DPL
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | CD | sing | 1.47Å | 1.45Å | |
N | H | sing | 1.02Å | 1.00Å | |
CA | C | sing | 1.50Å | 1.54Å | |
CA | CB | sing | 1.52Å | 1.54Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.22Å | 1.24Å | |
C | OXT | sing | 1.36Å | 18.50Å | |
CB | CG | sing | 1.50Å | 1.49Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | CD | sing | 1.50Å | 1.48Å | |
CG | OG1 | doub | 1.22Å | 1.19Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.98Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | CD | 112.4° | 106.6° |
CA | N | H | 108.5° | 112.3° |
N | CA | C | 109.8° | 108.2° |
N | CA | CB | 104.2° | 106.9° |
N | CA | HA | 112.7° | 110.8° |
CD | N | H | 108.5° | 111.6° |
N | CD | CG | 105.5° | 103.0° |
N | CD | HD3 | 111.7° | 111.4° |
N | CD | HD2 | 110.9° | 110.7° |
C | CA | CB | 109.4° | 112.7° |
C | CA | HA | 107.7° | 107.0° |
CA | C | O | 117.9° | 125.0° |
CA | C | OXT | 123.4° | 110.7° |
CB | CA | HA | 113.0° | 111.3° |
CA | CB | CG | 105.5° | 101.0° |
CA | CB | HB2 | 111.7° | 111.6° |
CA | CB | HB3 | 110.8° | 113.3° |
O | C | OXT | 118.6° | 124.3° |
C | OXT | HXT | 123.4° | 112.0° |
CG | CB | HB2 | 111.7° | 108.4° |
CG | CB | HB3 | 110.8° | 110.4° |
CB | CG | CD | 109.5° | 111.6° |
CB | CG | OG1 | 124.5° | 124.2° |
HB2 | CB | HB3 | 106.4° | 111.5° |
CD | CG | OG1 | 125.9° | 124.1° |
CG | CD | HD3 | 111.7° | 109.4° |
CG | CD | HD2 | 110.8° | 110.9° |
HD3 | CD | HD2 | 106.4° | 111.2° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | CD | H | 120.0° | 123.0° |
N | CA | C | CB | 113.8° | 118.0° |
N | CA | C | HA | 123.0° | 119.4° |
N | CA | CB | HA | 122.6° | 121.1° |
N | CA | C | O | 43.9° | 0.6° |
N | CA | C | OXT | 137.2° | 179.6° |
N | CA | CB | CG | 17.0° | 25.6° |
N | CA | CB | HB2 | 104.5° | 89.4° |
N | CA | CB | HB3 | 137.0° | 143.7° |
CA | N | CD | CG | 8.1° | 27.7° |
CA | N | CD | HD3 | 113.4° | 89.4° |
CA | N | CD | HD2 | 128.1° | 146.3° |
CD | N | CA | C | 101.3° | 87.0° |
CD | N | CA | CB | 15.9° | 34.7° |
CD | N | CA | HA | 138.7° | 156.0° |
N | CD | CG | CB | 3.5° | 11.5° |
N | CD | CG | HD3 | 121.5° | 118.6° |
N | CD | CG | HD2 | 120.0° | 118.5° |
N | CD | CG | OG1 | 179.4° | 168.9° |
N | CD | HD3 | HD2 | 121.1° | 124.0° |
H | N | CA | C | 138.8° | 35.6° |
H | N | CA | CB | 104.1° | 157.2° |
H | N | CA | HA | 18.7° | 81.4° |
H | N | CD | CG | 111.9° | 150.7° |
H | N | CD | HD3 | 126.6° | 33.6° |
H | N | CD | HD2 | 8.1° | 90.7° |
C | CA | CB | HA | 120.0° | 120.2° |
CA | C | O | OXT | 178.9° | 179.8° |
C | CA | CB | CG | 100.4° | 93.1° |
C | CA | CB | HB2 | 138.1° | 151.8° |
C | CA | CB | HB3 | 19.6° | 24.9° |
CA | C | OXT | HXT | 180.0° | 179.9° |
CB | CA | C | O | 69.9° | 117.4° |
CB | CA | C | OXT | 108.9° | 62.5° |
CA | CB | CG | HB2 | 121.5° | 117.4° |
CA | CB | CG | HB3 | 120.0° | 120.1° |
CA | CB | HB2 | HB3 | 121.1° | 127.8° |
CA | CB | CG | CD | 12.9° | 8.4° |
CA | CB | CG | OG1 | 171.2° | 171.2° |
HA | CA | C | O | 166.9° | 120.0° |
HA | CA | C | OXT | 14.2° | 60.1° |
HA | CA | CB | CG | 139.6° | 146.7° |
HA | CA | CB | HB2 | 18.1° | 31.6° |
HA | CA | CB | HB3 | 100.4° | 95.3° |
O | C | OXT | HXT | 1.2° | 0.1° |
CG | CB | HB2 | HB3 | 121.1° | 121.8° |
CB | CG | CD | OG1 | 175.9° | 179.6° |
CB | CG | CD | HD3 | 125.0° | 107.1° |
CB | CG | CD | HD2 | 116.5° | 130.0° |
HB2 | CB | CG | CD | 108.6° | 108.9° |
HB2 | CB | CG | OG1 | 67.3° | 71.4° |
HB3 | CB | CG | CD | 132.9° | 128.6° |
HB3 | CB | CG | OG1 | 51.2° | 51.0° |
CG | CD | HD3 | HD2 | 121.1° | 122.8° |
OG1 | CG | CD | HD3 | 59.1° | 72.6° |
OG1 | CG | CD | HD2 | 59.3° | 50.4° |