DTY
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.44Å | 1.47Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | C | sing | 1.52Å | 1.53Å | |
CA | CB | sing | 1.53Å | 1.51Å | |
CA | HA | sing | 1.10Å | 1.12Å | |
C | O | doub | 1.23Å | 1.22Å | |
C | OXT | sing | 1.35Å | 40.03Å | |
CB | CG | sing | 1.51Å | 1.52Å | |
CB | HB2 | sing | 1.10Å | 1.12Å | |
CB | HB3 | sing | 1.10Å | 1.12Å | |
CG | CD1 | doub | 1.39Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.40Å | 1.38Å | Aromatic |
CD1 | HD1 | sing | 1.09Å | 1.10Å | |
CD2 | CE2 | doub | 1.40Å | 1.39Å | Aromatic |
CD2 | HD2 | sing | 1.09Å | 1.10Å | |
CE1 | CZ | doub | 1.40Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.09Å | 1.10Å | |
CE2 | CZ | sing | 1.39Å | 1.37Å | Aromatic |
CE2 | HE2 | sing | 1.09Å | 1.10Å | |
CZ | OH | sing | 1.36Å | 1.38Å | |
OH | HH | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.98Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 106.2° | 119.0° |
CA | N | H2 | 113.5° | 119.0° |
N | CA | C | 106.2° | 111.0° |
N | CA | CB | 112.5° | 111.4° |
N | CA | HA | 109.8° | 106.1° |
H | N | H2 | 113.3° | 120.6° |
C | CA | CB | 110.2° | 110.0° |
C | CA | HA | 112.3° | 106.9° |
CA | C | O | 123.6° | 123.0° |
CA | C | OXT | 67.5° | 114.8° |
CB | CA | HA | 105.9° | 111.4° |
CA | CB | CG | 110.0° | 112.9° |
CA | CB | HB2 | 112.0° | 110.4° |
CA | CB | HB3 | 112.0° | 110.1° |
O | C | OXT | 132.9° | 122.2° |
C | OXT | HXT | 67.5° | 114.9° |
CG | CB | HB2 | 112.0° | 108.0° |
CG | CB | HB3 | 112.0° | 109.7° |
CB | CG | CD1 | 119.2° | 119.3° |
CB | CG | CD2 | 121.0° | 119.3° |
HB2 | CB | HB3 | 98.4° | 105.3° |
CD1 | CG | CD2 | 119.7° | 121.3° |
CG | CD1 | CE1 | 122.1° | 119.3° |
CG | CD1 | HD1 | 119.5° | 121.2° |
CG | CD2 | CE2 | 117.6° | 119.3° |
CG | CD2 | HD2 | 121.1° | 121.2° |
CE1 | CD1 | HD1 | 118.4° | 119.5° |
CD1 | CE1 | CZ | 118.0° | 120.0° |
CD1 | CE1 | HE1 | 120.7° | 119.6° |
CE2 | CD2 | HD2 | 121.3° | 119.5° |
CD2 | CE2 | CZ | 122.3° | 120.0° |
CD2 | CE2 | HE2 | 119.6° | 119.6° |
CZ | CE1 | HE1 | 121.3° | 120.4° |
CE1 | CZ | CE2 | 120.2° | 120.0° |
CE1 | CZ | OH | 117.5° | 120.0° |
CZ | CE2 | HE2 | 118.1° | 120.4° |
CE2 | CZ | OH | 122.3° | 120.0° |
CZ | OH | HH | 117.5° | 110.2° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 125.3° | 166.3° |
N | CA | C | CB | 122.1° | 123.7° |
N | CA | C | HA | 120.1° | 115.2° |
N | CA | CB | HA | 120.0° | 118.2° |
N | CA | C | O | 93.1° | 34.8° |
N | CA | C | OXT | 34.4° | 145.7° |
N | CA | CB | CG | 167.6° | 158.2° |
N | CA | CB | HB2 | 67.1° | 80.7° |
N | CA | CB | HB3 | 42.4° | 35.1° |
H | N | CA | C | 180.0° | 158.2° |
H | N | CA | CB | 59.4° | 35.3° |
H | N | CA | HA | 58.3° | 86.1° |
H2 | N | CA | C | 54.8° | 35.3° |
H2 | N | CA | CB | 175.4° | 158.2° |
H2 | N | CA | HA | 66.9° | 80.4° |
C | CA | CB | HA | 121.6° | 118.4° |
CA | C | O | OXT | 89.4° | 179.5° |
C | CA | CB | CG | 74.1° | 78.3° |
C | CA | CB | HB2 | 51.2° | 42.8° |
C | CA | CB | HB3 | 160.7° | 158.6° |
CA | C | OXT | HXT | 180.0° | 179.6° |
CB | CA | C | O | 29.1° | 88.9° |
CB | CA | C | OXT | 156.5° | 90.7° |
CA | CB | CG | HB2 | 125.2° | 122.4° |
CA | CB | CG | HB3 | 125.2° | 123.3° |
CA | CB | HB2 | HB3 | 117.9° | 118.8° |
CA | CB | CG | CD1 | 72.1° | 90.0° |
CA | CB | CG | CD2 | 107.4° | 90.0° |
HA | CA | C | O | 146.8° | 150.0° |
HA | CA | C | OXT | 85.7° | 30.4° |
HA | CA | CB | CG | 47.6° | 40.0° |
HA | CA | CB | HB2 | 172.9° | 161.1° |
HA | CA | CB | HB3 | 77.7° | 83.0° |
O | C | OXT | HXT | 64.4° | 0.1° |
CG | CB | HB2 | HB3 | 118.0° | 117.2° |
CB | CG | CD1 | CD2 | 179.5° | 180.0° |
CB | CG | CD1 | CE1 | 179.8° | 180.0° |
CB | CG | CD1 | HD1 | 0.2° | 0.1° |
CB | CG | CD2 | CE2 | 179.8° | 179.9° |
CB | CG | CD2 | HD2 | 0.2° | 0.0° |
HB2 | CB | CG | CD1 | 162.7° | 147.5° |
HB2 | CB | CG | CD2 | 17.8° | 32.4° |
HB3 | CB | CG | CD1 | 53.1° | 33.2° |
HB3 | CB | CG | CD2 | 127.4° | 146.7° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.3° | 0.0° |
CD1 | CG | CD2 | HD2 | 179.7° | 180.0° |
CG | CD1 | CE1 | CZ | 0.4° | 0.0° |
CG | CD1 | CE1 | HE1 | 179.7° | 180.0° |
CD2 | CG | CD1 | CE1 | 0.7° | 0.0° |
CD2 | CG | CD1 | HD1 | 179.3° | 180.0° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.9° |
CG | CD2 | CE2 | CZ | 0.3° | 0.1° |
CG | CD2 | CE2 | HE2 | 179.7° | 180.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 180.0° |
CD1 | CE1 | CZ | CE2 | 0.2° | 0.0° |
CD1 | CE1 | CZ | OH | 179.7° | 179.9° |
HD1 | CD1 | CE1 | CZ | 179.6° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.3° | 0.1° |
CD2 | CE2 | CZ | CE1 | 0.6° | 0.1° |
CD2 | CE2 | CZ | HE2 | 180.0° | 180.0° |
CD2 | CE2 | CZ | OH | 180.0° | 179.9° |
HD2 | CD2 | CE2 | CZ | 179.7° | 180.0° |
HD2 | CD2 | CE2 | HE2 | 0.3° | 0.0° |
CE1 | CZ | CE2 | OH | 179.4° | 179.9° |
CE1 | CZ | CE2 | HE2 | 179.4° | 180.0° |
CE1 | CZ | OH | HH | 180.0° | 71.3° |
HE1 | CE1 | CZ | CE2 | 179.7° | 179.9° |
HE1 | CE1 | CZ | OH | 0.3° | 0.1° |
CE2 | CZ | OH | HH | 0.5° | 108.8° |
HE2 | CE2 | CZ | OH | 0.1° | 0.1° |