Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DNT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C13C12sing1.53Å1.49Å
C13H131sing1.09Å1.12Å
C13H132sing1.09Å1.11Å
C13H133sing1.09Å1.12Å
C12C11sing1.53Å1.52Å
C12H121sing1.09Å1.11Å
C12H122sing1.09Å1.12Å
C11C9sing1.53Å1.52Å
C11H111sing1.09Å1.11Å
C11H112sing1.09Å1.11Å
C9C8sing1.53Å1.41Å
C9H91sing1.09Å1.12Å
C9H92sing1.09Å1.12Å
C8C7sing1.53Å1.37Å
C8H81sing1.09Å1.12Å
C8H82sing1.09Å1.11Å
C7C10sing1.53Å1.53Å
C7C6sing1.51Å1.55Å
C7H7sing1.09Å1.11Å
C10H101sing1.09Å1.12Å
C10H102sing1.09Å1.12Å
C10H103sing1.09Å1.11Å
C6C1doub1.39Å1.51ÅAromatic
C6C5sing1.38Å1.42ÅAromatic
C1O1sing1.36Å1.27Å
C1C2sing1.39Å1.53ÅAromatic
O1HO1sing0.97Å0.95Å
C2C3doub1.38Å1.43ÅAromatic
C2N6sing1.48Å1.26Å
C3C4sing1.38Å1.53ÅAromatic
C3H3sing1.08Å1.10Å
C4C5doub1.38Å1.54ÅAromatic
C4N4sing1.48Å1.27Å
C5H5sing1.08Å1.10Å
N4O61sing1.22Å1.31Å
N4O41doub1.22Å1.29Å
N6O62sing1.22Å1.29Å
N6O42doub1.22Å1.29Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12C13H131117.1°109.5°
C12C13H132109.5°109.5°
C12C13H133109.5°109.4°
C13C12C11117.1°109.5°
C13C12H121109.4°109.5°
C13C12H122109.4°109.5°
H131C13H132109.5°109.5°
H131C13H133109.4°109.5°
H132C13H133100.7°109.5°
C11C12H121109.5°109.5°
C11C12H122109.5°109.5°
C12C11C9115.3°109.5°
C12C11H111110.0°109.4°
C12C11H112110.1°109.5°
H121C12H122100.6°109.5°
C9C11H111110.1°109.5°
C9C11H112110.1°109.5°
C11C9C8119.5°109.5°
C11C9H91108.6°109.4°
C11C9H92108.6°109.5°
H111C11H112100.2°109.5°
C8C9H91108.7°109.5°
C8C9H92108.6°109.5°
C9C8C7129.4°109.5°
C9C8H81105.2°109.5°
C9C8H82105.3°109.5°
H91C9H92101.4°109.5°
C7C8H81105.3°109.4°
C7C8H82105.3°109.5°
C8C7C10130.5°109.5°
C8C7C6115.5°109.5°
C8C7H760.8°109.5°
H81C8H82104.0°109.5°
C10C7C6114.0°109.5°
C10C7H769.8°109.5°
C7C10H101130.5°109.5°
C7C10H102104.9°109.5°
C7C10H103104.9°109.5°
C6C7H7175.8°109.4°
C7C6C1120.7°120.1°
C7C6C5120.6°120.0°
H101C10H102104.9°109.5°
H101C10H103104.9°109.4°
H102C10H103104.2°109.5°
C1C6C5118.7°120.0°
C6C1O1118.4°120.0°
C6C1C2121.7°119.9°
C6C5C4121.7°120.0°
C6C5H5115.1°120.0°
O1C1C2119.9°120.1°
C1O1HO1118.4°106.8°
C1C2C3119.0°119.9°
C1C2N6119.1°120.0°
C3C2N6121.9°120.1°
C2C3C4120.5°120.1°
C2C3H3116.4°119.9°
C2N6O62122.4°120.0°
C2N6O42120.0°120.0°
C4C3H3123.1°120.0°
C3C4C5118.4°120.1°
C3C4N4119.6°119.9°
C5C4N4121.9°119.9°
C4C5H5123.2°120.0°
C4N4O61119.2°120.0°
C4N4O41123.1°120.0°
O61N4O41117.7°120.1°
O62N6O42117.6°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12C13H131H132125.3°120.0°
C12C13H131H133125.2°120.0°
C12C13H132H133115.2°120.0°
C13C12C11H121125.3°120.1°
C13C12C11H122125.3°120.0°
C13C12H121H122115.2°120.0°
C13C12C11C9179.5°179.9°
C13C12C11H11154.2°60.0°
C13C12C11H11255.3°60.0°
H131C13H132H133115.1°120.1°
H131C13C12C11180.0°60.0°
H131C13C12H12154.8°60.0°
H131C13C12H12254.6°180.0°
H132C13C12C1154.7°60.0°
H132C13C12H12170.6°180.0°
H132C13C12H122180.0°60.0°
H133C13C12C1154.8°180.0°
H133C13C12H121179.9°60.0°
H133C13C12H12270.5°60.0°
C11C12H121H122115.2°120.0°
C12C11C9H111125.2°120.0°
C12C11C9H112125.2°120.0°
C12C11H111H112115.9°120.0°
C12C11C9C8179.9°180.0°
C12C11C9H9154.7°60.0°
C12C11C9H9254.7°60.0°
H121C12C11C955.2°60.0°
H121C12C11H111179.5°180.0°
H121C12C11H11270.0°60.0°
H122C12C11C954.2°60.0°
H122C12C11H11171.1°60.0°
H122C12C11H112179.4°180.0°
C9C11H111H112115.9°120.0°
C11C9C8H91125.3°119.9°
C11C9C8H92125.3°120.0°
C11C9H91H92114.2°120.0°
C11C9C8C7179.8°180.0°
C11C9C8H8154.5°60.1°
C11C9C8H8255.0°60.0°
H111C11C9C854.7°60.1°
H111C11C9H91180.0°180.0°
H111C11C9H9270.6°60.0°
H112C11C9C854.8°60.0°
H112C11C9H9170.5°60.0°
H112C11C9H92179.9°180.0°
C8C9H91H92114.3°120.0°
C9C8C7H81125.2°120.0°
C9C8C7H82125.3°120.0°
C9C8H81H82110.4°120.0°
C9C8C7C10179.8°65.0°
C9C8C7C60.2°175.0°
C9C8C7H7177.6°55.0°
H91C9C8C755.0°60.0°
H91C9C8H81179.8°180.0°
H91C9C8H8270.3°60.0°
H92C9C8C754.5°60.0°
H92C9C8H8170.7°60.0°
H92C9C8H82179.8°180.0°
C7C8H81H82110.4°120.0°
C8C7C10C6179.6°120.0°
C8C7C10H72.5°120.0°
C8C7C6H727.5°120.0°
C8C7C10H101180.0°60.0°
C8C7C10H10254.8°180.0°
C8C7C10H10354.7°60.0°
C8C7C6C170.8°120.2°
C8C7C6C5109.9°60.0°
H81C8C7C1054.5°175.0°
H81C8C7C6125.0°55.0°
H81C8C7H757.2°65.0°
H82C8C7C1055.0°55.0°
H82C8C7C6125.5°65.0°
H82C8C7H752.3°175.0°
C10C7C6H7152.8°120.0°
C7C10H101H102125.2°120.0°
C7C10H101H103125.3°120.0°
C7C10H102H103110.0°120.0°
C10C7C6C1109.6°119.7°
C10C7C6C569.8°60.1°
C6C7C10H1010.4°180.0°
C6C7C10H102124.8°60.0°
C6C7C10H103125.7°60.0°
C7C6C1C5179.3°179.8°
C7C6C1O10.5°0.2°
C7C6C1C2179.5°179.7°
C7C6C5C4179.9°180.0°
C7C6C5H50.0°0.0°
H7C7C10H101177.6°60.0°
H7C7C10H10257.2°60.0°
H7C7C10H10352.3°180.0°
H7C7C6C143.3°0.2°
H7C7C6C5137.4°180.0°
H101C10H102H103110.0°120.0°
C6C1O1C2179.0°179.5°
C6C1O1HO1180.0°90.5°
C6C1C2C31.2°0.5°
C6C1C2N6179.9°179.7°
C1C6C5C40.7°0.3°
C1C6C5H5179.3°179.8°
C5C6C1O1179.8°180.0°
C5C6C1C21.2°0.5°
C6C5C4C30.4°0.0°
C6C5C4H5180.0°180.0°
C6C5C4N4179.8°180.0°
O1C1C2C3179.8°180.0°
O1C1C2N60.9°0.2°
C2C1O1HO11.0°89.9°
C1C2C3N6178.9°179.8°
C1C2C3C40.8°0.3°
C1C2C3H3179.2°179.8°
C1C2N6O621.1°179.8°
C1C2N6O42179.5°0.2°
C2C3C4H3180.0°179.9°
C2C3C4C50.4°0.1°
C2C3C4N4179.8°180.0°
C3C2N6O62180.0°0.0°
C3C2N6O420.6°180.0°
N6C2C3C4179.7°179.9°
N6C2C3H30.3°0.0°
C2N6O62O42179.4°180.0°
C3C4C5N4179.4°179.9°
C3C4C5H5179.7°180.0°
C3C4N4O610.7°180.0°
C3C4N4O41179.2°0.1°
H3C3C4C5179.6°180.0°
H3C3C4N40.2°0.1°
C5C4N4O61179.9°0.1°
C5C4N4O410.1°180.0°
N4C4C5H50.3°0.0°
C4N4O61O41179.9°179.9°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon