030.2°0.2°
C05N06C01C07179.1°179.8°
C05N06C01C020.5°0.5°
N04C05N06C010.4°0.5°
C05N04C19C03176.8°179.8°
C05N04C19C2077.7°90.0°
C05N04C03C020.1°0.0°
C05N04C03O10179.8°180.0°
C05N04C19H17163.0°29.9°
C05N04C19H1841.6°150.0°
C14C13C12C170.3°0.3°
C14C13C12H1180.0°179.7°
C14C13C12C07179.9°179.7°
N06C01C07C120.7°0.3°
N06C01C07C02179.6°179.7°
N06C01C07N08179.7°179.7°
N06C01C02C030.4°0.3°
N06C01C02N09179.4°179.8°
C01N06C05H9179.6°179.9°
C17C12C13C07179.7°180.0°
C17C12C07C01137.0°45.0°
C17C12C07N0843.5°135.0°
C17C12C13H1179.6°180.0°
C12C17C16H14179.8°179.7°
N04C19C20H17119.3°120.0°
N04C19C20H18119.3°120.0°
N04C19C20O2655.4°64.8°
N04C19C20C25172.8°55.3°
N04C19C20C2161.8°175.0°
C19N04C03C02176.6°179.7°
C19N04C03O103.4°0.2°
C19N04C05H93.4°0.5°
N04C19H17H18122.1°120.0°
C20C19N04C0399.1°89.7°
C19C20O26C25121.7°120.1°
C19C20O26C21121.1°120.1°
C19C20C25C21126.5°119.9°
C19C20C25C2477.0°62.2°
C19C20C21C2273.2°62.2°
C19C20C21H3166.1°177.8°
C19C20C21H447.4°57.7°
C20C19H17H18122.1°120.0°
C19C20C25H1943.8°57.7°
C19C20C25H20162.3°177.8°
C19C20O26H32180.0°59.9°
C13C12C07C0143.3°135.0°
C13C12C07N08136.2°44.9°
C13C12C17H2179.9°180.0°
C12C13C14H13179.2°180.0°
N04C03C02C010.2°0.0°
N04C03C02O10180.0°179.9°
N04C03C02N09179.0°180.0°
C03N04C05H9179.8°179.8°
C03N04C19H1720.2°150.3°
C03N04C19H18141.6°30.3°
C12C07C01N08179.6°180.0°
C12C07C01C02179.7°179.9°
C12C07N08N09180.0°179.9°
C12C07N08C110.1°0.0°
C07C12C13H10.1°0.1°
C07C12C17H20.2°0.0°
O26C20C25C21114.5°120.0°
O26C20C25C24164.1°177.6°
O26C20C21C22168.1°177.7°
O26C20C21H347.5°57.6°
O26C20C21H471.3°62.4°
O26C20C19H17174.7°175.2°
O26C20C19H1863.9°55.1°
O26C20C25H1975.2°62.4°
O26C20C25H2043.3°57.7°
C07C01C02C03179.2°180.0°
C07C01C02N090.3°0.0°
C01C07N08N090.5°0.0°
C01C07N08C11179.6°180.0°
C02C01C07N080.1°0.0°
C01C02C03N09178.7°180.0°
C01C02C03O10179.8°179.9°
C01C02N09N080.6°0.0°
C07N08N09C020.6°0.0°
C07N08N09C11179.9°179.9°
C07N08C11H10179.9°90.0°
C07N08C11H1160.2°150.0°
C07N08C11H1259.9°30.0°
C20C25C24H19120.7°120.0°
C20C25C24H20120.8°119.9°
C20C25C24N2345.0°59.2°
C25C20C21C2253.6°57.7°
C25C20C21H367.0°62.4°
C25C20C21H4174.2°177.6°
C20C25C24H776.0°60.9°
C20C25C24H8166.1°179.2°
C25C20C19H1767.9°64.7°
C25C20C19H1853.5°175.3°
C20C25H19H20117.7°120.1°
C25C20O26H3258.3°60.3°
C24C25C20C2149.6°57.6°
C25C24N23H7121.1°120.0°
C25C24N23H8121.1°120.0°
C25C24N23C2241.1°61.8°
C25C24N23C27166.9°174.2°
C25C24H7H8116.7°120.0°
C24C25H19H20117.7°120.1°
C20C21C22H3120.6°120.0°
C20C21C22H4120.6°119.9°
C20C21C22N2352.8°59.2°
C20C21H3H4118.1°120.0°
C20C21C22H5173.6°179.2°
C20C21C22H667.9°60.8°
C21C20C19H1757.5°55.0°
C21C20C19H18178.9°65.0°
C21C20C25H19170.3°177.6°
C21C20C25H2071.2°62.3°
C21C20O26H3258.9°180.0°
C03C02N09N08179.4°180.0°
O10C03C02N091.0°0.0°
C02N09N08C11179.5°180.0°
C24N23C22C2144.4°61.8°
C24N23C22C27124.5°124.0°
C24N23C27C28172.8°164.7°
C24N23C22H5165.1°178.3°
C24N23C22H676.4°58.2°
N23C24H7H8116.7°120.0°
N23C24C25H19165.8°179.1°
N23C24C25H2075.7°60.8°
C24N23C27H2167.0°44.7°
C24N23C27H2252.7°75.3°
N09N08C11H100.0°90.0°
N09N08C11H11120.0°30.1°
N09N08C11H12120.0°150.0°
N08C11H10H11120.0°120.0°
N08C11H10H12120.0°120.0°
N08C11H11H12120.0°120.0°
C21C22N23H5120.7°119.9°
C21C22N23H6120.7°120.1°
C21C22N23C27168.9°174.1°
C22C21H3H4118.1°120.1°
C21C22H5H6117.7°120.0°
C22N23C27C2861.6°71.1°
N23C22C21H367.8°60.8°
N23C22C21H4173.4°179.1°
N23C22H5H6117.7°120.1°
C22N23C24H780.0°58.2°
C22N23C24H8162.2°178.2°
C22N23C27H2158.5°168.9°
C22N23C27H22178.2°48.8°
N23C27C28H21120.1°120.0°
N23C27C28H22120.1°120.0°
N23C27C28C29101.5°74.3°
N23C27C28C3376.3°105.4°
C27N23C22H570.4°54.2°
C27N23C22H648.1°65.8°
C27N23C24H745.9°65.8°
C27N23C24H872.0°54.2°
N23C27H21H22119.6°120.1°
C27C28C29CL11.8°0.4°
C27C28C29C33177.8°179.7°
C27C28C29C30178.2°179.7°
C27C28C33C32178.4°179.7°
C28C27H21H22119.6°119.9°
C27C28C33H251.6°0.3°
CL1C29C28C30179.9°179.9°
CL1C29C28C33179.6°180.0°
CL1C29C30C31179.5°180.0°
CL1C29C30H230.5°0.0°
C29C28C33C320.5°0.0°
C28C29C30C310.6°0.0°
C29C28C27H2118.6°45.8°
C29C28C27H22138.3°165.7°
C28C29C30H23179.4°179.9°
C29C28C33H25179.5°180.0°
C33C28C29C300.3°0.0°
C28C33C32H25180.0°180.0°
C28C33C32C310.2°0.0°
C33C28C27H21163.6°134.6°
C33C28C27H2243.8°14.6°
C28C33C32H24179.8°180.0°
C29C30C31H23180.0°180.0°
C29C30C31C321.3°0.0°
C29C30C31C34178.1°180.0°
C33C32C31C301.1°0.0°
C33C32C31H24180.0°180.0°
C33C32C31C34177.7°180.0°
C30C31C32C34176.6°180.0°
C30C31C34C361.3°180.0°
C30C31C34O39172.2°0.3°
C30C31C32H24178.9°180.0°
C32C31C34C36178.0°0.0°
C32C31C34O394.5°179.7°
C32C31C30H23178.7°180.0°
C31C32C33H25179.8°180.0°
C31C34C36O39174.5°179.7°
C31C34C36C37177.0°180.0°
C31C34O39C38177.0°179.9°
C34C31C30H231.9°0.0°
C34C31C32H242.3°0.0°
C31C34C36H263.0°0.1°
C34C36C37H26180.0°179.9°
C36C34O39C382.6°0.4°
C34C36C37C381.4°0.0°
C34C36C37H27178.7°180.0°
O39C34C36C372.5°0.2°
C34O39C38C371.8°0.3°
O39C34C36H26177.5°179.9°
C34O39C38H28178.2°179.8°
C36C37C38O390.3°0.2°
C36C37C38H27180.0°180.0°
C36C37C38H28179.7°180.0°
O39C38C37H28180.0°179.8°
O39C38C37H27179.7°179.8°
C38C37C36H26178.6°179.9°
H1C13C14H130.8°0.3°
H2C17C16H140.3°0.2°
H3C21C22H553.0°59.2°
H3C21C22H6171.5°179.1°
H4C21C22H565.8°60.9°
H4C21C22H652.7°59.0°
H7C24C25H1944.7°59.1°
H7C24C25H20163.2°179.2°
H8C24C25H1973.2°60.9°
H8C24C25H2045.3°59.2°
H10C11H11H12120.0°120.0°
H15C18N40H3182.1°120.0°
H16C18N40H31157.1°120.0°
H24C32C33H250.2°0.0°
H26C36C37H271.3°0.1°
H27C37C38H280.3°0.0°
H29C41N40H310.4°0.0°

222415

PDB entries from 2024-07-10

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