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DP6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3AC3sing1.53Å1.53Å
C3AH3A1sing1.10Å1.10Å
C3AH3A2sing1.09Å1.10Å
C3AH3A3sing1.10Å1.10Å
O1APAdoub1.50Å1.48Å
O2APAsing1.62Å1.49Å
O2AHO2Asing0.98Å0.95Å
O3AC3sing1.43Å1.43Å
O3AHO3Asing0.97Å0.95Å
O1BPBdoub1.50Å1.48Å
O2BPBsing1.62Å1.60Å
O2BHO2Bsing0.98Å0.95Å
O3BPBsing1.62Å1.61Å
O3BHO3Bsing0.98Å0.95Å
PBO6sing1.62Å1.61Å
O6PAsing1.62Å1.61Å
PAO5sing1.62Å1.61Å
O5C5sing1.42Å1.43Å
C5C4sing1.52Å1.53Å
C5H51sing1.09Å1.10Å
C5H52sing1.09Å1.10Å
C4C3sing1.54Å1.53Å
C4H41sing1.10Å1.10Å
C4H42sing1.10Å1.10Å
C3C2sing1.54Å1.54Å
C2C1sing1.51Å1.53Å
C2H21sing1.10Å1.10Å
C2H22sing1.10Å1.10Å
C1O1doub1.22Å1.23Å
C1O2sing1.36Å1.23Å
O2HO2sing0.98Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C3AH3A1109.5°110.7°
C3C3AH3A2109.5°112.1°
C3C3AH3A3109.5°110.9°
C3AC3O3A109.1°106.7°
C3AC3C4108.6°111.4°
C3AC3C2110.2°109.2°
H3A1C3AH3A2109.5°108.2°
H3A1C3AH3A3109.4°106.3°
H3A2C3AH3A3109.5°108.5°
O1APAO2A117.9°114.3°
O1APAO6110.0°114.2°
O1APAO5110.2°114.6°
PAO2AHO2A109.5°118.9°
O2APAO6108.0°103.3°
O2APAO5108.9°104.6°
C3O3AHO3A109.5°106.1°
O3AC3C4108.2°107.6°
O3AC3C2109.8°107.6°
O1BPBO2B112.4°115.3°
O1BPBO3B113.4°115.3°
O1BPBO6113.0°114.6°
PBO2BHO2B109.5°118.9°
O2BPBO3B106.5°103.6°
O2BPBO6104.7°103.1°
PBO3BHO3B109.5°119.0°
O3BPBO6106.1°103.4°
PBO6PA122.5°131.0°
O6PAO5100.5°104.6°
PAO5C5121.0°119.8°
O5C5C4108.4°108.6°
O5C5H51109.8°108.0°
O5C5H52110.0°108.0°
C4C5H51109.8°111.3°
C4C5H52110.1°111.6°
C5C4C3113.9°115.6°
C5C4H41108.0°108.8°
C5C4H42107.0°109.3°
H51C5H52108.7°109.1°
C3C4H41108.0°109.4°
C3C4H42107.0°109.9°
C4C3C2110.8°114.0°
H41C4H42113.0°103.1°
C3C2C1115.2°113.8°
C3C2H21107.6°110.9°
C3C2H22106.3°110.9°
C1C2H21107.6°107.4°
C1C2H22106.3°107.3°
C2C1O1120.9°124.0°
C2C1O2120.5°112.7°
H21C2H22114.0°106.0°
O1C1O2118.6°123.3°
C1O2HO2109.5°114.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C3AH3A1H3A2120.0°123.2°
C3C3AH3A1H3A3120.0°120.5°
C3C3AH3A2H3A3120.0°122.8°
C3AC3O3AC4118.0°119.7°
C3AC3O3AC2120.9°117.1°
C3AC3O3AHO3A37.9°13.5°
C3AC3C4C583.1°56.9°
C3AC3C4C2121.2°124.1°
C3AC3C4H4136.9°180.0°
C3AC3C4H42158.8°67.4°
C3AC3C2C1169.4°180.0°
C3AC3C2H2149.4°58.7°
C3AC3C2H2273.2°58.8°
H3A1C3AH3A2H3A3120.0°115.0°
H3A1C3AC3O3A146.1°177.6°
H3A1C3AC3C496.2°65.2°
H3A1C3AC3C225.4°61.6°
H3A2C3AC3O3A93.9°56.7°
H3A2C3AC3C423.9°174.0°
H3A2C3AC3C2145.4°59.3°
H3A3C3AC3O3A26.1°64.6°
H3A3C3AC3C4143.9°52.6°
H3A3C3AC3C294.5°179.3°
O1APAO2AO6125.3°124.7°
O1APAO2AO5126.4°126.1°
O1APAO2AHO2A42.8°46.0°
O1APAO6PB54.6°60.0°
O1APAO6O5116.1°126.1°
O1APAO5C544.5°180.0°
O2APAO6PB75.3°175.3°
O2APAO6O5114.0°109.2°
O2APAO5C5175.3°54.0°
HO2AO2APAO682.5°170.6°
HO2AO2APAO5169.2°80.1°
O3AC3C4C5158.5°173.6°
O3AC3C4C2120.5°119.2°
O3AC3C4H4181.5°63.3°
O3AC3C4H4240.5°49.3°
O3AC3C2C149.2°64.5°
O3AC3C2H2170.8°56.8°
O3AC3C2H22166.6°174.3°
HO3AO3AC3C480.1°133.1°
HO3AO3AC3C2158.8°103.6°
O1BPBO2BO3B124.8°126.8°
O1BPBO2BO6123.1°125.7°
O1BPBO2BHO2B146.6°48.4°
O1BPBO3BO6124.6°125.9°
O1BPBO3BHO3B32.8°48.9°
O1BPBO6PA20.5°60.0°
O2BPBO3BO6111.2°107.3°
O2BPBO3BHO3B91.4°77.9°
O2BPBO6PA143.1°173.9°
HO2BO2BPBO3B88.6°78.4°
HO2BO2BPBO623.6°174.1°
O3BPBO6PA104.4°66.3°
HO3BO3BPBO6157.4°174.8°
PBO6PAO5170.7°66.1°
O6PAO5C571.4°54.2°
PAO5C5C4162.3°180.0°
PAO5C5H5142.3°59.1°
PAO5C5H5277.3°58.8°
O5C5C4H51120.0°118.8°
O5C5C4H52120.4°119.0°
O5C5H51H52120.4°117.2°
O5C5C4C3179.8°178.8°
O5C5C4H4160.1°55.4°
O5C5C4H4261.8°56.5°
C4C5H51H52120.4°123.6°
C5C4C3H41120.0°123.1°
C5C4C3H42118.0°124.3°
C5C4H41H42118.2°116.0°
C5C4C3C238.1°67.2°
H51C5C4C359.9°60.0°
H51C5C4H41179.9°63.4°
H51C5C4H4258.2°175.4°
H52C5C4C359.8°62.2°
H52C5C4H4160.2°174.3°
H52C5C4H42177.8°62.4°
C3C4H41H42118.2°116.9°
C4C3C2C170.3°54.7°
C4C3C2H21169.6°176.0°
C4C3C2H2247.1°66.4°
H41C4C3C2158.1°55.9°
H42C4C3C280.0°168.5°
C3C2C1H21120.0°123.2°
C3C2C1H22117.4°123.1°
C3C2H21H22117.7°120.5°
C3C2C1O1139.8°63.3°
C3C2C1O241.4°116.8°
C1C2H21H22117.7°114.5°
C2C1O1O2178.9°180.0°
C2C1O2HO2178.8°180.0°
H21C2C1O1100.2°59.9°
H21C2C1O278.6°120.0°
H22C2C1O122.3°173.6°
H22C2C1O2158.8°6.4°
O1C1O2HO20.0°0.0°

223166

PDB entries from 2024-07-31

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