DV9
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.48Å | |
O | C | doub | 1.21Å | 1.19Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CB | CG | sing | 1.53Å | 1.54Å | |
OE1 | CD | doub | 1.21Å | 1.18Å | |
CG | CD | sing | 1.51Å | 1.54Å | |
CD | C45 | sing | 1.51Å | 1.54Å | |
O14 | P01 | sing | 1.61Å | 1.65Å | |
C45 | F01 | sing | 1.40Å | 1.35Å | |
C45 | P01 | sing | 1.82Å | 1.86Å | |
C45 | F02 | sing | 1.40Å | 1.37Å | |
P01 | O15 | doub | 1.48Å | 1.46Å | |
P01 | O16 | sing | 1.61Å | 1.46Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H42 | sing | 1.09Å | 1.10Å | |
CB | H41 | sing | 1.09Å | 1.10Å | |
CG | H43 | sing | 1.09Å | 1.10Å | |
CG | H44 | sing | 1.09Å | 1.10Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N | H | sing | 1.01Å | 1.00Å | |
O14 | H59 | sing | 0.97Å | 0.95Å | |
O16 | H4 | sing | 0.97Å | 0.95Å | |
C | OXT | sing | 1.34Å | 1.46Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 105.2° | 109.5° |
N | CA | CB | 113.0° | 109.5° |
N | CA | HA | 109.7° | 109.4° |
CA | N | H2 | 109.5° | 111.0° |
CA | N | H | 109.5° | 111.0° |
O | C | CA | 121.3° | 120.0° |
O | C | OXT | 119.5° | 120.0° |
C | CA | CB | 110.9° | 109.5° |
C | CA | HA | 109.0° | 109.5° |
CA | C | OXT | 119.2° | 120.0° |
CA | CB | CG | 111.4° | 109.5° |
CB | CA | HA | 108.9° | 109.5° |
CA | CB | H42 | 109.0° | 109.5° |
CA | CB | H41 | 109.0° | 109.5° |
CB | CG | CD | 113.3° | 109.5° |
CG | CB | H42 | 109.0° | 109.5° |
CG | CB | H41 | 109.0° | 109.4° |
CB | CG | H43 | 108.5° | 109.5° |
CB | CG | H44 | 108.5° | 109.4° |
OE1 | CD | CG | 119.6° | 120.0° |
OE1 | CD | C45 | 118.6° | 120.0° |
CG | CD | C45 | 121.8° | 120.0° |
CD | CG | H43 | 108.5° | 109.5° |
CD | CG | H44 | 108.5° | 109.5° |
CD | C45 | F01 | 107.9° | 109.5° |
CD | C45 | P01 | 112.6° | 109.5° |
CD | C45 | F02 | 110.8° | 109.5° |
O14 | P01 | C45 | 110.2° | 109.5° |
O14 | P01 | O15 | 112.2° | 109.5° |
O14 | P01 | O16 | 110.2° | 109.5° |
P01 | O14 | H59 | 109.5° | 114.0° |
F01 | C45 | P01 | 105.3° | 109.4° |
F01 | C45 | F02 | 109.5° | 109.4° |
P01 | C45 | F02 | 110.5° | 109.5° |
C45 | P01 | O15 | 113.0° | 109.5° |
C45 | P01 | O16 | 109.6° | 109.4° |
O15 | P01 | O16 | 101.2° | 109.5° |
P01 | O16 | H4 | 109.5° | 114.0° |
H42 | CB | H41 | 109.5° | 109.5° |
H43 | CG | H44 | 109.5° | 109.4° |
H2 | N | H | 109.4° | 111.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | O | 120.6° | 20.1° |
N | CA | C | CB | 122.5° | 120.0° |
N | CA | C | HA | 117.6° | 120.0° |
N | CA | CB | HA | 122.2° | 119.9° |
N | CA | CB | CG | 175.7° | 65.0° |
N | CA | CB | H42 | 55.4° | 55.0° |
N | CA | CB | H41 | 64.1° | 175.0° |
CA | N | H2 | H | 120.0° | 124.0° |
N | CA | C | OXT | 55.9° | 160.0° |
O | C | CA | OXT | 176.5° | 179.9° |
O | C | CA | CB | 116.9° | 100.0° |
O | C | CA | HA | 3.0° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | CA | CB | HA | 119.9° | 120.0° |
C | CA | CB | CG | 66.5° | 175.0° |
C | CA | CB | H42 | 173.2° | 65.0° |
C | CA | CB | H41 | 53.8° | 55.0° |
C | CA | N | H2 | 180.0° | 60.0° |
C | CA | N | H | 60.0° | 176.0° |
CA | C | OXT | HXT | 176.5° | 180.0° |
CA | CB | CG | H42 | 120.3° | 120.0° |
CA | CB | CG | H41 | 120.3° | 120.0° |
CA | CB | CG | CD | 107.4° | 180.0° |
CA | CB | H42 | H41 | 119.1° | 120.0° |
CA | CB | CG | H43 | 132.1° | 59.9° |
CA | CB | CG | H44 | 13.1° | 60.0° |
CB | CA | N | H2 | 58.9° | 60.0° |
CB | CA | N | H | 178.9° | 63.9° |
CB | CA | C | OXT | 66.6° | 80.0° |
CB | CG | CD | OE1 | 63.5° | 0.0° |
CB | CG | CD | H43 | 120.5° | 120.0° |
CB | CG | CD | H44 | 120.6° | 120.0° |
CB | CG | CD | C45 | 116.6° | 180.0° |
CG | CB | CA | HA | 53.5° | 55.0° |
CG | CB | H42 | H41 | 119.1° | 120.0° |
CB | CG | H43 | H44 | 118.3° | 119.9° |
OE1 | CD | CG | C45 | 179.9° | 180.0° |
OE1 | CD | C45 | F01 | 76.2° | 120.0° |
OE1 | CD | C45 | P01 | 39.5° | 0.0° |
OE1 | CD | C45 | F02 | 163.9° | 120.0° |
OE1 | CD | CG | H43 | 175.9° | 120.0° |
OE1 | CD | CG | H44 | 57.1° | 120.0° |
CG | CD | C45 | F01 | 103.9° | 60.0° |
CG | CD | C45 | P01 | 140.4° | 180.0° |
CG | CD | C45 | F02 | 16.0° | 60.0° |
CD | CG | CB | H42 | 12.9° | 60.0° |
CD | CG | CB | H41 | 132.3° | 60.0° |
CD | CG | H43 | H44 | 118.2° | 120.0° |
CD | C45 | P01 | O14 | 27.1° | 60.0° |
CD | C45 | F01 | P01 | 120.4° | 120.0° |
CD | C45 | F01 | F02 | 120.7° | 120.0° |
CD | C45 | P01 | F02 | 124.5° | 120.1° |
CD | C45 | P01 | O15 | 99.3° | 180.0° |
CD | C45 | P01 | O16 | 148.6° | 60.1° |
C45 | CD | CG | H43 | 4.0° | 60.0° |
C45 | CD | CG | H44 | 122.8° | 60.0° |
O14 | P01 | C45 | F01 | 90.2° | 60.0° |
O14 | P01 | C45 | O15 | 126.4° | 120.0° |
O14 | P01 | C45 | O16 | 121.5° | 120.0° |
O14 | P01 | C45 | F02 | 151.6° | 180.0° |
O14 | P01 | O15 | O16 | 117.5° | 120.0° |
O14 | P01 | O16 | H4 | 118.9° | 60.0° |
F01 | C45 | P01 | F02 | 118.2° | 119.9° |
F01 | C45 | P01 | O15 | 143.4° | 60.0° |
F01 | C45 | P01 | O16 | 31.3° | 180.0° |
C45 | P01 | O15 | O16 | 117.1° | 119.9° |
C45 | P01 | O14 | H59 | 126.9° | 60.0° |
C45 | P01 | O16 | H4 | 119.6° | 180.0° |
F02 | C45 | P01 | O15 | 25.2° | 59.9° |
F02 | C45 | P01 | O16 | 86.9° | 60.0° |
O15 | P01 | O14 | H59 | 0.0° | 180.0° |
O15 | P01 | O16 | H4 | 0.0° | 60.1° |
O16 | P01 | O14 | H59 | 112.0° | 59.9° |
HA | CA | CB | H42 | 66.8° | 175.0° |
HA | CA | CB | H41 | 173.7° | 65.0° |
HA | CA | N | H2 | 62.8° | 180.0° |
HA | CA | N | H | 57.1° | 56.1° |
HA | CA | C | OXT | 173.5° | 40.1° |
H42 | CB | CG | H43 | 107.7° | 179.9° |
H42 | CB | CG | H44 | 133.4° | 60.0° |
H41 | CB | CG | H43 | 11.8° | 60.1° |
H41 | CB | CG | H44 | 107.1° | 180.0° |