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DO6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C12O11sing1.43Å1.44Å
O11C6sing1.36Å1.37Å
C9O7sing1.43Å1.43Å
O7C1sing1.36Å1.37Å
C6C1doub1.39Å1.39ÅAromatic
C6C5sing1.38Å1.38ÅAromatic
C1C2sing1.39Å1.40ÅAromatic
C5C4doub1.40Å1.39ÅAromatic
C2O8sing1.36Å1.36Å
C2C3doub1.38Å1.37ÅAromatic
C4C3sing1.40Å1.39ÅAromatic
C4C13sing1.48Å1.48Å
O8C10sing1.43Å1.43Å
O14C13doub1.22Å1.23Å
C13C15sing1.47Å1.51Å
C15C16sing1.48Å1.46ÅAromatic
C15C19doub1.36Å1.36ÅAromatic
C20C16doub1.39Å1.39ÅAromatic
C20C21sing1.38Å1.40ÅAromatic
C16C17sing1.40Å1.39ÅAromatic
C27C19sing1.51Å1.48Å
C19O18sing1.34Å1.37ÅAromatic
C21C22doub1.39Å1.39ÅAromatic
C17O18sing1.35Å1.38ÅAromatic
C17C23doub1.39Å1.38ÅAromatic
C22C23sing1.39Å1.40ÅAromatic
C22O24sing1.36Å1.37Å
C23O26sing1.36Å1.35Å
C25O24sing1.43Å1.42Å
C3H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C12H3sing1.09Å1.10Å
C12H4sing1.09Å1.10Å
C12H5sing1.09Å1.10Å
C9H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C10H9sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
C20H12sing1.08Å1.08Å
C21H13sing1.08Å1.08Å
C25H14sing1.09Å1.10Å
C25H15sing1.09Å1.10Å
C25H16sing1.09Å1.10Å
O26H17sing0.97Å0.95Å
C27H18sing1.09Å1.10Å
C27H19sing1.09Å1.10Å
C27H20sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12O11C6117.9°117.0°
O11C12H3109.5°109.4°
O11C12H4109.4°109.5°
O11C12H5109.5°109.5°
O11C6C1115.3°119.9°
O11C6C5124.7°120.0°
C9O7C1113.5°117.0°
O7C9H6109.5°109.5°
O7C9H7109.5°109.5°
O7C9H8109.5°109.5°
O7C1C6119.1°119.9°
O7C1C2120.6°120.0°
C1C6C5120.0°120.1°
C6C1C2119.8°120.1°
C6C5C4119.9°119.9°
C6C5H2120.1°120.1°
C1C2O8116.5°120.0°
C1C2C3120.2°120.1°
C5C4C3120.4°119.9°
C5C4C13118.4°120.1°
C4C5H2120.1°120.0°
O8C2C3123.3°120.0°
C2O8C10117.0°117.0°
C2C3C4119.7°119.9°
C2C3H1120.2°120.1°
C3C4C13121.2°120.0°
C4C3H1120.2°120.0°
C4C13O14117.7°120.0°
C4C13C15121.0°119.9°
O8C10H9109.5°109.5°
O8C10H10109.5°109.5°
O8C10H11109.5°109.4°
O14C13C15121.3°120.0°
C13C15C16128.7°127.1°
C13C15C19124.9°127.2°
C16C15C19106.3°105.7°
C15C16C20136.3°134.2°
C15C16C17105.3°105.4°
C15C19C27134.0°125.1°
C15C19O18110.9°109.8°
C16C20C21120.6°119.8°
C20C16C17118.3°120.4°
C16C20H12119.7°120.1°
C20C21C22120.0°120.2°
C21C20H12119.7°120.1°
C20C21H13120.0°119.9°
C16C17O18110.4°107.7°
C16C17C23122.1°119.3°
C27C19O18115.1°125.1°
C19C27H18109.5°109.5°
C19C27H19109.5°109.5°
C19C27H20109.4°109.5°
C19O18C17107.1°111.4°
C21C22C23119.8°120.5°
C21C22O24125.5°119.7°
C22C21H13120.0°119.9°
O18C17C23127.4°133.1°
C17C23C22119.1°119.8°
C17C23O26121.1°120.1°
C23C22O24114.7°119.8°
C22C23O26119.7°120.1°
C22O24C25117.2°117.0°
C23O26H17109.5°114.0°
O24C25H14109.5°109.5°
O24C25H15109.4°109.5°
O24C25H16109.5°109.5°
H3C12H4109.4°109.5°
H3C12H5109.5°109.4°
H4C12H5109.5°109.5°
H6C9H7109.5°109.5°
H6C9H8109.5°109.4°
H7C9H8109.4°109.5°
H9C10H10109.5°109.5°
H9C10H11109.5°109.5°
H10C10H11109.5°109.5°
H14C25H15109.5°109.5°
H14C25H16109.5°109.4°
H15C25H16109.5°109.5°
H18C27H19109.4°109.4°
H18C27H20109.5°109.5°
H19C27H20109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12O11C6C1172.2°177.7°
C12O11C6C56.3°2.5°
O11C12H3H4120.0°120.0°
O11C12H3H5120.0°120.0°
O11C12H4H5120.0°120.1°
O11C6C1O79.4°0.0°
O11C6C1C5178.6°179.7°
O11C6C1C2178.6°179.9°
O11C6C5C4178.2°180.0°
O11C6C5H21.8°0.0°
C6O11C12H3180.0°57.6°
C6O11C12H460.0°177.6°
C6O11C12H560.0°62.3°
C9O7C1C676.3°90.0°
C9O7C1C2111.7°90.0°
O7C9H6H7120.0°120.0°
O7C9H6H8120.0°120.0°
O7C9H7H8120.0°120.1°
O7C1C6C2172.0°179.9°
O7C1C6C5169.2°179.7°
O7C1C2O812.4°0.1°
O7C1C2C3168.0°180.0°
C1O7C9H6180.0°180.0°
C1O7C9H760.0°60.0°
C1O7C9H860.0°60.0°
C1C6C5C40.3°0.2°
C6C1C2O8175.7°180.0°
C6C1C2C33.8°0.1°
C1C6C5H2179.7°179.7°
C5C6C1C22.8°0.2°
C6C5C4H2180.0°180.0°
C6C5C4C32.3°0.0°
C6C5C4C13178.3°180.0°
C1C2O8C3179.5°179.9°
C1C2C3C41.8°0.4°
C1C2O8C10178.5°174.5°
C1C2C3H1178.2°180.0°
C5C4C3C21.3°0.4°
C5C4C3C13179.3°180.0°
C5C4C13O1423.2°133.0°
C5C4C13C15158.9°47.0°
C5C4C3H1178.7°180.0°
O8C2C3C4177.7°179.7°
O8C2C3H12.3°0.1°
C2O8C10H9180.0°175.2°
C2O8C10H1060.0°55.2°
C2O8C10H1160.0°64.8°
C2C3C4H1180.0°179.6°
C2C3C4C13179.4°179.7°
C3C2O8C102.0°5.4°
C3C4C13O14156.1°47.0°
C3C4C13C1521.8°133.0°
C3C4C5H2177.7°180.0°
C4C13O14C15177.9°180.0°
C4C13C15C1634.8°172.4°
C4C13C15C19144.7°7.9°
C13C4C3H10.6°0.0°
C13C4C5H21.7°0.0°
O8C10H9H10120.0°120.0°
O8C10H9H11120.0°120.0°
O8C10H10H11120.0°120.0°
O14C13C15C16147.4°7.6°
O14C13C15C1933.1°172.1°
C13C15C16C19179.5°179.7°
C13C15C16C206.3°0.0°
C13C15C16C17178.8°180.0°
C13C15C19C271.6°0.0°
C13C15C19O18179.3°179.9°
C15C16C20C17174.5°180.0°
C15C16C20C21175.4°180.0°
C16C15C19C27178.0°179.8°
C16C15C19O180.3°0.4°
C15C16C17O181.0°0.0°
C15C16C17C23178.4°180.0°
C15C16C20H124.6°0.0°
C19C15C16C20174.2°179.8°
C19C15C16C170.8°0.2°
C15C19C27O18177.6°179.8°
C15C19O18C170.3°0.4°
C15C19C27H18177.7°88.0°
C15C19C27H1962.4°152.0°
C15C19C27H2057.6°32.1°
C16C20C21H12180.0°180.0°
C16C20C21C221.3°0.0°
C20C16C17O18175.0°180.0°
C20C16C17C232.4°0.0°
C16C20C21H13178.6°180.0°
C21C20C16C170.9°0.0°
C20C21C22H13180.0°180.0°
C20C21C22C232.2°0.0°
C20C21C22O24178.0°180.0°
C16C17O18C190.9°0.2°
C16C17O18C23177.2°179.9°
C16C17C23C221.5°0.1°
C16C17C23O26179.0°179.9°
C17C16C20H12179.1°180.0°
C27C19O18C17177.8°179.8°
C19C27H18H19120.0°120.0°
C19C27H18H20120.0°120.1°
C19C27H19H20120.0°120.0°
C19O18C17C23178.1°179.7°
O18C19C27H180.0°91.8°
O18C19C27H19120.0°28.1°
O18C19C27H20120.0°148.1°
C21C22C23C170.9°0.1°
C21C22C23O24179.7°180.0°
C21C22C23O26176.7°179.9°
C21C22O24C250.8°0.0°
C22C21C20H12178.7°180.0°
O18C17C23C22175.4°180.0°
O18C17C23O262.1°0.0°
C17C23C22O26177.6°180.0°
C17C23C22O24179.4°180.0°
C17C23O26H17180.0°90.0°
C23C22O24C25179.5°179.9°
C23C22C21H13177.7°179.9°
C22C23O26H172.4°90.0°
O24C22C23O263.0°0.0°
O24C22C21H132.0°0.0°
C22O24C25H14180.0°60.0°
C22O24C25H1560.0°180.0°
C22O24C25H1660.0°60.0°
O24C25H14H15120.0°120.0°
O24C25H14H16120.0°119.9°
O24C25H15H16120.0°120.0°
H3C12H4H5120.0°120.0°
H6C9H7H8120.0°120.0°
H9C10H10H11120.0°120.0°
H12C20C21H131.4°0.0°
H14C25H15H16120.0°120.0°
H18C27H19H20120.0°120.0°

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PDB entries from 2024-07-17

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