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DUQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O4C4doub1.22Å1.24Å
C4N3sing1.35Å1.34Å
C4C5sing1.42Å1.40Å
N3C2sing1.35Å1.34Å
C2O2doub1.22Å1.27Å
C2N1sing1.35Å1.40Å
C5C6doub1.35Å1.40Å
C6N1sing1.37Å1.35Å
N1C1'sing1.47Å1.46Å
C1'C1sing1.53Å1.57Å
C1C38sing1.51Å1.52Å
C1C4'sing1.53Å1.54Å
C38N34sing1.35Å1.33Å
C38O38doub1.21Å1.22Å
N34C39sing1.47Å1.46Å
C39C40sing1.53Å1.52Å
C40O37sing1.43Å1.43Å
C4'C5'sing1.53Å1.56Å
C5'O1sing1.43Å1.45Å
O1C17sing1.43Å1.45Å
C17C30sing1.51Å1.54Å
C17C24sing1.51Å1.52Å
C17C18sing1.51Å1.51Å
C30C31sing1.38Å1.42ÅAromatic
C30C35doub1.38Å1.39ÅAromatic
C31C32doub1.38Å1.40ÅAromatic
C32C33sing1.38Å1.41ÅAromatic
C33C34doub1.38Å1.40ÅAromatic
C34C35sing1.38Å1.41ÅAromatic
C24C25sing1.38Å1.41ÅAromatic
C24C29doub1.38Å1.42ÅAromatic
C25C26doub1.38Å1.40ÅAromatic
C26C27sing1.38Å1.41ÅAromatic
C27C28doub1.38Å1.40ÅAromatic
C28C29sing1.38Å1.41ÅAromatic
C18C19sing1.38Å1.39ÅAromatic
C18C23doub1.38Å1.41ÅAromatic
C19C20doub1.38Å1.38ÅAromatic
C20C21sing1.38Å1.39ÅAromatic
C21C22doub1.38Å1.39ÅAromatic
C22C23sing1.38Å1.39ÅAromatic
N3H3sing0.97Å1.00Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C1'H1'1sing1.09Å1.10Å
C1'H1'2sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C4'H4'1sing1.09Å1.10Å
C4'H4'2sing1.09Å1.10Å
N34H34sing0.97Å1.00Å
C39H391sing1.09Å1.10Å
C39H392sing1.09Å1.10Å
C40H401sing1.09Å1.10Å
C40H402sing1.09Å1.10Å
O37H37sing0.97Å0.95Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
C31H31sing1.08Å1.08Å
C35H35sing1.08Å1.08Å
C32H32sing1.08Å1.08Å
C33H33sing1.08Å1.08Å
C34HAsing1.08Å1.08Å
C25H25sing1.08Å1.08Å
C29H29sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O4C4N3117.7°120.3°
O4C4C5120.2°120.3°
N3C4C5122.1°119.4°
C4N3C2120.6°120.3°
C4N3H3119.7°119.9°
C4C5C6117.4°119.1°
C4C5H5121.3°120.5°
N3C2O2120.8°119.5°
N3C2N1119.1°120.9°
C2N3H3119.7°119.9°
O2C2N1120.1°119.5°
C2N1C6121.5°120.6°
C2N1C1'117.4°119.7°
C5C6N1119.3°119.7°
C6C5H5121.3°120.4°
C5C6H6120.3°120.1°
C6N1C1'121.0°119.7°
N1C6H6120.3°120.2°
N1C1'C1108.1°109.4°
N1C1'H1'1109.9°109.5°
N1C1'H1'2110.3°109.5°
C1'C1C38107.8°109.5°
C1'C1C4'115.8°109.4°
C1C1'H1'1109.9°109.5°
C1C1'H1'2110.2°109.4°
C1'C1H1105.3°109.5°
C38C1C4'106.2°109.5°
C1C38N34117.4°120.0°
C1C38O38119.8°120.0°
C38C1H1115.1°109.5°
C1C4'C5'118.9°109.4°
C4'C1H1107.0°109.5°
C1C4'H4'1106.4°109.5°
C1C4'H4'2104.3°109.5°
N34C38O38122.8°120.0°
C38N34C39127.4°120.0°
C38N34H34116.3°120.0°
N34C39C40102.2°109.5°
C39N34H34116.3°120.0°
N34C39H391112.0°109.5°
N34C39H392113.5°109.5°
C39C40O37104.8°109.5°
C40C39H391112.0°109.5°
C40C39H392113.5°109.5°
C39C40H401111.1°109.5°
C39C40H402112.1°109.5°
O37C40H401111.0°109.5°
O37C40H402112.1°109.5°
C40O37H37109.5°114.0°
C4'C5'O1112.5°109.5°
C5'C4'H4'1106.5°109.4°
C5'C4'H4'2104.3°109.5°
C4'C5'H5'1108.5°109.5°
C4'C5'H5'2107.8°109.5°
C5'O1C17121.2°114.0°
O1C5'H5'1108.4°109.4°
O1C5'H5'2107.8°109.5°
O1C17C30106.4°109.5°
O1C17C24107.5°109.5°
O1C17C18108.8°109.5°
C30C17C24114.9°109.5°
C30C17C18114.8°109.5°
C17C30C31122.1°120.0°
C17C30C35120.0°120.0°
C24C17C18104.1°109.5°
C17C24C25123.0°120.0°
C17C24C29118.8°120.0°
C17C18C19121.7°120.0°
C17C18C23119.2°120.0°
C31C30C35117.8°120.0°
C30C31C32121.3°120.0°
C30C31H31119.4°120.0°
C30C35C34121.6°120.0°
C30C35H35119.2°120.0°
C31C32C33120.0°120.0°
C32C31H31119.3°120.0°
C31C32H32120.0°120.0°
C32C33C34119.3°120.0°
C33C32H32120.0°120.0°
C32C33H33120.3°120.0°
C33C34C35120.0°120.0°
C34C33H33120.4°120.0°
C33C34HA120.0°120.1°
C34C35H35119.2°120.0°
C35C34HA120.0°120.0°
C25C24C29118.2°120.0°
C24C25C26120.0°120.0°
C24C25H25120.0°120.0°
C24C29C28121.7°120.0°
C24C29H29119.2°120.0°
C25C26C27121.4°120.0°
C26C25H25120.0°120.0°
C25C26H26119.3°120.0°
C26C27C28119.2°120.0°
C27C26H26119.3°120.0°
C26C27H27120.4°120.0°
C27C28C29119.3°120.0°
C28C27H27120.4°120.0°
C27C28H28120.3°120.0°
C28C29H29119.1°119.9°
C29C28H28120.3°120.1°
C19C18C23119.0°120.0°
C18C19C20119.5°120.0°
C18C19H19120.3°120.0°
C18C23C22121.3°120.0°
C18C23H23119.4°120.0°
C19C20C21121.1°120.0°
C20C19H19120.3°120.0°
C19C20H20119.4°120.0°
C20C21C22120.6°120.0°
C21C20H20119.5°120.0°
C20C21H21119.7°120.0°
C21C22C23118.5°120.0°
C22C21H21119.7°120.0°
C21C22H22120.7°120.0°
C22C23H23119.4°120.0°
C23C22H22120.8°120.0°
H1'1C1'H1'2108.4°109.5°
H4'1C4'H4'2117.2°109.5°
H391C39H392104.0°109.5°
H401C40H402105.9°109.5°
H5'1C5'H5'2111.9°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O4C4N3C5178.9°179.8°
O4C4N3C2178.0°180.0°
O4C4C5C6178.5°179.9°
O4C4N3H32.0°0.0°
O4C4C5H51.5°0.0°
C4N3C2H3180.0°180.0°
C4N3C2O2179.6°179.9°
C4N3C2N10.9°0.0°
N3C4C5C60.4°0.3°
N3C4C5H5179.6°179.8°
C5C4N3C20.9°0.2°
C4C5C6H5180.0°180.0°
C4C5C6N10.0°0.0°
C5C4N3H3179.1°179.8°
C4C5C6H6180.0°180.0°
N3C2O2N1178.6°180.0°
N3C2N1C60.5°0.3°
N3C2N1C1'177.6°180.0°
O2C2N1C6179.1°179.7°
O2C2N1C1'3.7°0.1°
O2C2N3H30.4°0.1°
C2N1C6C50.0°0.2°
C2N1C6C1'177.0°179.8°
C2N1C1'C188.6°83.7°
N1C2N3H3179.0°179.9°
C2N1C6H6180.0°179.8°
C2N1C1'H1'131.4°156.3°
C2N1C1'H1'2150.9°36.2°
C5C6N1H6180.0°180.0°
C5C6N1C1'177.1°180.0°
C6N1C1'C188.6°96.0°
N1C6C5H5180.0°180.0°
C6N1C1'H1'1151.4°23.9°
C6N1C1'H1'232.0°144.0°
N1C1'C1H1'1120.0°120.0°
N1C1'C1H1'2120.6°120.0°
N1C1'C1C38159.7°64.6°
N1C1'C1C4'41.0°175.4°
C1'N1C6H63.0°0.0°
N1C1'H1'1H1'2120.6°120.0°
N1C1'C1H177.0°55.4°
C1'C1C38C4'124.7°120.0°
C1'C1C38H1117.2°120.0°
C1'C1C4'H1117.0°120.0°
C1'C1C38N34134.1°142.7°
C1'C1C38O3845.1°37.4°
C1'C1C4'C5'168.2°175.3°
C1C1'H1'1H1'2120.6°120.0°
C1'C1C4'H4'148.2°64.7°
C1'C1C4'H4'276.3°55.3°
C38C1C4'H1123.4°120.0°
C1C38N34O38179.1°180.0°
C1C38N34C39179.8°175.0°
C38C1C4'C5'48.6°64.7°
C38C1C1'H1'180.3°55.4°
C38C1C1'H1'239.1°175.5°
C38C1C4'H4'171.4°55.3°
C38C1C4'H4'2164.1°175.3°
C1C38N34H340.2°5.0°
C4'C1C38N34101.2°97.4°
C4'C1C38O3879.6°82.6°
C1C4'C5'H4'1120.0°120.0°
C1C4'C5'H4'2115.5°120.0°
C1C4'C5'O150.8°174.7°
C4'C1C1'H1'1161.0°64.6°
C4'C1C1'H1'279.6°55.5°
C1C4'H4'1H4'2116.1°120.0°
C1C4'C5'H5'169.2°54.7°
C1C4'C5'H5'2169.4°65.3°
C38N34C39H34180.0°179.9°
C38N34C39C40160.6°174.9°
N34C38C1H116.9°22.7°
C38N34C39H39179.4°54.9°
C38N34C39H39238.0°65.1°
O38C38N34C390.6°4.9°
O38C38C1H1162.3°157.4°
O38C38N34H34179.3°175.0°
N34C39C40H391120.0°120.0°
N34C39C40H392122.6°120.0°
N34C39C40O3785.2°63.7°
N34C39H391H392122.9°120.0°
N34C39C40H40134.8°176.3°
N34C39C40H402153.0°56.3°
C39C40O37H401120.0°120.0°
C39C40O37H402121.8°120.0°
C40C39N34H3419.4°5.0°
C40C39H391H392122.9°120.0°
C39C40H401H402121.9°120.0°
C39C40O37H3717.2°180.0°
O37C40C39H391154.8°56.3°
O37C40C39H39237.4°176.3°
O37C40H401H402121.9°120.0°
C4'C5'O1H5'1120.0°120.0°
C4'C5'O1H5'2118.7°120.0°
C4'C5'O1C17101.4°175.4°
C5'C4'C1H174.8°55.4°
C5'C4'H4'1H4'2116.1°120.0°
C4'C5'H5'1H5'2118.8°120.0°
C5'O1C17C3049.2°66.1°
C5'O1C17C24172.8°53.9°
C5'O1C17C1875.1°173.8°
O1C5'C4'H4'1170.8°65.4°
O1C5'C4'H4'264.7°54.7°
O1C5'H5'1H5'2118.7°120.0°
O1C17C30C24118.8°120.0°
O1C17C30C18120.5°120.0°
O1C17C24C18115.3°120.0°
O1C17C30C31101.5°21.4°
O1C17C30C3575.5°158.3°
O1C17C24C25164.1°85.1°
O1C17C24C2917.0°94.6°
O1C17C18C19164.0°18.5°
O1C17C18C2316.5°161.2°
C17O1C5'H5'1138.6°64.6°
C17O1C5'H5'217.3°55.4°
C30C17C24C18126.5°120.0°
C17C30C31C35177.1°179.7°
C17C30C31C32177.2°180.0°
C17C30C35C34178.1°179.8°
C30C17C24C2545.9°34.9°
C30C17C24C29135.2°145.4°
C30C17C18C1944.9°138.5°
C30C17C18C23135.7°41.2°
C17C30C31H312.9°0.0°
C17C30C35H351.9°0.0°
C24C17C30C31139.7°141.4°
C24C17C30C3543.3°38.3°
C17C24C25C29178.9°179.7°
C17C24C25C26179.6°180.0°
C17C24C29C28179.6°179.8°
C24C17C18C1981.6°101.5°
C24C17C18C2397.8°78.8°
C17C24C25H250.4°0.1°
C17C24C29H290.4°0.0°
C18C17C30C3118.9°98.6°
C18C17C30C35164.0°81.7°
C18C17C24C2580.5°155.0°
C18C17C24C2998.3°25.3°
C17C18C19C23179.4°179.7°
C17C18C19C20178.5°180.0°
C17C18C23C22179.6°179.8°
C17C18C19H191.5°0.1°
C17C18C23H230.3°0.0°
C30C31C32H31180.0°179.9°
C30C31C32C330.2°0.0°
C31C30C35C340.9°0.5°
C31C30C35H35179.1°179.8°
C30C31C32H32179.8°180.0°
C35C30C31C320.0°0.3°
C30C35C34C331.6°0.4°
C30C35C34H35180.0°179.8°
C35C30C31H31180.0°179.8°
C30C35C34HA178.4°179.7°
C31C32C33H32180.0°180.0°
C31C32C33C340.4°0.1°
C31C32C33H33179.6°180.0°
C32C33C34H33180.0°179.9°
C32C33C34C351.3°0.1°
C33C32C31H31179.8°180.0°
C32C33C34HA178.7°180.0°
C33C34C35HA180.0°179.9°
C33C34C35H35178.4°179.8°
C34C33C32H32179.6°179.9°
C35C34C33H33178.7°179.8°
C24C25C26H25180.0°179.9°
C24C25C26C271.4°0.1°
C25C24C29C280.7°0.5°
C25C24C29H29179.3°179.7°
C24C25C26H26178.6°179.9°
C29C24C25C261.5°0.3°
C24C29C28C270.4°0.4°
C24C29C28H29180.0°179.8°
C29C24C25H25178.4°179.8°
C24C29C28H28179.6°179.7°
C25C26C27H26180.0°180.0°
C25C26C27C280.4°0.0°
C25C26C27H27179.6°180.0°
C26C27C28H27180.0°180.0°
C26C27C28C290.5°0.2°
C27C26C25H25178.6°180.0°
C26C27C28H28179.5°179.9°
C27C28C29H28180.0°179.9°
C27C28C29H29179.6°179.7°
C28C27C26H26179.6°180.0°
C29C28C27H27179.5°179.9°
C18C19C20H19180.0°179.9°
C18C19C20C211.8°0.1°
C19C18C23C220.9°0.5°
C19C18C23H23179.1°179.7°
C18C19C20H20178.2°179.9°
C23C18C19C200.9°0.3°
C18C23C22C211.9°0.4°
C18C23C22H23180.0°179.8°
C23C18C19H19179.1°179.8°
C18C23C22H22178.0°179.8°
C19C20C21H20180.0°180.0°
C19C20C21C220.8°0.0°
C19C20C21H21179.2°180.0°
C20C21C22H21180.0°180.0°
C20C21C22C231.1°0.2°
C21C20C19H19178.2°180.0°
C20C21C22H22178.9°180.0°
C21C22C23H22180.0°179.8°
C21C22C23H23178.1°179.8°
C22C21C20H20179.2°180.0°
C23C22C21H21178.9°179.8°
H5C5C6H60.1°0.0°
H1'1C1'C1H143.0°175.5°
H1'2C1'C1H1162.5°64.5°
H1C1C4'H4'1165.2°175.3°
H1C1C4'H4'240.8°64.6°
H4'1C4'C5'H5'150.8°174.7°
H4'1C4'C5'H5'270.6°54.6°
H4'2C4'C5'H5'1175.3°65.3°
H4'2C4'C5'H5'253.9°174.7°
H34N34C39H391100.6°125.0°
H34N34C39H392142.0°115.0°
H391C39C40H40185.2°63.7°
H391C39C40H40233.0°176.3°
H392C39C40H401157.4°56.3°
H392C39C40H40284.4°63.7°
H401C40O37H37137.2°60.0°
H402C40O37H37104.6°60.0°
H31C31C32H320.2°0.0°
H35C35C34HA1.6°0.1°
H32C32C33H330.4°0.0°
H33C33C34HA1.3°0.1°
H25C25C26H261.5°0.1°
H29C29C28H280.4°0.1°
H26C26C27H270.4°0.0°
H27C27C28H280.5°0.0°
H19C19C20H201.7°0.1°
H23C23C22H221.9°0.0°
H20C20C21H210.8°0.0°
H21C21C22H221.1°0.0°

222624

PDB entries from 2024-07-17

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