Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DPT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.31Å1.33ÅAromatic
N1C1Asing1.33Å1.37ÅAromatic
C2C3sing1.39Å1.41ÅAromatic
C2H2sing1.08Å1.10Å
C3C4doub1.37Å1.35ÅAromatic
C3H3sing1.08Å1.10Å
C4C4Asing1.40Å1.42ÅAromatic
C4C11sing1.51Å1.46Å
C4AC5doub1.41Å1.45ÅAromatic
C4AC1Asing1.41Å1.42ÅAromatic
C5C6sing1.35Å1.35ÅAromatic
C5H5sing1.08Å1.10Å
C6C6Adoub1.41Å1.44ÅAromatic
C6H6sing1.08Å1.10Å
C6AC7sing1.41Å1.40ÅAromatic
C6AC10sing1.41Å1.41ÅAromatic
C7C8doub1.37Å1.37ÅAromatic
C7C12sing1.51Å1.47Å
C8C9sing1.39Å1.40ÅAromatic
C8H8sing1.08Å1.10Å
C9N10doub1.32Å1.34ÅAromatic
C9H9sing1.08Å1.10Å
N10C10sing1.33Å1.38ÅAromatic
C10C1Adoub1.47Å1.43ÅAromatic
C11H111sing1.09Å1.11Å
C11H112sing1.09Å1.12Å
C11H113sing1.09Å1.12Å
C12H121sing1.09Å1.11Å
C12H122sing1.09Å1.12Å
C12H123sing1.09Å1.12Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C1A117.8°121.3°
N1C2C3122.9°121.5°
N1C2H2115.8°119.2°
N1C1AC4A122.6°120.2°
N1C1AC10117.3°121.3°
C3C2H2121.3°119.3°
C2C3C4119.6°119.8°
C2C3H3122.3°120.0°
C4C3H3118.1°120.1°
C3C4C4A120.3°118.3°
C3C4C11118.7°120.8°
C4AC4C11121.0°120.9°
C4C4AC5125.2°121.0°
C4C4AC1A116.8°118.8°
C4C11H111118.7°109.4°
C4C11H112108.9°109.5°
C4C11H113108.9°109.5°
C5C4AC1A118.0°120.2°
C4AC5C6121.5°121.2°
C4AC5H5122.8°119.4°
C4AC1AC10120.1°118.5°
C6C5H5115.7°119.4°
C5C6C6A121.4°121.3°
C5C6H6115.9°119.3°
C6AC6H6122.7°119.4°
C6C6AC7124.1°121.1°
C6C6AC10118.6°120.2°
C7C6AC10117.3°118.8°
C6AC7C8120.5°118.3°
C6AC7C12120.8°120.8°
C6AC10N10122.9°120.3°
C6AC10C1A120.3°118.5°
C8C7C12118.8°120.9°
C7C8C9118.6°119.9°
C7C8H8119.5°120.1°
C7C12H121120.8°109.4°
C7C12H122108.2°109.5°
C7C12H123108.2°109.5°
C9C8H8121.9°120.0°
C8C9N10123.6°121.5°
C8C9H9120.7°119.3°
N10C9H9115.7°119.2°
C9N10C10117.1°121.3°
N10C10C1A116.8°121.2°
H111C11H112108.9°109.5°
H111C11H113108.9°109.4°
H112C11H113101.1°109.6°
H121C12H122108.2°109.5°
H121C12H123108.2°109.5°
H122C12H123101.7°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2C3H2180.0°179.9°
N1C2C3C40.6°0.0°
N1C2C3H3179.4°179.9°
C2N1C1AC4A0.1°0.2°
C2N1C1AC10179.9°180.0°
C1AN1C2C30.3°0.1°
C1AN1C2H2179.7°180.0°
N1C1AC4AC40.1°0.5°
N1C1AC4AC5179.8°180.0°
N1C1AC4AC10180.0°179.8°
N1C1AC10C6A179.9°179.8°
N1C1AC10N100.2°0.3°
C2C3C4H3180.0°180.0°
C2C3C4C4A0.6°0.3°
C2C3C4C11179.8°180.0°
H2C2C3C4179.4°180.0°
H2C2C3H30.6°0.0°
C3C4C4AC11179.5°179.7°
C3C4C4AC5179.9°180.0°
C3C4C4AC1A0.4°0.5°
C3C4C11H111180.0°90.0°
C3C4C11H11254.7°150.1°
C3C4C11H11354.7°29.9°
H3C3C4C4A179.3°179.8°
H3C3C4C110.2°0.0°
C4C4AC5C1A179.7°179.5°
C4C4AC5C6179.9°179.5°
C4C4AC5H50.1°0.5°
C4C4AC1AC10179.9°179.7°
C4AC4C11H1110.5°90.3°
C4AC4C11H112125.7°29.7°
C4AC4C11H113124.8°149.8°
C11C4C4AC50.4°0.3°
C11C4C4AC1A180.0°179.7°
C4C11H111H112125.3°119.9°
C4C11H111H113125.3°119.9°
C4C11H112H113114.6°120.1°
C4AC5C6H5180.0°180.0°
C4AC5C6C6A0.3°0.1°
C4AC5C6H6179.7°179.9°
C5C4AC1AC100.2°0.2°
C1AC4AC5C60.3°0.0°
C1AC4AC5H5179.7°180.0°
C4AC1AC10C6A0.1°0.4°
C4AC1AC10N10179.8°179.9°
C5C6C6AH6180.0°179.9°
C5C6C6AC7179.6°179.9°
C5C6C6AC100.2°0.1°
H5C5C6C6A179.7°180.0°
H5C5C6H60.2°0.1°
C6C6AC7C10179.5°179.8°
C6C6AC7C8180.0°180.0°
C6C6AC7C121.0°0.0°
C6C6AC10N10179.8°179.8°
C6C6AC10C1A0.0°0.4°
H6C6C6AC70.4°0.0°
H6C6C6AC10179.9°179.7°
C6AC7C8C12179.1°180.0°
C6AC7C8C90.6°0.0°
C6AC7C8H8179.4°180.0°
C7C6AC10N100.3°0.4°
C7C6AC10C1A179.6°179.9°
C6AC7C12H121180.0°90.0°
C6AC7C12H12254.7°150.0°
C6AC7C12H12354.7°29.9°
C10C6AC7C80.5°0.2°
C10C6AC7C12179.5°179.8°
C6AC10N10C90.2°0.3°
C6AC10N10C1A179.9°179.5°
C7C8C9H8180.0°179.9°
C7C8C9N100.5°0.0°
C7C8C9H9179.5°180.0°
C8C7C12H1211.0°90.0°
C8C7C12H122124.4°30.0°
C8C7C12H123126.3°150.1°
C12C7C8C9179.6°180.0°
C12C7C8H80.4°0.1°
C7C12H121H122125.3°119.9°
C7C12H121H123125.3°120.0°
C7C12H122H123113.8°120.1°
C8C9N10H9180.0°180.0°
C8C9N10C100.3°0.1°
H8C8C9N10179.5°179.9°
H8C8C9H90.5°0.1°
C9N10C10C1A179.6°179.8°
H9C9N10C10179.7°179.9°
H111C11H112H113114.6°120.0°
H121C12H122H123113.8°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon