DV3
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C1' | C2' | sing | 1.55Å | 1.34Å | |
| C1' | O4' | sing | 1.44Å | 1.61Å | |
| C2' | C3' | sing | 1.55Å | 1.50Å | |
| O4' | C4' | sing | 1.44Å | 1.29Å | |
| O3' | C3' | sing | 1.43Å | 1.38Å | |
| C3' | C4' | sing | 1.54Å | 1.58Å | |
| C4' | C5' | sing | 1.53Å | 1.55Å | |
| C5' | O5' | sing | 1.43Å | 1.42Å | |
| O5' | P | sing | 1.61Å | 1.68Å | |
| OP2 | P | doub | 1.48Å | 1.50Å | |
| P | SP3 | sing | 2.12Å | 2.09Å | |
| P | OP3 | sing | 1.61Å | 1.50Å | |
| SP3 | H1 | sing | 1.35Å | 1.30Å | |
| OP3 | H2 | sing | 0.97Å | 0.95Å | |
| C2' | H3 | sing | 1.09Å | 1.10Å | |
| C2' | H4 | sing | 1.09Å | 1.10Å | |
| C5' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| C4' | H7 | sing | 1.09Å | 1.10Å | |
| C1' | H8 | sing | 1.09Å | 1.10Å | |
| C1' | H9 | sing | 1.09Å | 1.10Å | |
| C3' | H10 | sing | 1.09Å | 1.10Å | |
| O3' | H11 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2' | C1' | O4' | 104.2° | 103.5° |
| C1' | C2' | C3' | 105.5° | 102.1° |
| C1' | C2' | H3 | 110.5° | 110.9° |
| C1' | C2' | H4 | 110.5° | 111.0° |
| C2' | C1' | H8 | 110.8° | 110.6° |
| C2' | C1' | H9 | 110.8° | 110.6° |
| C1' | O4' | C4' | 107.4° | 107.0° |
| O4' | C1' | H8 | 110.8° | 110.6° |
| O4' | C1' | H9 | 110.8° | 110.6° |
| C2' | C3' | O3' | 108.1° | 110.5° |
| C2' | C3' | C4' | 101.8° | 104.2° |
| C3' | C2' | H3 | 110.5° | 110.9° |
| C3' | C2' | H4 | 110.4° | 110.9° |
| C2' | C3' | H10 | 112.1° | 110.5° |
| O4' | C4' | C3' | 107.9° | 107.3° |
| O4' | C4' | C5' | 108.0° | 109.8° |
| O4' | C4' | H7 | 113.3° | 109.8° |
| O3' | C3' | C4' | 109.2° | 110.5° |
| O3' | C3' | H10 | 114.0° | 110.6° |
| C3' | O3' | H11 | 109.5° | 114.0° |
| C3' | C4' | C5' | 109.3° | 109.9° |
| C3' | C4' | H7 | 109.0° | 110.1° |
| C4' | C3' | H10 | 110.9° | 110.5° |
| C4' | C5' | O5' | 110.0° | 109.5° |
| C4' | C5' | H5 | 109.3° | 109.4° |
| C4' | C5' | H6 | 109.4° | 109.4° |
| C5' | C4' | H7 | 109.2° | 109.9° |
| C5' | O5' | P | 119.2° | 123.0° |
| O5' | C5' | H5 | 109.4° | 109.5° |
| O5' | C5' | H6 | 109.3° | 109.5° |
| O5' | P | OP2 | 108.8° | 109.5° |
| O5' | P | SP3 | 110.5° | 109.4° |
| O5' | P | OP3 | 108.2° | 109.5° |
| OP2 | P | SP3 | 109.5° | 109.5° |
| OP2 | P | OP3 | 110.4° | 109.5° |
| SP3 | P | OP3 | 109.4° | 109.5° |
| P | SP3 | H1 | 102.0° | 103.0° |
| P | OP3 | H2 | 109.5° | 114.0° |
| H3 | C2' | H4 | 109.4° | 110.8° |
| H5 | C5' | H6 | 109.5° | 109.5° |
| H8 | C1' | H9 | 109.5° | 110.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2' | C1' | O4' | H8 | 119.2° | 118.5° |
| C2' | C1' | O4' | H9 | 119.2° | 118.5° |
| C1' | C2' | C3' | H3 | 119.4° | 118.2° |
| C1' | C2' | C3' | H4 | 119.4° | 118.3° |
| C2' | C1' | O4' | C4' | 24.6° | 40.1° |
| C1' | C2' | C3' | O3' | 80.7° | 97.8° |
| C1' | C2' | C3' | C4' | 34.2° | 20.9° |
| C1' | C2' | H3 | H4 | 121.8° | 123.7° |
| C2' | C1' | H8 | H9 | 122.4° | 123.0° |
| C1' | C2' | C3' | H10 | 152.8° | 139.5° |
| O4' | C1' | C2' | C3' | 35.6° | 37.0° |
| C1' | O4' | C4' | C3' | 2.3° | 26.5° |
| C1' | O4' | C4' | C5' | 120.4° | 146.0° |
| O4' | C1' | C2' | H3 | 155.0° | 155.2° |
| O4' | C1' | C2' | H4 | 83.7° | 81.2° |
| C1' | O4' | C4' | H7 | 118.5° | 93.1° |
| O4' | C1' | H8 | H9 | 122.4° | 123.0° |
| C2' | C3' | C4' | O4' | 18.0° | 2.1° |
| C2' | C3' | O3' | C4' | 110.0° | 114.7° |
| C2' | C3' | O3' | H10 | 125.4° | 122.7° |
| C2' | C3' | C4' | H10 | 119.4° | 118.7° |
| C2' | C3' | C4' | C5' | 99.1° | 121.5° |
| C3' | C2' | H3 | H4 | 121.8° | 123.6° |
| C2' | C3' | C4' | H7 | 141.5° | 117.4° |
| C3' | C2' | C1' | H8 | 154.8° | 155.5° |
| C3' | C2' | C1' | H9 | 83.5° | 81.5° |
| C2' | C3' | O3' | H11 | 180.0° | 61.5° |
| O4' | C4' | C3' | O3' | 96.1° | 120.7° |
| O4' | C4' | C3' | C5' | 117.2° | 119.4° |
| O4' | C4' | C3' | H7 | 123.5° | 119.5° |
| O4' | C4' | C5' | H7 | 123.7° | 120.9° |
| O4' | C4' | C5' | O5' | 175.2° | 66.7° |
| O4' | C4' | C5' | H5 | 55.1° | 53.3° |
| O4' | C4' | C5' | H6 | 64.7° | 173.3° |
| C4' | O4' | C1' | H8 | 143.8° | 158.6° |
| C4' | O4' | C1' | H9 | 94.6° | 78.5° |
| O4' | C4' | C3' | H10 | 137.4° | 116.6° |
| O3' | C3' | C4' | H10 | 126.5° | 122.7° |
| O3' | C3' | C4' | C5' | 146.7° | 119.9° |
| O3' | C3' | C2' | H3 | 38.7° | 20.5° |
| O3' | C3' | C2' | H4 | 159.9° | 144.0° |
| O3' | C3' | C4' | H7 | 27.4° | 1.2° |
| C3' | C4' | C5' | H7 | 119.2° | 121.2° |
| C3' | C4' | C5' | O5' | 58.0° | 175.5° |
| C4' | C3' | C2' | H3 | 153.6° | 139.1° |
| C4' | C3' | C2' | H4 | 85.2° | 97.4° |
| C3' | C4' | C5' | H5 | 62.1° | 64.5° |
| C3' | C4' | C5' | H6 | 178.1° | 55.5° |
| C4' | C3' | O3' | H11 | 70.0° | 176.2° |
| C4' | C5' | O5' | H5 | 120.1° | 120.0° |
| C4' | C5' | O5' | H6 | 120.1° | 119.9° |
| C4' | C5' | O5' | P | 155.7° | 179.9° |
| C4' | C5' | H5 | H6 | 119.8° | 119.9° |
| C5' | C4' | C3' | H10 | 20.2° | 2.8° |
| C5' | O5' | P | OP2 | 104.4° | 55.0° |
| C5' | O5' | P | SP3 | 15.8° | 65.0° |
| C5' | O5' | P | OP3 | 135.6° | 175.0° |
| O5' | C5' | H5 | H6 | 119.8° | 120.1° |
| O5' | C5' | C4' | H7 | 61.1° | 54.2° |
| O5' | P | OP2 | SP3 | 120.9° | 120.0° |
| O5' | P | OP2 | OP3 | 118.6° | 120.1° |
| O5' | P | SP3 | OP3 | 119.1° | 120.0° |
| O5' | P | SP3 | H1 | 119.8° | 60.0° |
| O5' | P | OP3 | H2 | 118.9° | 180.0° |
| P | O5' | C5' | H5 | 84.2° | 60.1° |
| P | O5' | C5' | H6 | 35.6° | 60.0° |
| OP2 | P | SP3 | OP3 | 121.2° | 120.0° |
| OP2 | P | SP3 | H1 | 0.0° | 180.0° |
| OP2 | P | OP3 | H2 | 0.0° | 60.0° |
| SP3 | P | OP3 | H2 | 120.6° | 60.0° |
| OP3 | P | SP3 | H1 | 121.1° | 60.0° |
| H3 | C2' | C1' | H8 | 85.8° | 86.3° |
| H3 | C2' | C1' | H9 | 35.9° | 36.7° |
| H3 | C2' | C3' | H10 | 87.8° | 102.2° |
| H4 | C2' | C1' | H8 | 35.4° | 37.3° |
| H4 | C2' | C1' | H9 | 157.1° | 160.3° |
| H4 | C2' | C3' | H10 | 33.4° | 21.3° |
| H5 | C5' | C4' | H7 | 178.8° | 174.2° |
| H6 | C5' | C4' | H7 | 58.9° | 65.7° |
| H7 | C4' | C3' | H10 | 99.1° | 123.9° |
| H10 | C3' | O3' | H11 | 54.7° | 61.1° |
