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DRZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
POP1doub1.50Å1.49Å
POP2sing1.62Å1.48Å
POP3sing1.62Å51.72Å
PO5'sing1.62Å1.60Å
OP2HOP2sing0.98Å0.95Å
OP3HOP3sing0.98Å0.95Å
O5'C5'sing1.43Å1.42Å
C5'C4'sing1.53Å1.54Å
C5'H5'sing1.09Å1.12Å
C5'H5''sing1.10Å1.11Å
C4'O4'sing1.43Å1.40Å
C4'C3'sing1.54Å1.54Å
C4'H4'sing1.10Å1.11Å
O4'H4'Osing0.97Å0.95Å
C3'C2'sing1.53Å1.55Å
C3'O3'sing1.43Å1.43Å
C3'H3'sing1.10Å1.11Å
C2'C1'sing1.51Å1.52Å
C2'H2'sing1.10Å1.12Å
C2'H2''sing1.10Å1.11Å
C1'O1doub1.23Å1.21Å
C1'H1'sing1.10Å1.10Å
O3'HO3'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OP1POP2119.5°115.3°
OP1POP3104.4°115.0°
OP1PO5'107.2°115.1°
OP2POP369.5°103.3°
OP2PO5'110.1°103.8°
POP2HOP2119.5°118.8°
OP3PO5'49.7°102.7°
POP3HOP3104.4°118.9°
PO5'C5'121.7°118.2°
O5'C5'C4'110.5°109.6°
O5'C5'H5'111.8°107.2°
O5'C5'H5''111.8°107.5°
C4'C5'H5'111.8°111.6°
C4'C5'H5''111.8°112.0°
C5'C4'O4'107.0°108.4°
C5'C4'C3'107.0°114.4°
C5'C4'H4'123.0°109.7°
H5'C5'H5''98.6°108.8°
O4'C4'C3'128.6°108.5°
O4'C4'H4'96.3°105.6°
C4'O4'H4'O107.0°106.2°
C3'C4'H4'96.3°109.8°
C4'C3'C2'108.1°112.2°
C4'C3'O3'111.7°110.0°
C4'C3'H3'108.8°109.3°
C2'C3'O3'109.0°107.9°
C2'C3'H3'111.5°110.4°
C3'C2'C1'135.1°113.0°
C3'C2'H2'103.4°111.2°
C3'C2'H2''103.5°110.6°
O3'C3'H3'107.9°106.9°
C3'O3'HO3'111.7°106.3°
C1'C2'H2'103.4°106.5°
C1'C2'H2''103.4°106.4°
C2'C1'O1158.8°125.0°
C2'C1'H1'131.7°114.8°
H2'C2'H2''105.2°108.9°
O1C1'H1'69.6°120.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OP1POP2OP395.3°126.3°
OP1POP2O5'124.6°126.8°
OP1POP3O5'100.5°125.8°
OP1POP2HOP2179.9°48.8°
OP1POP3HOP3180.0°48.1°
OP1PO5'C5'177.8°180.0°
OP2POP3O5'142.9°107.7°
OP2POP3HOP363.5°78.5°
OP2PO5'C5'50.7°53.1°
OP3POP2HOP284.6°77.5°
OP3PO5'C5'87.7°54.3°
O5'POP2HOP255.3°175.7°
O5'POP3HOP379.4°173.8°
PO5'C5'C4'153.9°180.0°
PO5'C5'H5'80.9°58.7°
PO5'C5'H5''28.6°58.1°
O5'C5'C4'H5'125.3°118.6°
O5'C5'C4'H5''125.3°119.2°
O5'C5'H5'H5''117.7°116.0°
O5'C5'C4'O4'90.9°60.1°
O5'C5'C4'C3'128.3°178.6°
O5'C5'C4'H4'18.7°54.7°
C4'C5'H5'H5''117.7°124.1°
C5'C4'O4'C3'129.4°124.8°
C5'C4'O4'H4'127.3°117.5°
C5'C4'C3'H4'127.3°123.8°
C5'C4'O4'H4'O180.0°178.8°
C5'C4'C3'C2'100.0°176.2°
C5'C4'C3'O3'140.1°63.7°
C5'C4'C3'H3'21.2°53.4°
H5'C5'C4'O4'34.4°178.7°
H5'C5'C4'C3'106.5°60.0°
H5'C5'C4'H4'143.9°63.8°
H5''C5'C4'O4'143.8°59.1°
H5''C5'C4'C3'3.0°62.2°
H5''C5'C4'H4'106.6°173.9°
O4'C4'C3'H4'103.3°115.0°
O4'C4'C3'C2'29.4°55.0°
O4'C4'C3'O3'90.5°175.1°
O4'C4'C3'H3'150.5°67.8°
C3'C4'O4'H4'O50.6°54.0°
C4'C3'C2'O3'121.6°121.3°
C4'C3'C2'H3'119.5°122.1°
C4'C3'O3'H3'119.5°118.6°
C4'C3'C2'C1'112.7°177.9°
C4'C3'C2'H2'12.5°58.2°
C4'C3'C2'H2''122.0°62.9°
C4'C3'O3'HO3'179.9°35.7°
H4'C4'O4'H4'O52.7°63.7°
H4'C4'C3'C2'132.7°60.0°
H4'C4'C3'O3'12.8°60.2°
H4'C4'C3'H3'106.2°177.3°
C2'C3'O3'H3'121.2°118.7°
C3'C2'C1'H2'125.3°122.3°
C3'C2'C1'H2''125.3°121.6°
C3'C2'H2'H2''108.2°122.1°
C3'C2'C1'O165.7°2.4°
C3'C2'C1'H1'114.3°177.9°
C2'C3'O3'HO3'60.6°87.0°
O3'C3'C2'C1'8.8°56.6°
O3'C3'C2'H2'134.1°63.1°
O3'C3'C2'H2''116.4°175.8°
H3'C3'C2'C1'127.8°60.0°
H3'C3'C2'H2'106.9°179.6°
H3'C3'C2'H2''2.5°59.2°
H3'C3'O3'HO3'60.6°154.3°
C1'C2'H2'H2''108.1°114.4°
C2'C1'O1H1'180.0°179.7°
H2'C2'C1'O1169.0°120.0°
H2'C2'C1'H1'11.0°59.7°
H2''C2'C1'O159.6°123.9°
H2''C2'C1'H1'120.4°56.3°

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PDB entries from 2024-09-11

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