Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DOE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.55Å1.54Å
C1C17sing1.54Å1.60Å
C1N1sing1.48Å1.50Å
C1HC1sing1.10Å1.11Å
C2N2sing1.48Å1.52Å
C2HC21sing1.10Å1.11Å
C2HC22sing1.09Å1.11Å
C3C4sing1.55Å1.53Å
C3N2sing1.48Å1.46Å
C3HC31sing1.10Å1.12Å
C3HC32sing1.10Å1.11Å
C4N3sing1.47Å1.54Å
C4HC41sing1.09Å1.12Å
C4HC42sing1.10Å1.12Å
C5C6sing1.55Å1.51Å
C5N3sing1.47Å1.51Å
C5HC51sing1.09Å1.11Å
C5HC52sing1.10Å1.12Å
C6N4sing1.47Å1.51Å
C6HC61sing1.10Å1.11Å
C6HC62sing1.10Å1.11Å
C7C8sing1.54Å1.54Å
C7N4sing1.47Å1.48Å
C7HC71sing1.09Å1.11Å
C7HC72sing1.10Å1.12Å
C8N1sing1.47Å1.51Å
C8HC81sing1.10Å1.11Å
C8HC82sing1.10Å1.11Å
C9C10sing1.50Å1.56Å
C9N1sing1.46Å1.52Å
C9HC91sing1.09Å1.11Å
C9HC92sing1.09Å1.11Å
C10O1doub1.22Å1.29Å
C10O2sing1.36Å1.25Å
C11C12sing1.50Å1.52Å
C11N2sing1.47Å1.51Å
C11H111sing1.09Å1.11Å
C11H112sing1.09Å1.12Å
C12O3doub1.22Å1.29Å
C12O4sing1.36Å1.27Å
C13C14sing1.50Å1.50Å
C13N3sing1.46Å1.51Å
C13H131sing1.09Å1.11Å
C13H132sing1.09Å1.12Å
C14O5doub1.22Å1.25Å
C14O6sing1.36Å1.29Å
C15C16sing1.50Å1.53Å
C15N4sing1.47Å1.52Å
C15H151sing1.09Å1.11Å
C15H152sing1.09Å1.11Å
C16O7doub1.22Å1.24Å
C16O8sing1.36Å1.26Å
C17C18sing1.50Å1.53Å
C17H171sing1.09Å1.12Å
C17H172sing1.09Å1.12Å
C18C19doub1.39Å1.42ÅAromatic
C18C23sing1.39Å1.44ÅAromatic
C19C20sing1.39Å1.42ÅAromatic
C19H19sing1.09Å1.10Å
C20C21doub1.39Å1.44ÅAromatic
C20H20sing1.09Å1.10Å
C21C22sing1.40Å1.43ÅAromatic
C21N5sing1.40Å1.37Å
C22C23doub1.39Å1.42ÅAromatic
C22H22sing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C24C25sing1.51Å1.52Å
C24N5sing1.40Å1.37Å
C24O9doub1.23Å1.24Å
C25S1sing1.81Å1.83Å
C25H251sing1.09Å1.12Å
C25H252sing1.09Å1.11Å
C26C27sing1.52Å1.54Å
C26S1sing1.81Å1.82Å
C26H261sing1.09Å1.12Å
C26H262sing1.09Å1.11Å
C27O10sing1.42Å1.42Å
C27H271sing1.10Å1.11Å
C27H272sing1.10Å1.12Å
N5HN5sing1.03Å1.02Å
O10H10sing0.97Å0.95Å
HO1O4sing0.98Å0.95Å
HO2O2sing0.98Å0.95Å
HO3O8sing0.98Å0.95Å
HO4O6sing0.98Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C17109.3°110.0°
C2C1N1111.7°116.4°
C2C1HC1110.4°109.4°
C1C2N2117.9°111.3°
C1C2HC21109.2°107.7°
C1C2HC22109.2°112.5°
C17C1N1115.4°108.4°
C17C1HC1106.2°103.7°
C1C17C18113.1°111.3°
C1C17H171110.9°109.0°
C1C17H172110.9°108.9°
N1C1HC1103.6°108.2°
C1N1C8112.1°113.7°
C1N1C9107.5°116.2°
N2C2HC21109.2°110.3°
N2C2HC22109.2°110.5°
C2N2C3110.9°111.2°
C2N2C11108.7°109.9°
HC21C2HC22100.9°104.2°
C4C3N2114.5°113.4°
C4C3HC31110.4°111.8°
C4C3HC32110.4°107.0°
C3C4N3118.3°116.8°
C3C4HC41109.0°111.3°
C3C4HC42109.0°107.8°
N2C3HC31110.4°109.8°
N2C3HC32110.4°108.6°
C3N2C11108.3°109.2°
HC31C3HC3299.9°105.9°
N3C4HC41109.0°108.1°
N3C4HC42109.0°108.0°
C4N3C5108.9°113.5°
C4N3C13110.8°111.7°
HC41C4HC42101.0°104.1°
C6C5N3115.1°114.0°
C6C5HC51110.2°111.3°
C6C5HC52110.1°105.1°
C5C6N4114.5°117.3°
C5C6HC61110.4°106.7°
C5C6HC62110.4°108.3°
N3C5HC51110.1°112.3°
N3C5HC52110.2°108.6°
C5N3C13108.3°111.4°
HC51C5HC52100.1°104.8°
N4C6HC61110.4°108.1°
N4C6HC62110.4°109.7°
C6N4C7105.2°112.8°
C6N4C15110.5°110.0°
HC61C6HC6299.9°106.2°
C8C7N4113.6°111.3°
C8C7HC71110.7°109.3°
C8C7HC72110.7°110.2°
C7C8N1116.4°117.2°
C7C8HC81109.7°110.5°
C7C8HC82109.7°107.9°
N4C7HC71110.7°109.2°
N4C7HC72110.7°111.1°
C7N4C15109.2°110.9°
HC71C7HC7299.6°105.6°
N1C8HC81109.7°108.3°
N1C8HC82109.7°108.1°
C8N1C9110.8°113.8°
HC81C8HC82100.5°104.1°
C10C9N1112.7°108.6°
C10C9HC91111.0°109.7°
C10C9HC92111.0°109.9°
C9C10O1117.4°126.4°
C9C10O2118.4°109.9°
N1C9HC91111.0°108.9°
N1C9HC92111.0°109.1°
HC91C9HC9299.3°110.6°
O1C10O2124.2°123.7°
C10O2HO2109.5°111.8°
C12C11N2112.9°108.6°
C12C11H111110.9°109.6°
C12C11H112111.0°109.9°
C11C12O3114.0°126.5°
C11C12O4120.0°109.9°
N2C11H111111.0°109.0°
N2C11H112110.9°109.0°
H111C11H11299.4°110.6°
O3C12O4126.0°123.6°
C12O4HO1109.5°111.8°
C14C13N3115.5°108.6°
C14C13H131110.0°109.7°
C14C13H132110.0°109.9°
C13C14O5117.8°126.5°
C13C14O6117.9°109.9°
N3C13H131110.1°108.9°
N3C13H132110.0°109.0°
H131C13H132100.2°110.6°
O5C14O6124.3°123.6°
C14O6HO4109.5°111.9°
C16C15N4113.1°108.6°
C16C15H151110.9°109.6°
C16C15H152110.9°109.9°
C15C16O7119.9°126.5°
C15C16O8118.6°109.9°
N4C15H151110.9°109.0°
N4C15H152110.9°109.1°
H151C15H15299.4°110.6°
O7C16O8121.5°123.6°
C16O8HO3109.5°111.8°
C18C17H171110.9°110.4°
C18C17H172110.9°110.4°
C17C18C19122.6°119.7°
C17C18C23119.1°119.7°
H171C17H17299.4°106.7°
C19C18C23118.3°120.7°
C18C19C20120.0°119.7°
C18C19H19119.9°120.8°
C18C23C22121.5°119.7°
C18C23H23120.1°120.9°
C20C19H19120.2°119.5°
C19C20C21122.1°120.0°
C19C20H20118.5°119.4°
C21C20H20119.4°120.6°
C20C21C22117.7°120.0°
C20C21N5116.9°120.0°
C22C21N5125.4°120.0°
C21C22C23120.4°120.0°
C21C22H22120.2°120.6°
C21N5C24136.7°128.1°
C21N5HN5111.5°116.0°
C23C22H22119.4°119.4°
C22C23H23118.4°119.5°
C25C24N5114.3°112.7°
C25C24O9120.0°120.5°
C24C25S1111.1°108.8°
C24C25H251111.6°108.9°
C24C25H252111.6°111.8°
N5C24O9125.7°126.8°
C24N5HN5111.9°115.9°
S1C25H251111.6°109.9°
S1C25H252111.6°109.5°
C25S1C26102.8°98.6°
H251C25H25298.8°108.0°
C27C26S1109.4°111.4°
C27C26H261112.2°110.6°
C27C26H262112.2°110.2°
C26C27O10111.9°110.1°
C26C27H271111.3°112.1°
C26C27H272111.3°109.4°
S1C26H261112.2°107.7°
S1C26H262112.2°108.1°
H261C26H26298.2°108.8°
O10C27H271111.3°109.2°
O10C27H272111.3°107.7°
C27O10H10111.8°106.8°
H271C27H27299.1°108.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C17N1126.8°128.2°
C2C1C17HC1119.1°116.9°
C2C1N1HC1118.8°123.6°
C1C2N2HC21125.3°119.5°
C1C2N2HC22125.2°125.8°
C1C2HC21HC22114.9°119.7°
C1C2N2C3157.4°107.0°
C2C1N1C880.8°95.6°
C2C1N1C9157.3°39.4°
C1C2N2C1183.7°131.9°
C2C1C17C1856.6°157.0°
C2C1C17H17168.7°34.9°
C2C1C17H172178.1°81.1°
C17C1N1HC1115.6°111.8°
C17C1C2N2176.6°81.9°
C17C1C2HC2158.1°39.1°
C17C1C2HC2251.4°153.4°
C17C1N1C844.8°139.9°
C17C1N1C977.2°85.1°
C1C17C18H171125.3°121.2°
C1C17C18H172125.3°121.1°
C1C17H171H172116.8°117.5°
C1C17C18C19121.4°90.0°
C1C17C18C2358.4°89.9°
N1C1C2N254.5°154.4°
N1C1C2HC2170.7°84.6°
N1C1C2HC22179.8°29.7°
C1N1C8C7162.6°78.4°
C1N1C8C9120.1°136.1°
C1N1C8HC8137.3°47.3°
C1N1C8HC8272.1°159.5°
C1N1C9C10149.9°165.0°
C1N1C9HC9184.9°45.6°
C1N1C9HC9224.6°75.2°
N1C1C17C18176.7°74.8°
N1C1C17H17158.1°163.2°
N1C1C17H17251.4°47.1°
HC1C1C2N260.1°31.4°
HC1C1C2HC21174.6°152.4°
HC1C1C2HC2265.1°93.3°
HC1C1N1C8160.4°28.1°
HC1C1N1C938.5°163.1°
HC1C1C17C1862.6°40.0°
HC1C1C17H171172.2°82.0°
HC1C1C17H17262.7°161.9°
N2C2HC21HC22114.9°118.6°
C2N2C3C487.8°74.6°
C2N2C3C11119.2°121.5°
C2N2C3HC31147.0°51.3°
C2N2C3HC3237.5°166.7°
C2N2C11C1283.9°177.7°
C2N2C11H11141.3°62.9°
C2N2C11H112150.8°58.0°
HC21C2N2C332.1°133.5°
HC21C2N2C11151.0°12.4°
HC22C2N2C377.4°18.8°
HC22C2N2C1141.5°102.3°
C4C3N2HC31125.3°125.9°
C4C3N2HC32125.3°118.8°
C4C3HC31HC32116.2°116.1°
C3C4N3HC41125.2°126.3°
C3C4N3HC42125.3°121.6°
C3C4HC41HC42114.7°115.9°
C3C4N3C5156.8°72.3°
C4C3N2C11153.0°163.9°
C3C4N3C1384.2°54.6°
N2C3HC31HC32116.2°117.1°
N2C3C4N349.5°162.0°
N2C3C4HC4175.7°37.3°
N2C3C4HC42174.8°76.3°
C3N2C11C12155.5°60.0°
C3N2C11H11179.3°59.4°
C3N2C11H11230.2°179.8°
HC31C3C4N375.7°37.3°
HC31C3C4HC41159.0°87.5°
HC31C3C4HC4249.5°158.9°
HC31C3N2C1127.7°70.2°
HC32C3C4N3174.8°78.2°
HC32C3C4HC4149.5°157.0°
HC32C3C4HC4259.9°43.4°
HC32C3N2C1181.7°45.2°
N3C4HC41HC42114.8°114.6°
C4N3C5C681.7°92.6°
C4N3C5C13120.6°127.1°
C4N3C5HC51153.0°35.2°
C4N3C5HC5243.5°150.6°
C4N3C13C1486.2°171.9°
C4N3C13H13139.1°68.6°
C4N3C13H132148.6°52.1°
HC41C4N3C531.5°54.0°
HC41C4N3C13150.5°179.0°
HC42C4N3C577.9°166.1°
HC42C4N3C1341.1°66.9°
C6C5N3HC51125.3°127.8°
C6C5N3HC52125.2°116.8°
C6C5HC51HC52116.0°113.0°
C5C6N4HC61125.2°120.6°
C5C6N4HC62125.3°124.1°
C5C6HC61HC62116.3°115.4°
C5C6N4C7159.9°65.1°
C6C5N3C13157.7°140.3°
C5C6N4C1582.3°170.6°
N3C5HC51HC52116.0°117.8°
N3C5C6N453.6°59.9°
N3C5C6HC6171.7°61.4°
N3C5C6HC62178.8°175.3°
C5N3C13C14154.5°60.0°
C5N3C13H13180.3°59.5°
C5N3C13H13229.2°179.8°
HC51C5C6N471.7°68.4°
HC51C5C6HC61163.1°170.3°
HC51C5C6HC6253.5°56.4°
HC51C5N3C1332.4°91.9°
HC52C5C6N4178.8°178.8°
HC52C5C6HC6153.5°57.4°
HC52C5C6HC6256.0°56.5°
HC52C5N3C1377.1°23.5°
N4C6HC61HC62116.2°117.6°
C6N4C7C886.0°162.8°
C6N4C7C15118.7°123.9°
C6N4C7HC71148.8°42.1°
C6N4C7HC7239.3°73.9°
C6N4C15C1688.8°60.0°
C6N4C15H15136.4°179.4°
C6N4C15H152145.9°59.7°
HC61C6N4C734.7°174.3°
HC61C6N4C15152.4°49.9°
HC62C6N4C774.8°58.9°
HC62C6N4C1543.0°65.4°
C8C7N4HC71125.3°120.8°
C8C7N4HC72125.2°123.2°
C8C7HC71HC72116.5°118.4°
C7C8N1HC81125.2°125.7°
C7C8N1HC82125.3°122.1°
C7C8HC81HC82115.5°115.6°
C7C8N1C977.3°57.7°
C8C7N4C15155.4°73.3°
N4C7HC71HC72116.6°119.5°
N4C7C8N150.8°144.1°
N4C7C8HC8174.4°19.5°
N4C7C8HC82176.1°93.7°
C7N4C15C16155.9°174.5°
C7N4C15H15178.8°55.2°
C7N4C15H15230.6°65.7°
HC71C7C8N174.4°23.4°
HC71C7C8HC81160.3°101.2°
HC71C7C8HC8250.9°145.6°
HC71C7N4C1530.1°166.0°
HC72C7C8N1176.1°92.1°
HC72C7C8HC8150.9°143.2°
HC72C7C8HC8258.6°30.0°
HC72C7N4C1579.4°49.9°
N1C8HC81HC82115.5°114.8°
C8N1C9C1087.4°60.0°
C8N1C9HC9137.9°179.4°
C8N1C9HC92147.4°59.8°
HC81C8N1C9157.4°176.6°
HC82C8N1C948.0°64.4°
C10C9N1HC91125.2°119.4°
C10C9N1HC92125.3°119.8°
C10C9HC91HC92116.9°121.3°
C9C10O1O2179.9°180.0°
C9C10O2HO2179.9°180.0°
N1C9HC91HC92116.9°119.9°
N1C9C10O133.0°29.0°
N1C9C10O2146.9°151.0°
HC91C9C10O1158.2°90.0°
HC91C9C10O221.7°90.0°
HC92C9C10O192.3°148.2°
HC92C9C10O287.8°31.7°
O1C10O2HO20.0°0.0°
C12C11N2H111125.3°119.4°
C12C11N2H112125.3°119.8°
C12C11H111H112116.8°121.3°
C11C12O3O4178.7°179.9°
C11C12O4HO1178.6°180.0°
N2C11H111H112116.8°119.9°
N2C11C12O319.4°31.0°
N2C11C12O4159.4°149.1°
H111C11C12O3144.6°150.0°
H111C11C12O434.1°30.1°
H112C11C12O3105.9°88.2°
H112C11C12O475.3°91.7°
O3C12O4HO10.0°0.1°
C14C13N3H131125.3°119.4°
C14C13N3H132125.3°119.8°
C14C13H131H132115.8°121.4°
C13C14O5O6178.9°179.9°
C13C14O6HO4178.9°180.0°
N3C13H131H132115.9°119.8°
N3C13C14O520.9°31.0°
N3C13C14O6158.1°149.1°
H131C13C14O5146.2°150.0°
H131C13C14O632.8°30.1°
H132C13C14O5104.4°88.2°
H132C13C14O676.6°91.7°
O5C14O6HO40.0°0.1°
C16C15N4H151125.2°119.4°
C16C15N4H152125.3°119.7°
C16C15H151H152116.7°121.3°
C15C16O7O8179.2°180.0°
C15C16O8HO3179.2°180.0°
N4C15H151H152116.8°120.0°
N4C15C16O718.6°29.0°
N4C15C16O8160.6°151.0°
H151C15C16O7143.9°90.0°
H151C15C16O835.4°90.0°
H152C15C16O7106.7°148.3°
H152C15C16O874.1°31.8°
O7C16O8HO30.0°0.0°
C18C17H171H172116.8°120.0°
C17C18C19C23179.7°179.9°
C17C18C19C20179.6°180.0°
C17C18C19H190.5°0.1°
C17C18C23C22179.5°180.0°
C17C18C23H230.5°0.0°
H171C17C18C193.9°31.2°
H171C17C18C23176.4°148.9°
H172C17C18C19113.4°149.0°
H172C17C18C2366.9°31.1°
C18C19C20H19180.0°179.9°
C18C19C20C210.1°0.1°
C18C19C20H20179.9°180.0°
C19C18C23C220.3°0.1°
C19C18C23H23179.7°179.9°
C23C18C19C200.2°0.1°
C23C18C19H19179.8°180.0°
C18C23C22C210.2°0.1°
C18C23C22H23180.0°180.0°
C18C23C22H22179.8°180.0°
C19C20C21H20180.0°180.0°
C19C20C21C220.2°0.1°
C19C20C21N5179.5°179.9°
H19C19C20C21180.0°180.0°
H19C19C20H200.1°0.1°
C20C21C22N5179.7°180.0°
C20C21C22C230.0°0.1°
C20C21C22H22180.0°180.0°
C20C21N5C24179.4°180.0°
C20C21N5HN50.5°0.0°
H20C20C21C22179.8°180.0°
H20C20C21N50.5°0.0°
C21C22C23H22180.0°179.9°
C21C22C23H23179.8°180.0°
C22C21N5C240.2°0.0°
C22C21N5HN5179.8°180.0°
N5C21C22C23179.6°179.9°
N5C21C22H220.4°0.0°
C21N5C24C25169.2°180.0°
C21N5C24HN5180.0°180.0°
C21N5C24O911.0°0.9°
H22C22C23H230.2°0.0°
C25C24N5O9179.8°179.1°
C24C25S1H251125.3°119.1°
C24C25S1H252125.3°122.5°
C24C25H251H252117.5°121.6°
C24C25S1C26178.7°180.0°
C25C24N5HN510.8°0.0°
N5C24C25S13.5°90.3°
N5C24C25H251121.7°149.9°
N5C24C25H252128.8°30.7°
O9C24C25S1176.7°88.8°
O9C24C25H25158.1°30.9°
O9C24C25H25251.4°150.1°
O9C24N5HN5169.0°179.1°
S1C25H251H252117.5°119.3°
C25S1C26C27178.9°178.6°
C25S1C26H26155.8°60.0°
C25S1C26H26253.7°57.4°
H251C25S1C2653.4°60.9°
H252C25S1C2656.1°57.5°
C27C26S1H261125.3°121.5°
C27C26S1H262125.3°121.2°
C27C26H261H262118.1°121.1°
C26C27O10H271125.3°123.5°
C26C27O10H272125.2°119.2°
C26C27H271H272117.2°120.8°
C26C27O10H10180.0°61.9°
S1C26H261H262118.1°116.9°
S1C26C27O10179.3°59.8°
S1C26C27H27155.4°62.0°
S1C26C27H27254.1°177.9°
H261C26C27O1055.4°60.0°
H261C26C27H27169.9°178.2°
H261C26C27H272179.4°58.2°
H262C26C27O1054.1°179.7°
H262C26C27H271179.3°57.9°
H262C26C27H27271.2°62.1°
O10C27H271H272117.2°116.9°
H271C27O10H1054.7°61.6°
H272C27O10H1054.8°178.9°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon