DP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| C3' | C4' | sing | 1.55Å | 1.54Å | |
| C2' | C1' | sing | 1.54Å | 1.52Å | |
| OP1 | P | doub | 1.48Å | 1.48Å | |
| OP2 | P | sing | 1.61Å | 1.48Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| O5' | P | sing | 1.61Å | 1.60Å | |
| C4' | C5' | sing | 1.53Å | 1.54Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C1' | O4' | sing | 1.44Å | 1.41Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| N9 | C8 | sing | 1.38Å | 1.40Å | |
| N9 | C4 | sing | 1.36Å | 1.39Å | |
| N3 | C4 | doub | 1.33Å | 1.36Å | |
| N3 | C2 | sing | 1.33Å | 1.31Å | |
| C8 | C7 | doub | 1.33Å | 1.38Å | |
| C4 | N5 | sing | 1.36Å | 1.40Å | |
| N2 | C2 | sing | 1.38Å | 1.33Å | |
| C2 | N1 | doub | 1.33Å | 1.37Å | |
| C7 | N5 | sing | 1.38Å | 1.39Å | |
| N5 | C6 | sing | 1.35Å | 1.39Å | |
| N1 | C6 | sing | 1.33Å | 1.37Å | |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| P | OP3 | sing | 1.61Å | 1.62Å | |
| OP2 | H1 | sing | 0.97Å | 0.95Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C7 | H7 | sing | 1.08Å | 1.08Å | |
| N2 | H22 | sing | 0.97Å | 1.00Å | |
| N2 | H21 | sing | 0.97Å | 1.00Å | |
| C2' | H2'' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | H3 | sing | 0.97Å | 0.95Å | |
| OP3 | H4 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C2' | 111.3° | 110.9° |
| O3' | C3' | C4' | 111.7° | 110.9° |
| O3' | C3' | H3' | 111.5° | 110.9° |
| C3' | O3' | H3 | 109.5° | 114.0° |
| C2' | C3' | C4' | 101.8° | 102.1° |
| C3' | C2' | C1' | 102.2° | 104.2° |
| C3' | C2' | H2'' | 111.2° | 110.5° |
| C3' | C2' | H2' | 111.2° | 110.6° |
| C2' | C3' | H3' | 110.2° | 110.9° |
| C3' | C4' | C5' | 113.7° | 110.6° |
| C3' | C4' | O4' | 108.8° | 103.5° |
| C3' | C4' | H4' | 107.9° | 110.7° |
| C4' | C3' | H3' | 109.9° | 110.9° |
| C2' | C1' | O4' | 106.5° | 107.3° |
| C2' | C1' | N9 | 111.1° | 109.9° |
| C2' | C1' | H1' | 108.6° | 110.0° |
| C1' | C2' | H2'' | 111.3° | 110.5° |
| C1' | C2' | H2' | 111.3° | 110.4° |
| OP1 | P | OP2 | 119.0° | 109.4° |
| OP1 | P | O5' | 108.9° | 109.5° |
| OP1 | P | OP3 | 108.5° | 109.5° |
| OP2 | P | O5' | 107.6° | 109.5° |
| OP2 | P | OP3 | 109.8° | 109.5° |
| P | OP2 | H1 | 109.5° | 114.0° |
| C5' | O5' | P | 119.5° | 123.0° |
| O5' | C5' | C4' | 112.8° | 109.5° |
| O5' | C5' | H5'' | 108.6° | 109.4° |
| O5' | C5' | H5' | 108.6° | 109.5° |
| O5' | P | OP3 | 101.7° | 109.5° |
| C5' | C4' | O4' | 109.1° | 110.7° |
| C4' | C5' | H5'' | 108.6° | 109.4° |
| C4' | C5' | H5' | 108.7° | 109.5° |
| C5' | C4' | H4' | 107.9° | 110.5° |
| C4' | O4' | C1' | 108.2° | 107.0° |
| O4' | C4' | H4' | 109.4° | 110.6° |
| O4' | C1' | N9 | 111.2° | 109.8° |
| O4' | C1' | H1' | 110.1° | 109.9° |
| C1' | N9 | C8 | 123.3° | 126.1° |
| C1' | N9 | C4 | 128.8° | 126.0° |
| N9 | C1' | H1' | 109.2° | 109.9° |
| C8 | N9 | C4 | 107.2° | 107.9° |
| N9 | C8 | C7 | 109.1° | 108.4° |
| N9 | C8 | H8 | 125.5° | 125.8° |
| N9 | C4 | N3 | 125.6° | 132.6° |
| N9 | C4 | N5 | 108.0° | 107.6° |
| C4 | N3 | C2 | 112.4° | 120.1° |
| N3 | C4 | N5 | 126.4° | 119.8° |
| N3 | C2 | N2 | 118.8° | 119.7° |
| N3 | C2 | N1 | 127.7° | 120.7° |
| C8 | C7 | N5 | 107.3° | 108.2° |
| C7 | C8 | H8 | 125.5° | 125.8° |
| C8 | C7 | H7 | 126.3° | 125.9° |
| C4 | N5 | C7 | 108.4° | 107.9° |
| C4 | N5 | C6 | 116.6° | 119.4° |
| N2 | C2 | N1 | 113.5° | 119.6° |
| C2 | N2 | H22 | 120.0° | 120.1° |
| C2 | N2 | H21 | 120.0° | 120.0° |
| C2 | N1 | C6 | 118.1° | 120.4° |
| C7 | N5 | C6 | 134.8° | 132.7° |
| N5 | C7 | H7 | 126.3° | 125.9° |
| N5 | C6 | N1 | 118.8° | 119.6° |
| N5 | C6 | O6 | 122.7° | 120.2° |
| N1 | C6 | O6 | 118.5° | 120.2° |
| P | OP3 | H4 | 109.5° | 114.1° |
| H5'' | C5' | H5' | 109.5° | 109.5° |
| H22 | N2 | H21 | 120.0° | 120.0° |
| H2'' | C2' | H2' | 109.5° | 110.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C2' | C4' | 119.2° | 118.2° |
| O3' | C3' | C2' | H3' | 124.2° | 123.6° |
| O3' | C3' | C4' | H3' | 124.4° | 123.6° |
| O3' | C3' | C2' | C1' | 88.4° | 139.1° |
| O3' | C3' | C4' | C5' | 136.7° | 86.2° |
| O3' | C3' | C4' | O4' | 101.6° | 155.2° |
| O3' | C3' | C4' | H4' | 17.1° | 36.6° |
| O3' | C3' | C2' | H2'' | 152.8° | 20.4° |
| O3' | C3' | C2' | H2' | 30.4° | 102.3° |
| C2' | C3' | C4' | H3' | 116.8° | 118.2° |
| C3' | C2' | C1' | H2'' | 118.8° | 118.7° |
| C3' | C2' | C1' | H2' | 118.8° | 118.8° |
| C2' | C3' | C4' | C5' | 104.5° | 155.6° |
| C2' | C3' | C4' | O4' | 17.3° | 37.0° |
| C3' | C2' | C1' | O4' | 35.8° | 2.0° |
| C3' | C2' | C1' | N9 | 157.1° | 121.4° |
| C2' | C3' | C4' | H4' | 135.9° | 81.5° |
| C3' | C2' | C1' | H1' | 82.8° | 117.5° |
| C3' | C2' | H2'' | H2' | 123.4° | 122.7° |
| C2' | C3' | O3' | H3 | 180.0° | 61.5° |
| C4' | C3' | C2' | C1' | 30.8° | 20.9° |
| C3' | C4' | C5' | O5' | 59.0° | 179.5° |
| C3' | C4' | C5' | O4' | 121.6° | 114.1° |
| C3' | C4' | C5' | H4' | 119.6° | 123.0° |
| C3' | C4' | O4' | H4' | 117.6° | 118.7° |
| C3' | C4' | O4' | C1' | 4.9° | 40.0° |
| C3' | C4' | C5' | H5'' | 61.5° | 60.6° |
| C3' | C4' | C5' | H5' | 179.5° | 59.4° |
| C4' | C3' | C2' | H2'' | 88.0° | 97.8° |
| C4' | C3' | C2' | H2' | 149.6° | 139.5° |
| C4' | C3' | O3' | H3 | 66.9° | 174.2° |
| C2' | C1' | O4' | C4' | 25.5° | 26.5° |
| C2' | C1' | O4' | N9 | 121.2° | 119.4° |
| C2' | C1' | O4' | H1' | 117.6° | 119.6° |
| C2' | C1' | N9 | H1' | 119.8° | 121.2° |
| C2' | C1' | N9 | C8 | 62.9° | 64.2° |
| C2' | C1' | N9 | C4 | 107.1° | 115.5° |
| C1' | C2' | H2'' | H2' | 123.4° | 122.5° |
| C1' | C2' | C3' | H3' | 147.4° | 97.3° |
| OP1 | P | OP2 | O5' | 124.3° | 120.0° |
| OP1 | P | OP2 | OP3 | 125.8° | 120.0° |
| OP1 | P | O5' | C5' | 45.1° | 54.9° |
| OP1 | P | O5' | OP3 | 114.4° | 120.0° |
| OP1 | P | OP2 | H1 | 0.0° | 180.0° |
| OP1 | P | OP3 | H4 | 0.0° | 60.0° |
| OP2 | P | O5' | C5' | 175.3° | 65.1° |
| OP2 | P | O5' | OP3 | 115.4° | 120.0° |
| OP2 | P | OP3 | H4 | 131.6° | 60.0° |
| O5' | C5' | C4' | H5'' | 120.5° | 119.9° |
| O5' | C5' | C4' | H5' | 120.5° | 120.1° |
| O5' | C5' | C4' | O4' | 62.6° | 66.4° |
| C5' | O5' | P | OP3 | 69.3° | 174.9° |
| O5' | C5' | H5'' | H5' | 118.5° | 120.0° |
| O5' | C5' | C4' | H4' | 178.6° | 56.5° |
| P | O5' | C5' | C4' | 167.7° | 180.0° |
| O5' | P | OP2 | H1 | 124.3° | 60.0° |
| P | O5' | C5' | H5'' | 71.8° | 60.1° |
| P | O5' | C5' | H5' | 47.2° | 59.9° |
| O5' | P | OP3 | H4 | 114.7° | 180.0° |
| C5' | C4' | O4' | H4' | 117.9° | 122.8° |
| C5' | C4' | O4' | C1' | 129.4° | 158.6° |
| C4' | C5' | H5'' | H5' | 118.5° | 120.0° |
| C5' | C4' | C3' | H3' | 12.3° | 37.4° |
| C4' | O4' | C1' | N9 | 146.7° | 145.9° |
| O4' | C4' | C5' | H5'' | 176.9° | 53.5° |
| O4' | C4' | C5' | H5' | 57.9° | 173.5° |
| C4' | O4' | C1' | H1' | 92.1° | 93.1° |
| O4' | C4' | C3' | H3' | 134.0° | 81.2° |
| O4' | C1' | N9 | H1' | 121.8° | 121.0° |
| O4' | C1' | N9 | C8 | 55.6° | 53.6° |
| O4' | C1' | N9 | C4 | 134.5° | 126.7° |
| C1' | O4' | C4' | H4' | 112.7° | 78.6° |
| O4' | C1' | C2' | H2'' | 83.0° | 120.8° |
| O4' | C1' | C2' | H2' | 154.6° | 116.8° |
| C1' | N9 | C8 | C4 | 171.8° | 179.7° |
| C1' | N9 | C4 | N3 | 4.0° | 0.8° |
| C1' | N9 | C8 | C7 | 173.4° | 180.0° |
| C1' | N9 | C4 | N5 | 173.6° | 179.8° |
| C1' | N9 | C8 | H8 | 6.6° | 0.0° |
| N9 | C1' | C2' | H2'' | 38.3° | 119.9° |
| N9 | C1' | C2' | H2' | 84.1° | 2.6° |
| C8 | N9 | C4 | N3 | 175.2° | 179.5° |
| N9 | C8 | C7 | H8 | 180.0° | 180.0° |
| C8 | N9 | C4 | N5 | 2.4° | 0.4° |
| N9 | C8 | C7 | N5 | 0.1° | 0.0° |
| C8 | N9 | C1' | H1' | 177.4° | 174.6° |
| N9 | C8 | C7 | H7 | 179.9° | 180.0° |
| N9 | C4 | N3 | N5 | 177.2° | 178.9° |
| N9 | C4 | N3 | C2 | 176.5° | 179.6° |
| C4 | N9 | C8 | C7 | 1.6° | 0.3° |
| N9 | C4 | N5 | C7 | 2.4° | 0.4° |
| N9 | C4 | N5 | C6 | 178.1° | 179.8° |
| C4 | N9 | C1' | H1' | 12.7° | 5.7° |
| C4 | N9 | C8 | H8 | 178.4° | 179.7° |
| C4 | N3 | C2 | N2 | 180.0° | 179.7° |
| C4 | N3 | C2 | N1 | 0.9° | 0.4° |
| N3 | C4 | N5 | C7 | 175.2° | 179.6° |
| N3 | C4 | N5 | C6 | 0.5° | 0.7° |
| C2 | N3 | C4 | N5 | 0.7° | 0.7° |
| N3 | C2 | N2 | N1 | 179.2° | 179.9° |
| N3 | C2 | N1 | C6 | 0.2° | 0.1° |
| N3 | C2 | N2 | H22 | 0.0° | 180.0° |
| N3 | C2 | N2 | H21 | 180.0° | 0.1° |
| C8 | C7 | N5 | C4 | 1.4° | 0.3° |
| C8 | C7 | N5 | H7 | 180.0° | 180.0° |
| C8 | C7 | N5 | C6 | 176.0° | 180.0° |
| C4 | N5 | C7 | C6 | 174.5° | 179.7° |
| C4 | N5 | C6 | N1 | 1.6° | 0.3° |
| C4 | N5 | C6 | O6 | 177.8° | 179.7° |
| C4 | N5 | C7 | H7 | 178.6° | 179.7° |
| N2 | C2 | N1 | C6 | 178.9° | 180.0° |
| C2 | N2 | H22 | H21 | 180.0° | 179.9° |
| C2 | N1 | C6 | N5 | 1.5° | 0.0° |
| C2 | N1 | C6 | O6 | 177.9° | 180.0° |
| N1 | C2 | N2 | H22 | 179.2° | 0.1° |
| N1 | C2 | N2 | H21 | 0.8° | 180.0° |
| C7 | N5 | C6 | N1 | 172.6° | 180.0° |
| C7 | N5 | C6 | O6 | 8.0° | 0.1° |
| N5 | C7 | C8 | H8 | 179.9° | 180.0° |
| N5 | C6 | N1 | O6 | 179.4° | 180.0° |
| C6 | N5 | C7 | H7 | 4.1° | 0.1° |
| OP3 | P | OP2 | H1 | 125.8° | 60.0° |
| H5'' | C5' | C4' | H4' | 58.1° | 176.4° |
| H5' | C5' | C4' | H4' | 60.9° | 63.6° |
| H4' | C4' | C3' | H3' | 107.3° | 160.3° |
| H1' | C1' | C2' | H2'' | 158.4° | 1.3° |
| H1' | C1' | C2' | H2' | 36.0° | 123.8° |
| H8 | C8 | C7 | H7 | 0.1° | 0.0° |
| H2'' | C2' | C3' | H3' | 28.5° | 144.0° |
| H2' | C2' | C3' | H3' | 93.8° | 21.4° |
| H3' | C3' | O3' | H3 | 56.6° | 62.2° |
