DO8

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1B	sing	1.34Å	1.25Å
C1	O1A	doub	1.21Å	1.28Å
C1	C2	sing	1.51Å	1.52Å
O1B	HO1B	sing	0.97Å	0.95Å
C2	C3	sing	1.53Å	1.58Å
C2	O6	sing	1.43Å	1.50Å
C2	O2	sing	1.43Å	1.52Å
C3	C4	sing	1.53Å	1.53Å
C3	H31	sing	1.09Å	1.11Å
C3	H32	sing	1.09Å	1.12Å
C4	O4	sing	1.43Å	1.46Å
C4	C5	sing	1.53Å	1.53Å
C4	H4	sing	1.09Å	1.11Å
O4	HO4	sing	0.97Å	0.95Å
C5	O5	sing	1.43Å	1.45Å
C5	C6	sing	1.53Å	1.60Å
C5	H5	sing	1.09Å	1.12Å
O5	HO5	sing	0.97Å	0.95Å
C6	O6	sing	1.43Å	1.50Å
C6	C7	sing	1.53Å	1.65Å
C6	H6	sing	1.09Å	1.11Å
C7	O7	sing	1.43Å	1.47Å
C7	C8	sing	1.53Å	1.59Å
C7	H7	sing	1.09Å	1.11Å
O7	HO7	sing	0.97Å	0.95Å
C8	O8	sing	1.43Å	1.51Å
C8	H81	sing	1.09Å	1.11Å
C8	H82	sing	1.09Å	1.11Å
P1	O2P	sing	1.61Å	1.71Å
P1	O3P	sing	1.61Å	1.68Å
P1	O8	sing	1.61Å	1.75Å
P1	O1P	doub	1.48Å	1.68Å
O2P	HOP2	sing	0.97Å	0.95Å
O3P	HOP3	sing	0.97Å	0.95Å
O2	HO2	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1B	C1	O1A	118.7°	120.0°
O1B	C1	C2	118.5°	120.0°
C1	O1B	HO1B	118.7°	120.0°
O1A	C1	C2	122.8°	120.0°
C1	C2	C3	107.7°	109.3°
C1	C2	O6	105.1°	109.4°
C1	C2	O2	109.9°	109.4°
C3	C2	O6	115.5°	109.8°
C3	C2	O2	108.2°	109.4°
C2	C3	C4	108.5°	109.0°
C2	C3	H31	112.6°	109.5°
C2	C3	H32	112.6°	109.6°
O6	C2	O2	110.3°	109.4°
C2	O6	C6	113.6°	107.6°
C2	O2	HO2	109.8°	106.8°
C4	C3	H31	112.5°	109.5°
C4	C3	H32	112.5°	109.6°
C3	C4	O4	104.3°	109.6°
C3	C4	C5	110.7°	108.6°
C3	C4	H4	112.5°	109.6°
H31	C3	H32	97.9°	109.6°
O4	C4	C5	110.7°	109.7°
O4	C4	H4	112.4°	109.6°
C4	O4	HO4	104.3°	106.8°
C5	C4	H4	106.3°	109.6°
C4	C5	O5	110.7°	109.5°
C4	C5	C6	108.4°	109.0°
C4	C5	H5	110.3°	109.6°
O5	C5	C6	112.2°	109.7°
O5	C5	H5	106.4°	109.6°
C5	O5	HO5	110.7°	106.8°
C6	C5	H5	108.8°	109.4°
C5	C6	O6	111.7°	109.7°
C5	C6	C7	117.4°	109.4°
C5	C6	H6	100.3°	109.4°
O6	C6	C7	102.6°	109.4°
O6	C6	H6	115.7°	109.5°
C7	C6	H6	109.8°	109.4°
C6	C7	O7	147.5°	109.5°
C6	C7	C8	97.7°	109.5°
C6	C7	H7	92.4°	109.5°
O7	C7	C8	111.6°	109.5°
O7	C7	H7	67.5°	109.5°
C7	O7	HO7	147.5°	106.8°
C8	C7	H7	153.6°	109.5°
C7	C8	O8	107.3°	109.5°
C7	C8	H81	113.1°	109.5°
C7	C8	H82	113.1°	109.5°
O8	C8	H81	113.0°	109.5°
O8	C8	H82	113.0°	109.4°
C8	O8	P1	124.8°	106.8°
H81	C8	H82	97.4°	109.5°
O2P	P1	O3P	112.1°	109.5°
O2P	P1	O8	108.6°	109.5°
O2P	P1	O1P	105.2°	109.5°
P1	O2P	HOP2	112.0°	106.8°
O3P	P1	O8	107.4°	109.4°
O3P	P1	O1P	110.3°	109.4°
P1	O3P	HOP3	112.0°	106.8°
O8	P1	O1P	113.4°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1B	C1	O1A	C2	178.7°	180.0°
O1B	C1	C2	C3	28.6°	55.3°
O1B	C1	C2	O6	95.0°	65.0°
O1B	C1	C2	O2	146.3°	175.1°
O1A	C1	O1B	HO1B	180.0°	0.0°
O1A	C1	C2	C3	152.7°	124.7°
O1A	C1	C2	O6	83.7°	115.0°
O1A	C1	C2	O2	35.0°	4.9°
C2	C1	O1B	HO1B	1.2°	180.0°
C1	C2	C3	O6	117.1°	120.1°
C1	C2	C3	O2	118.7°	119.8°
C1	C2	O6	O2	118.4°	119.9°
C1	C2	C3	C4	167.9°	178.7°
C1	C2	C3	H31	66.8°	58.9°
C1	C2	C3	H32	42.7°	61.5°
C1	C2	O6	C6	165.4°	172.4°
C1	C2	O2	HO2	180.0°	59.9°
C3	C2	O6	O2	123.1°	120.1°
C2	C3	C4	H31	125.3°	119.8°
C2	C3	C4	H32	125.3°	119.9°
C2	C3	H31	H32	118.5°	120.3°
C2	C3	C4	O4	178.4°	173.6°
C2	C3	C4	C5	59.3°	53.8°
C2	C3	C4	H4	59.5°	66.0°
C3	C2	O6	C6	46.8°	67.6°
C3	C2	O2	HO2	62.7°	179.7°
O6	C2	C3	C4	50.8°	61.3°
O6	C2	C3	H31	176.1°	178.9°
O6	C2	C3	H32	74.4°	58.6°
C2	O6	C6	C5	48.8°	67.6°
C2	O6	C6	C7	175.4°	172.3°
C2	O6	C6	H6	65.1°	52.4°
O6	C2	O2	HO2	64.5°	60.0°
O2	C2	C3	C4	73.3°	58.8°
O2	C2	C3	H31	51.9°	61.0°
O2	C2	C3	H32	161.4°	178.7°
O2	C2	O6	C6	76.3°	52.5°
C4	C3	H31	H32	118.5°	120.2°
C3	C4	O4	C5	119.1°	119.2°
C3	C4	O4	H4	122.2°	120.4°
C3	C4	C5	H4	122.5°	119.8°
C3	C4	O4	HO4	180.0°	60.0°
C3	C4	C5	O5	60.4°	66.2°
C3	C4	C5	C6	63.1°	53.8°
C3	C4	C5	H5	177.9°	173.5°
H31	C3	C4	O4	56.3°	66.5°
H31	C3	C4	C5	175.4°	173.6°
H31	C3	C4	H4	65.8°	53.8°
H32	C3	C4	O4	53.1°	53.7°
H32	C3	C4	C5	66.0°	66.1°
H32	C3	C4	H4	175.3°	174.1°
O4	C4	C5	H4	122.4°	120.4°
O4	C4	C5	O5	54.8°	53.6°
O4	C4	C5	C6	178.3°	173.6°
O4	C4	C5	H5	62.7°	66.6°
C5	C4	O4	HO4	60.9°	179.2°
C4	C5	O5	C6	121.3°	119.6°
C4	C5	O5	H5	119.9°	120.2°
C4	C5	C6	H5	120.0°	119.8°
C4	C5	O5	HO5	180.0°	60.0°
C4	C5	C6	O6	56.8°	61.3°
C4	C5	C6	C7	174.8°	178.6°
C4	C5	C6	H6	66.4°	58.8°
H4	C4	O4	HO4	57.8°	60.4°
H4	C4	C5	O5	177.1°	174.0°
H4	C4	C5	C6	59.4°	66.0°
H4	C4	C5	H5	59.6°	53.8°
O5	C5	C6	H5	117.4°	120.3°
O5	C5	C6	O6	65.8°	58.6°
O5	C5	C6	C7	52.3°	61.5°
O5	C5	C6	H6	171.1°	178.7°
C6	C5	O5	HO5	58.7°	179.6°
C5	C6	O6	C7	126.6°	120.1°
C5	C6	O6	H6	113.9°	120.1°
C5	C6	C7	H6	113.6°	119.8°
C5	C6	C7	O7	98.2°	59.9°
C5	C6	C7	C8	56.4°	179.9°
C5	C6	C7	H7	148.0°	60.1°
H5	C5	O5	HO5	60.1°	60.2°
H5	C5	C6	O6	176.8°	178.9°
H5	C5	C6	C7	65.2°	58.8°
H5	C5	C6	H6	53.6°	61.0°
O6	C6	C7	H6	123.5°	119.9°
O6	C6	C7	O7	24.7°	179.9°
O6	C6	C7	C8	179.3°	59.9°
O6	C6	C7	H7	25.2°	60.1°
C6	C7	O7	C8	152.8°	120.0°
C6	C7	O7	H7	55.7°	120.0°
C6	C7	C8	H7	111.5°	120.0°
C6	C7	O7	HO7	179.9°	60.0°
C6	C7	C8	O8	142.0°	175.0°
C6	C7	C8	H81	16.8°	55.0°
C6	C7	C8	H82	92.8°	65.0°
H6	C6	C7	O7	148.2°	60.0°
H6	C6	C7	C8	57.2°	60.0°
H6	C6	C7	H7	98.4°	180.0°
O7	C7	C8	H7	82.8°	120.0°
O7	C7	C8	O8	52.3°	65.0°
O7	C7	C8	H81	177.6°	175.0°
O7	C7	C8	H82	72.9°	55.0°
C8	C7	O7	HO7	27.1°	60.0°
C7	C8	O8	H81	125.3°	120.0°
C7	C8	O8	H82	125.3°	120.0°
C7	C8	H81	H82	119.0°	120.0°
C7	C8	O8	P1	45.0°	180.0°
H7	C7	O7	HO7	124.4°	180.0°
H7	C7	C8	O8	30.5°	55.0°
H7	C7	C8	H81	94.7°	65.0°
H7	C7	C8	H82	155.8°	175.0°
O8	C8	H81	H82	118.9°	120.0°
C8	O8	P1	O2P	30.3°	175.0°
C8	O8	P1	O3P	91.0°	65.0°
C8	O8	P1	O1P	146.8°	54.9°
H81	C8	O8	P1	170.3°	60.0°
H82	C8	O8	P1	80.3°	60.0°
O2P	P1	O3P	O8	119.2°	120.0°
O2P	P1	O3P	O1P	116.8°	120.0°
O2P	P1	O8	O1P	116.5°	120.1°
O2P	P1	O3P	HOP3	179.9°	59.9°
O3P	P1	O8	O1P	122.1°	119.9°
O3P	P1	O2P	HOP2	180.0°	60.0°
O8	P1	O2P	HOP2	61.6°	180.0°
O8	P1	O3P	HOP3	60.9°	60.1°
O1P	P1	O2P	HOP2	60.1°	60.0°
O1P	P1	O3P	HOP3	63.1°	180.0°

Definition date:	2004-08-18
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB