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DVN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3'C3'sing1.43Å1.48Å
O2'C2'sing1.43Å1.44Å
C3'C2'sing1.55Å1.54Å
C3'C4'sing1.54Å1.53Å
C2'C1'sing1.54Å1.54Å
O1'C1'sing1.43Å1.43Å
C4'O4'sing1.45Å1.47Å
C4'C5'sing1.53Å1.52Å
C1'O4'sing1.44Å1.44Å
C5'O5'sing1.43Å1.45Å
OACPBMdoub1.48Å1.49Å
O5'PBMsing1.61Å1.64Å
PBMOAKsing1.61Å1.62Å
PBMOAYsing1.61Å1.61Å
OAHCBFsing1.43Å1.42Å
OAYPBNsing1.61Å1.62Å
CBFCBHsing1.54Å1.53Å
CBFCBIsing1.55Å1.53Å
OAJPBLdoub1.48Å1.63Å
CAPCBHsing1.53Å1.53Å
CAPOAUsing1.43Å1.45Å
CBHOAWsing1.44Å1.44Å
OAUPBNsing1.61Å1.62Å
PBNOADdoub1.48Å1.48Å
PBNOALsing1.61Å1.62Å
OAXCBIsing1.43Å1.46Å
OAXPBLsing1.61Å1.63Å
CBICBJsing1.55Å1.53Å
PBLOAIsing1.61Å1.62Å
PBLOABsing1.61Å1.49Å
OAWCBJsing1.44Å1.45Å
CBJN9sing1.46Å1.49Å
N9C8sing1.36Å1.33ÅAromatic
N9C4sing1.37Å1.33ÅAromatic
C8N7doub1.30Å1.34ÅAromatic
C4N3doub1.33Å1.35ÅAromatic
C4C5sing1.41Å1.35ÅAromatic
N3C2sing1.32Å1.39ÅAromatic
N7C5sing1.35Å1.34ÅAromatic
C5C6doub1.40Å1.34ÅAromatic
C2N1doub1.32Å1.40ÅAromatic
C6N1sing1.33Å1.34ÅAromatic
C6N6sing1.38Å1.35Å
O3'H1sing0.97Å0.95Å
C3'H2sing1.09Å1.10Å
C2'H3sing1.09Å1.10Å
O2'H4sing0.97Å0.95Å
C1'H5sing1.09Å1.10Å
O1'H6sing0.97Å0.95Å
C4'H7sing1.09Å1.10Å
C5'H8sing1.09Å1.10Å
C5'H9sing1.09Å1.10Å
OAKH10sing0.97Å0.95Å
OALH11sing0.97Å0.95Å
CAPH12sing1.09Å1.10Å
CAPH13sing1.09Å1.10Å
CBHH14sing1.09Å1.10Å
CBFH15sing1.09Å1.10Å
OAHH16sing0.97Å0.95Å
CBIH17sing1.09Å1.10Å
OAIH18sing0.97Å0.95Å
OABH19sing0.97Å0.95Å
CBJH20sing1.09Å1.10Å
C8H21sing1.08Å1.08Å
C2H22sing1.08Å1.08Å
N6H23sing0.97Å1.00Å
N6H24sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3'C3'C2'114.0°110.5°
O3'C3'C4'113.3°110.5°
C3'O3'H1109.5°114.0°
O3'C3'H2109.5°110.4°
O2'C2'C3'111.0°110.5°
O2'C2'C1'112.2°110.5°
O2'C2'H3111.1°110.5°
C2'O2'H4109.5°114.1°
C2'C3'C4'101.9°104.1°
C3'C2'C1'102.7°104.0°
C2'C3'H2108.8°110.5°
C3'C2'H3109.7°110.5°
C3'C4'O4'105.9°104.8°
C3'C4'C5'109.8°110.4°
C4'C3'H2108.9°110.7°
C3'C4'H7110.9°110.4°
C2'C1'O1'111.8°110.4°
C2'C1'O4'106.8°104.9°
C1'C2'H3109.7°110.5°
C2'C1'H5109.8°110.4°
O1'C1'O4'105.6°110.4°
O1'C1'H5111.5°110.4°
C1'O1'H6109.5°114.0°
O4'C4'C5'107.0°110.3°
C4'O4'C1'109.3°105.2°
O4'C4'H7111.9°110.4°
C4'C5'O5'103.4°109.5°
C5'C4'H7111.1°110.4°
C4'C5'H8111.0°109.4°
C4'C5'H9111.0°109.5°
O4'C1'H5111.2°110.3°
C5'O5'PBM124.9°123.0°
O5'C5'H8111.0°109.5°
O5'C5'H9111.0°109.5°
OACPBMO5'110.0°109.4°
OACPBMOAK112.6°109.5°
OACPBMOAY108.3°109.5°
O5'PBMOAK107.6°109.5°
O5'PBMOAY108.1°109.5°
OAKPBMOAY110.1°109.5°
PBMOAKH10109.5°114.0°
PBMOAYPBN127.0°134.0°
OAHCBFCBH110.5°110.5°
OAHCBFCBI108.2°110.5°
OAHCBFH15112.4°110.6°
CBFOAHH16109.5°114.0°
OAYPBNOAU110.2°109.5°
OAYPBNOAD107.1°109.5°
OAYPBNOAL104.3°109.5°
CBHCBFCBI103.9°104.2°
CBFCBHCAP112.4°109.9°
CBFCBHOAW106.3°107.3°
CBFCBHH14110.7°110.0°
CBHCBFH15110.7°110.5°
CBFCBIOAX111.2°110.9°
CBFCBICBJ99.9°102.1°
CBICBFH15110.8°110.5°
CBFCBIH17110.6°110.9°
OAJPBLOAX106.0°109.4°
OAJPBLOAI107.5°109.5°
OAJPBLOAB112.0°109.5°
CBHCAPOAU108.8°109.5°
CAPCBHOAW104.5°109.9°
CBHCAPH12109.7°109.5°
CBHCAPH13109.6°109.5°
CAPCBHH14110.7°109.9°
CAPOAUPBN123.7°123.0°
OAUCAPH12109.7°109.5°
OAUCAPH13109.6°109.5°
CBHOAWCBJ108.4°107.0°
OAWCBHH14112.0°109.8°
OAUPBNOAD112.8°109.5°
OAUPBNOAL109.1°109.5°
OADPBNOAL112.9°109.5°
PBNOALH11109.5°114.0°
CBIOAXPBL118.9°123.0°
OAXCBICBJ112.3°110.9°
OAXCBIH17111.7°110.8°
OAXPBLOAI104.9°109.5°
OAXPBLOAB112.0°109.5°
CBICBJOAW104.5°103.5°
CBICBJN9114.6°110.6°
CBJCBIH17110.6°110.9°
CBICBJH20110.5°110.6°
OAIPBLOAB113.9°109.4°
PBLOAIH18109.5°114.0°
PBLOABH19109.5°114.0°
OAWCBJN9104.2°110.6°
OAWCBJH20111.6°110.6°
CBJN9C8128.2°126.3°
CBJN9C4123.7°126.3°
N9CBJH20111.1°110.7°
C8N9C4108.0°107.5°
N9C8N7108.5°110.0°
N9C8H21125.8°125.0°
N9C4N3130.6°134.9°
N9C4C5107.9°106.0°
C8N7C5107.8°109.4°
N7C8H21125.8°125.0°
N3C4C5121.5°119.1°
C4N3C2119.0°120.6°
C4C5N7107.8°107.1°
C4C5C6120.5°118.1°
N3C2N1118.1°122.5°
N3C2H22121.0°118.7°
N7C5C6131.7°134.7°
C5C6N1120.6°118.5°
C5C6N6117.6°120.8°
C2N1C6120.2°121.1°
N1C2H22120.9°118.8°
N1C6N6121.8°120.7°
C6N6H23109.5°119.9°
C6N6H24109.5°120.0°
H8C5'H9109.5°109.5°
H12CAPH13109.5°109.5°
H23N6H24109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3'C3'C2'O2'33.4°0.0°
O3'C3'C2'C4'122.4°118.6°
O3'C3'C2'H2122.6°122.5°
O3'C3'C4'H2122.2°122.6°
O3'C3'C2'C1'86.7°118.7°
O3'C3'C4'O4'90.3°142.7°
O3'C3'C4'C5'154.5°98.6°
O3'C3'C2'H3156.6°122.7°
O3'C3'C4'H731.2°23.8°
O2'C2'C3'C1'120.1°118.7°
O2'C2'C3'H3123.3°122.7°
O2'C2'C3'C4'155.8°118.6°
O2'C2'C1'H3124.0°122.7°
O2'C2'C1'O1'31.3°23.8°
O2'C2'C1'O4'146.4°142.6°
O2'C2'C3'H289.2°122.5°
O2'C2'C1'H592.9°98.5°
C2'C3'C4'H2114.9°118.7°
C3'C2'C1'H3116.7°118.6°
C3'C2'C1'O1'88.0°94.9°
C2'C3'C4'O4'32.6°24.0°
C2'C3'C4'C5'82.6°142.8°
C3'C2'C1'O4'27.1°24.0°
C2'C3'O3'H1180.0°61.4°
C3'C2'O2'H4180.0°180.0°
C3'C2'C1'H5147.8°142.8°
C2'C3'C4'H7154.2°94.8°
C4'C3'C2'C1'35.7°0.0°
C3'C4'O4'C5'117.1°118.8°
C3'C4'O4'H7121.0°118.9°
C3'C4'C5'H7123.1°122.4°
C3'C4'O4'C1'16.4°40.5°
C3'C4'C5'O5'171.4°175.0°
C4'C3'O3'H164.1°176.1°
C4'C3'C2'H380.9°118.7°
C3'C4'C5'H869.6°55.0°
C3'C4'C5'H952.3°64.9°
C2'C1'O1'O4'115.8°115.4°
C2'C1'O1'H5123.3°122.3°
C2'C1'O4'C4'6.9°40.5°
C2'C1'O4'H5119.8°118.9°
C1'C2'C3'H2150.7°118.8°
C1'C2'O2'H465.7°65.4°
C2'C1'O1'H6180.0°180.0°
O1'C1'O4'C4'112.3°78.3°
O1'C1'O4'H5121.1°122.3°
O1'C1'C2'H3155.4°146.5°
O4'C4'C5'H7122.4°122.3°
O4'C4'C5'O5'56.9°69.7°
O4'C4'C3'H2147.5°94.7°
C4'O4'C1'H5126.7°159.4°
O4'C4'C5'H8175.9°170.4°
O4'C4'C5'H962.1°50.4°
C5'C4'O4'C1'100.6°159.3°
C4'C5'O5'H8119.0°119.9°
C4'C5'O5'H9119.0°120.0°
C4'C5'O5'PBM114.6°180.0°
C5'C4'C3'H232.3°24.0°
C4'C5'H8H9122.8°119.9°
O4'C1'C2'H389.6°94.7°
O4'C1'O1'H664.3°64.6°
C1'O4'C4'H7137.4°78.4°
C5'O5'PBMOAC75.5°55.0°
C5'O5'PBMOAK47.5°65.0°
C5'O5'PBMOAY166.4°175.0°
O5'C5'C4'H765.5°52.6°
O5'C5'H8H9122.9°120.1°
OACPBMO5'OAK123.0°120.0°
OACPBMO5'OAY118.1°120.0°
OACPBMOAKOAY121.0°120.0°
OACPBMOAYPBN173.4°45.0°
OACPBMOAKH100.0°180.0°
O5'PBMOAKOAY117.7°120.0°
O5'PBMOAYPBN54.2°165.0°
PBMO5'C5'H84.4°60.1°
PBMO5'C5'H9126.4°60.0°
O5'PBMOAKH10121.4°60.0°
OAKPBMOAYPBN63.1°75.0°
PBMOAYPBNOAU22.1°160.0°
PBMOAYPBNOAD145.2°40.0°
PBMOAYPBNOAL94.9°80.0°
OAYPBMOAKH10121.0°60.0°
OAHCBFCBHCBI115.9°118.7°
OAHCBFCBHH15125.2°122.6°
OAHCBFCBIH15123.6°122.7°
OAHCBFCBHCAP150.4°119.9°
OAHCBFCBHOAW95.8°120.7°
OAHCBFCBIOAX37.5°20.4°
OAHCBFCBICBJ81.3°97.7°
OAHCBFCBHH1426.0°1.2°
OAHCBFCBIH17162.2°144.0°
OAYPBNOAUCAP89.7°175.0°
OAYPBNOAUOAD119.7°120.0°
OAYPBNOAUOAL114.0°120.0°
OAYPBNOADOAL114.2°120.0°
OAYPBNOALH11115.9°60.0°
CBHCBFCBIH15118.9°118.7°
CBFCBHCAPOAW114.9°117.8°
CBFCBHCAPH14124.4°121.2°
CBFCBHCAPOAU46.5°175.7°
CBFCBHOAWH14121.0°119.6°
CBHCBFCBIOAX155.0°139.1°
CBHCBFCBICBJ36.2°20.9°
CBFCBHOAWCBJ5.8°26.5°
CBFCBHCAPH12166.4°64.3°
CBFCBHCAPH1373.4°55.7°
CBHCBFOAHH16180.0°61.5°
CBHCBFCBIH1780.3°97.3°
CBICBFCBHCAP93.8°121.4°
CBICBFCBHOAW20.0°2.0°
CBFCBIOAXCBJ111.0°112.7°
CBFCBIOAXH17124.1°123.6°
CBFCBIOAXPBL131.4°121.5°
CBFCBICBJH17116.5°118.2°
CBFCBICBJOAW40.4°37.0°
CBFCBICBJN9153.9°155.5°
CBICBFCBHH14141.9°117.4°
CBICBFOAHH1666.8°176.2°
CBFCBICBJH2079.7°81.5°
OAJPBLOAXCBI75.1°55.0°
OAJPBLOAXOAI113.5°120.0°
OAJPBLOAXOAB122.4°120.0°
OAJPBLOAIOAB124.7°120.0°
OAJPBLOAIH180.0°180.0°
OAJPBLOABH190.0°60.0°
CBHCAPOAUH12119.9°120.0°
CBHCAPOAUH13119.9°120.0°
CAPCBHOAWH14119.9°121.0°
CBHCAPOAUPBN148.6°180.0°
CAPCBHOAWCBJ124.9°145.9°
CBHCAPH12H13120.3°120.0°
CAPCBHCBFH1525.2°2.8°
OAUCAPCBHOAW68.4°66.5°
CAPOAUPBNOAD29.9°55.0°
CAPOAUPBNOAL156.3°65.0°
OAUCAPH12H13120.3°120.0°
OAUCAPCBHH14170.9°54.5°
CBHOAWCBJCBI29.6°40.1°
CBHOAWCBJN9150.2°158.5°
OAWCBHCAPH1251.5°53.6°
OAWCBHCAPH13171.7°173.6°
OAWCBHCBFH15139.0°116.7°
CBHOAWCBJH2089.9°78.5°
OAUPBNOADOAL124.3°120.0°
OAUPBNOALH11126.3°60.0°
PBNOAUCAPH1228.7°60.0°
PBNOAUCAPH1391.5°60.0°
OADPBNOALH110.0°180.0°
OAXCBICBJH17125.5°123.6°
CBIOAXPBLOAI171.4°65.0°
CBIOAXPBLOAB47.4°175.0°
OAXCBICBJOAW158.4°155.2°
OAXCBICBJN988.2°86.3°
OAXCBICBFH1586.1°102.3°
OAXCBICBJH2038.2°36.7°
PBLOAXCBICBJ117.6°125.9°
OAXPBLOAIOAB122.8°120.0°
PBLOAXCBIH177.3°2.2°
OAXPBLOAIH18112.5°60.0°
OAXPBLOABH19118.9°180.0°
CBICBJOAWN9120.6°118.5°
CBICBJOAWH20119.5°118.5°
CBICBJN9H20126.1°122.9°
CBICBJN9C842.8°90.5°
CBICBJN9C4139.8°89.2°
CBJCBICBFH15155.2°139.6°
OAIPBLOABH19122.2°60.0°
OABPBLOAIH18124.7°60.0°
OAWCBJN9H20120.3°123.0°
OAWCBJN9C870.8°23.5°
OAWCBJN9C4106.6°156.7°
CBJOAWCBHH14115.2°93.1°
OAWCBJCBIH1776.1°81.2°
CBJN9C8C4177.7°179.8°
CBJN9C8N7178.4°180.0°
CBJN9C4N31.8°0.0°
CBJN9C4C5178.9°179.9°
N9CBJCBIH1737.3°37.3°
CBJN9C8H211.6°0.0°
N9C8N7H21180.0°180.0°
C8N9C4N3179.6°179.8°
C8N9C4C51.0°0.3°
N9C8N7C50.0°0.0°
C8N9CBJH20168.9°146.5°
C4N9C8N70.7°0.2°
N9C4N3C5179.3°179.9°
N9C4N3C2179.3°180.0°
N9C4C5N71.0°0.3°
N9C4C5C6179.8°179.8°
C4N9CBJH2013.7°33.7°
C4N9C8H21179.3°179.8°
C8N7C5C40.6°0.2°
C8N7C5C6179.6°180.0°
N3C4C5N7179.5°179.7°
N3C4C5C60.4°0.1°
C4N3C2N10.4°0.0°
C4N3C2H22179.6°180.0°
C5C4N3C20.1°0.1°
C4C5N7C6179.0°179.8°
C4C5C6N10.3°0.4°
C4C5C6N6179.6°179.8°
N3C2N1H22180.0°180.0°
N3C2N1C60.5°0.3°
N7C5C6N1179.2°179.4°
N7C5C6N60.7°0.0°
C5N7C8H21180.0°180.0°
C5C6N1C20.2°0.5°
C5C6N1N6179.9°179.3°
C5C6N6H23179.9°0.0°
C5C6N6H2459.9°180.0°
C2N1C6N6179.9°179.9°
C6N1C2H22179.5°179.7°
N1C6N6H230.0°179.4°
N1C6N6H24120.0°0.7°
C6N6H23H24120.0°180.0°
H1O3'C3'H257.7°61.2°
H2C3'C2'H334.0°0.2°
H2C3'C4'H790.9°146.4°
H3C2'O2'H457.5°57.3°
H3C2'C1'H531.1°24.2°
H5C1'O1'H656.6°57.7°
H7C4'C5'H853.5°67.4°
H7C4'C5'H9175.5°172.7°
H12CAPCBHH1469.2°174.5°
H13CAPCBHH1451.0°65.5°
H14CBHCBFH1599.1°123.9°
H15CBFOAHH1655.8°61.1°
H15CBFCBIH1738.6°21.3°
H17CBICBJH20163.7°160.3°

222415

PDB entries from 2024-07-10

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