Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | HN2 | sing | 1.01Å | 1.02Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.11Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | OXT | sing | 1.34Å | 1.26Å | |
CB | CG | sing | 1.51Å | 1.52Å | |
CB | HB1 | sing | 1.09Å | 1.11Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CG | OD1 | doub | 1.21Å | 1.25Å | |
CG | OD2 | sing | 1.34Å | 1.25Å | |
OD2 | HOD | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 110.7° | 106.8° |
CA | N | HN2 | 111.7° | 106.7° |
N | CA | C | 110.8° | 109.4° |
N | CA | CB | 110.4° | 109.5° |
N | CA | HA | 108.2° | 109.5° |
H | N | HN2 | 111.8° | 106.7° |
C | CA | CB | 109.9° | 109.5° |
C | CA | HA | 108.6° | 109.5° |
CA | C | O | 117.1° | 120.0° |
CA | C | OXT | 118.4° | 120.0° |
CB | CA | HA | 109.0° | 109.5° |
CA | CB | CG | 113.1° | 109.5° |
CA | CB | HB1 | 110.9° | 109.5° |
CA | CB | HB2 | 110.9° | 109.5° |
O | C | OXT | 124.5° | 120.0° |
C | OXT | HXT | 118.4° | 120.0° |
CG | CB | HB1 | 110.8° | 109.4° |
CG | CB | HB2 | 110.8° | 109.4° |
CB | CG | OD1 | 117.8° | 120.0° |
CB | CG | OD2 | 119.6° | 120.0° |
HB1 | CB | HB2 | 99.5° | 109.5° |
OD1 | CG | OD2 | 122.6° | 120.0° |
CG | OD2 | HOD | 119.6° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | HN2 | 125.3° | 113.8° |
N | CA | C | CB | 122.2° | 120.0° |
N | CA | C | HA | 118.6° | 120.0° |
N | CA | CB | HA | 118.6° | 120.0° |
N | CA | C | O | 3.1° | 30.0° |
N | CA | C | OXT | 177.0° | 150.0° |
N | CA | CB | CG | 68.0° | 60.0° |
N | CA | CB | HB1 | 57.2° | 180.0° |
N | CA | CB | HB2 | 166.7° | 60.0° |
H | N | CA | C | 179.9° | 53.8° |
H | N | CA | CB | 58.0° | 173.7° |
H | N | CA | HA | 61.2° | 66.3° |
HN2 | N | CA | C | 54.7° | 60.0° |
HN2 | N | CA | CB | 176.6° | 59.9° |
HN2 | N | CA | HA | 64.2° | 180.0° |
C | CA | CB | HA | 118.9° | 120.0° |
CA | C | O | OXT | 179.9° | 180.0° |
C | CA | CB | CG | 54.4° | 180.0° |
C | CA | CB | HB1 | 179.6° | 60.1° |
C | CA | CB | HB2 | 70.8° | 60.0° |
CA | C | OXT | HXT | 180.0° | 179.9° |
CB | CA | C | O | 125.3° | 90.0° |
CB | CA | C | OXT | 54.8° | 90.0° |
CA | CB | CG | HB1 | 125.3° | 120.0° |
CA | CB | CG | HB2 | 125.3° | 120.0° |
CA | CB | HB1 | HB2 | 116.8° | 120.1° |
CA | CB | CG | OD1 | 177.1° | 0.0° |
CA | CB | CG | OD2 | 3.1° | 180.0° |
HA | CA | C | O | 115.6° | 150.0° |
HA | CA | C | OXT | 64.4° | 30.0° |
HA | CA | CB | CG | 173.3° | 60.0° |
HA | CA | CB | HB1 | 61.5° | 60.0° |
HA | CA | CB | HB2 | 48.1° | 180.0° |
O | C | OXT | HXT | 0.1° | 0.1° |
CG | CB | HB1 | HB2 | 116.7° | 119.9° |
CB | CG | OD1 | OD2 | 179.8° | 179.9° |
CB | CG | OD2 | HOD | 180.0° | 179.9° |
HB1 | CB | CG | OD1 | 51.8° | 119.9° |
HB1 | CB | CG | OD2 | 128.4° | 60.0° |
HB2 | CB | CG | OD1 | 57.6° | 120.1° |
HB2 | CB | CG | OD2 | 122.2° | 60.0° |
OD1 | CG | OD2 | HOD | 0.2° | 0.0° |