DNR
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.50Å | 1.48Å | |
| P | OP2 | sing | 1.62Å | 1.48Å | |
| P | O5' | sing | 1.62Å | 1.62Å | |
| P | OP3 | sing | 1.62Å | 17.49Å | |
| OP2 | HOP2 | sing | 0.98Å | 0.95Å | |
| O5' | C5' | sing | 1.42Å | 1.43Å | |
| C5' | C4' | sing | 1.52Å | 1.52Å | |
| C5' | H5' | sing | 1.09Å | 1.08Å | |
| C5' | H5'' | sing | 1.09Å | 1.09Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.52Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.09Å | |
| O4' | C1' | sing | 1.43Å | 1.45Å | |
| C1' | N1 | sing | 1.43Å | 1.48Å | |
| C1' | C2' | sing | 1.52Å | 1.51Å | |
| C1' | H1' | sing | 1.10Å | 1.08Å | |
| N1 | C6 | sing | 1.39Å | 1.36Å | |
| N1 | C2 | sing | 1.41Å | 1.40Å | |
| C6 | C5 | doub | 1.34Å | 1.34Å | |
| C6 | H6 | sing | 1.09Å | 1.09Å | |
| C2 | O2 | doub | 1.22Å | 1.23Å | |
| C2 | N3 | sing | 1.45Å | 1.37Å | |
| N3 | C4 | doub | 1.33Å | 1.34Å | |
| N3 | HN3 | sing | 1.02Å | 1.02Å | |
| C4 | N4 | sing | 1.32Å | 1.33Å | |
| C4 | C5 | sing | 1.48Å | 1.43Å | |
| N4 | H41 | sing | 1.02Å | 1.01Å | |
| N4 | H42 | sing | 1.02Å | 1.01Å | |
| C5 | H5 | sing | 1.08Å | 1.09Å | |
| C2' | C3' | sing | 1.51Å | 1.50Å | |
| C2' | H2' | sing | 1.10Å | 1.09Å | |
| C2' | H2'' | sing | 1.09Å | 1.08Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | H3' | sing | 1.09Å | 1.09Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.98Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.8° | 115.3° |
| OP1 | P | O5' | 108.1° | 115.0° |
| OP1 | P | OP3 | 46.0° | 115.0° |
| OP2 | P | O5' | 108.1° | 103.7° |
| OP2 | P | OP3 | 103.1° | 103.3° |
| P | OP2 | HOP2 | 119.8° | 118.9° |
| O5' | P | OP3 | 74.6° | 102.9° |
| P | O5' | C5' | 120.5° | 118.5° |
| P | OP3 | HOP3 | 46.1° | 118.9° |
| O5' | C5' | C4' | 112.4° | 108.9° |
| O5' | C5' | H5' | 108.9° | 109.0° |
| O5' | C5' | H5'' | 109.2° | 108.9° |
| C4' | C5' | H5' | 108.1° | 110.3° |
| C4' | C5' | H5'' | 109.1° | 110.3° |
| C5' | C4' | O4' | 110.9° | 107.9° |
| C5' | C4' | C3' | 111.7° | 112.9° |
| C5' | C4' | H4' | 109.1° | 109.5° |
| H5' | C5' | H5'' | 109.0° | 109.3° |
| O4' | C4' | C3' | 107.4° | 106.2° |
| O4' | C4' | H4' | 108.7° | 107.9° |
| C4' | O4' | C1' | 109.6° | 109.3° |
| C3' | C4' | H4' | 109.0° | 112.2° |
| C4' | C3' | C2' | 104.4° | 103.1° |
| C4' | C3' | O3' | 111.0° | 109.9° |
| C4' | C3' | H3' | 109.8° | 113.5° |
| O4' | C1' | N1 | 110.9° | 109.3° |
| O4' | C1' | C2' | 106.4° | 107.4° |
| O4' | C1' | H1' | 109.1° | 108.0° |
| N1 | C1' | C2' | 112.2° | 112.8° |
| N1 | C1' | H1' | 109.5° | 107.8° |
| C1' | N1 | C6 | 120.4° | 118.3° |
| C1' | N1 | C2 | 118.2° | 120.7° |
| C2' | C1' | H1' | 108.7° | 111.5° |
| C1' | C2' | C3' | 105.2° | 102.5° |
| C1' | C2' | H2' | 111.2° | 110.6° |
| C1' | C2' | H2'' | 109.6° | 111.7° |
| C6 | N1 | C2 | 121.4° | 121.0° |
| N1 | C6 | C5 | 120.9° | 122.7° |
| N1 | C6 | H6 | 119.5° | 116.1° |
| N1 | C2 | O2 | 120.2° | 126.8° |
| N1 | C2 | N3 | 118.3° | 115.0° |
| C5 | C6 | H6 | 119.6° | 121.2° |
| C6 | C5 | C4 | 117.8° | 119.3° |
| C6 | C5 | H5 | 121.1° | 121.1° |
| O2 | C2 | N3 | 121.5° | 118.2° |
| C2 | N3 | C4 | 120.4° | 125.3° |
| C2 | N3 | HN3 | 119.7° | 118.6° |
| C4 | N3 | HN3 | 119.7° | 116.1° |
| N3 | C4 | N4 | 119.6° | 125.3° |
| N3 | C4 | C5 | 121.2° | 116.8° |
| N4 | C4 | C5 | 119.2° | 118.0° |
| C4 | N4 | H41 | 119.8° | 120.6° |
| C4 | N4 | H42 | 120.1° | 120.5° |
| C4 | C5 | H5 | 121.1° | 119.6° |
| H41 | N4 | H42 | 120.1° | 118.8° |
| C3' | C2' | H2' | 110.4° | 109.7° |
| C3' | C2' | H2'' | 109.8° | 114.1° |
| C2' | C3' | O3' | 111.3° | 109.7° |
| C2' | C3' | H3' | 109.9° | 113.2° |
| H2' | C2' | H2'' | 110.5° | 108.3° |
| O3' | C3' | H3' | 110.2° | 107.4° |
| C3' | O3' | HO3' | 111.0° | 107.3° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | O5' | 124.3° | 126.6° |
| OP1 | P | OP2 | OP3 | 46.5° | 126.3° |
| OP1 | P | O5' | OP3 | 32.0° | 125.8° |
| OP1 | P | OP2 | HOP2 | 180.0° | 48.8° |
| OP1 | P | O5' | C5' | 178.3° | 179.9° |
| OP1 | P | OP3 | HOP3 | 180.0° | 48.0° |
| OP2 | P | O5' | OP3 | 99.0° | 107.4° |
| OP2 | P | O5' | C5' | 50.7° | 53.2° |
| OP2 | P | OP3 | HOP3 | 61.0° | 78.5° |
| O5' | P | OP2 | HOP2 | 55.7° | 175.4° |
| P | O5' | C5' | C4' | 178.1° | 180.0° |
| P | O5' | C5' | H5' | 62.1° | 59.6° |
| P | O5' | C5' | H5'' | 56.9° | 59.6° |
| O5' | P | OP3 | HOP3 | 44.5° | 173.8° |
| OP3 | P | OP2 | HOP2 | 133.5° | 77.5° |
| OP3 | P | O5' | C5' | 149.7° | 54.2° |
| O5' | C5' | C4' | H5' | 120.3° | 119.6° |
| O5' | C5' | C4' | H5'' | 121.3° | 119.5° |
| O5' | C5' | H5' | H5'' | 119.0° | 119.0° |
| O5' | C5' | C4' | O4' | 54.1° | 62.4° |
| O5' | C5' | C4' | C3' | 65.7° | 179.5° |
| O5' | C5' | C4' | H4' | 173.8° | 54.7° |
| C4' | C5' | H5' | H5'' | 118.5° | 121.5° |
| C5' | C4' | O4' | C3' | 122.4° | 121.4° |
| C5' | C4' | O4' | H4' | 119.9° | 118.2° |
| C5' | C4' | C3' | H4' | 120.6° | 124.3° |
| C5' | C4' | O4' | C1' | 120.1° | 108.6° |
| C5' | C4' | C3' | C2' | 104.1° | 88.8° |
| C5' | C4' | C3' | O3' | 135.9° | 154.2° |
| C5' | C4' | C3' | H3' | 13.7° | 34.0° |
| H5' | C5' | C4' | O4' | 66.2° | 57.1° |
| H5' | C5' | C4' | C3' | 174.0° | 60.0° |
| H5' | C5' | C4' | H4' | 53.5° | 174.3° |
| H5'' | C5' | C4' | O4' | 175.4° | 178.1° |
| H5'' | C5' | C4' | C3' | 55.6° | 61.0° |
| H5'' | C5' | C4' | H4' | 64.9° | 64.8° |
| O4' | C4' | C3' | H4' | 117.6° | 117.6° |
| C4' | O4' | C1' | N1 | 136.3° | 131.7° |
| C4' | O4' | C1' | C2' | 14.1° | 9.0° |
| C4' | O4' | C1' | H1' | 103.0° | 111.3° |
| O4' | C4' | C3' | C2' | 17.7° | 29.2° |
| O4' | C4' | C3' | O3' | 102.3° | 87.7° |
| O4' | C4' | C3' | H3' | 135.5° | 152.1° |
| C3' | C4' | O4' | C1' | 2.3° | 12.7° |
| C4' | C3' | C2' | C1' | 25.8° | 33.4° |
| C4' | C3' | C2' | O3' | 119.8° | 117.1° |
| C4' | C3' | C2' | H3' | 117.7° | 123.0° |
| C4' | C3' | C2' | H2' | 94.3° | 84.1° |
| C4' | C3' | C2' | H2'' | 143.6° | 154.3° |
| C4' | C3' | O3' | H3' | 121.9° | 123.9° |
| C4' | C3' | O3' | HO3' | 180.0° | 128.0° |
| H4' | C4' | O4' | C1' | 120.0° | 133.2° |
| H4' | C4' | C3' | C2' | 135.3° | 146.9° |
| H4' | C4' | C3' | O3' | 15.3° | 29.9° |
| H4' | C4' | C3' | H3' | 106.9° | 90.3° |
| O4' | C1' | N1 | C2' | 118.8° | 119.4° |
| O4' | C1' | N1 | H1' | 120.4° | 117.1° |
| O4' | C1' | C2' | H1' | 117.3° | 118.1° |
| O4' | C1' | N1 | C6 | 53.4° | 32.9° |
| O4' | C1' | N1 | C2 | 124.3° | 147.1° |
| O4' | C1' | C2' | C3' | 25.0° | 26.9° |
| O4' | C1' | C2' | H2' | 94.6° | 90.0° |
| O4' | C1' | C2' | H2'' | 143.0° | 149.4° |
| N1 | C1' | C2' | H1' | 121.3° | 121.4° |
| C1' | N1 | C6 | C2 | 177.6° | 180.0° |
| C1' | N1 | C6 | C5 | 177.2° | 180.0° |
| C1' | N1 | C6 | H6 | 3.5° | 0.0° |
| C1' | N1 | C2 | O2 | 2.3° | 0.1° |
| C1' | N1 | C2 | N3 | 177.3° | 180.0° |
| N1 | C1' | C2' | C3' | 146.4° | 147.4° |
| N1 | C1' | C2' | H2' | 26.8° | 30.6° |
| N1 | C1' | C2' | H2'' | 95.6° | 90.1° |
| C2' | C1' | N1 | C6 | 65.4° | 86.5° |
| C2' | C1' | N1 | C2 | 116.9° | 93.5° |
| C1' | C2' | C3' | H2' | 120.1° | 117.5° |
| C1' | C2' | C3' | H2'' | 117.9° | 120.8° |
| C1' | C2' | H2' | H2'' | 121.9° | 122.7° |
| C1' | C2' | C3' | O3' | 94.1° | 83.6° |
| C1' | C2' | C3' | H3' | 143.5° | 156.4° |
| H1' | C1' | N1 | C6 | 173.8° | 150.0° |
| H1' | C1' | N1 | C2 | 3.9° | 30.0° |
| H1' | C1' | C2' | C3' | 92.3° | 91.2° |
| H1' | C1' | C2' | H2' | 148.1° | 151.9° |
| H1' | C1' | C2' | H2'' | 25.7° | 31.3° |
| N1 | C6 | C5 | H6 | 179.3° | 180.0° |
| C6 | N1 | C2 | O2 | 180.0° | 180.0° |
| C6 | N1 | C2 | N3 | 0.4° | 0.0° |
| N1 | C6 | C5 | C4 | 0.2° | 0.0° |
| N1 | C6 | C5 | H5 | 179.8° | 180.0° |
| C2 | N1 | C6 | C5 | 0.5° | 0.0° |
| C2 | N1 | C6 | H6 | 178.9° | 180.0° |
| N1 | C2 | O2 | N3 | 179.6° | 179.9° |
| N1 | C2 | N3 | C4 | 0.0° | 0.0° |
| N1 | C2 | N3 | HN3 | 174.5° | 179.9° |
| C6 | C5 | C4 | N3 | 0.2° | 0.1° |
| C6 | C5 | C4 | N4 | 179.7° | 179.9° |
| C6 | C5 | C4 | H5 | 180.0° | 180.0° |
| H6 | C6 | C5 | C4 | 179.2° | 180.0° |
| H6 | C6 | C5 | H5 | 0.9° | 0.0° |
| O2 | C2 | N3 | C4 | 179.6° | 179.9° |
| O2 | C2 | N3 | HN3 | 5.1° | 0.0° |
| C2 | N3 | C4 | HN3 | 174.5° | 179.9° |
| C2 | N3 | C4 | N4 | 179.6° | 179.9° |
| C2 | N3 | C4 | C5 | 0.2° | 0.0° |
| N3 | C4 | N4 | C5 | 179.8° | 180.0° |
| N3 | C4 | N4 | H41 | 0.1° | 103.0° |
| N3 | C4 | N4 | H42 | 179.8° | 76.9° |
| N3 | C4 | C5 | H5 | 179.9° | 180.0° |
| HN3 | N3 | C4 | N4 | 5.1° | 0.0° |
| HN3 | N3 | C4 | C5 | 174.7° | 180.0° |
| C4 | N4 | H41 | H42 | 179.9° | 180.0° |
| N4 | C4 | C5 | H5 | 0.3° | 0.0° |
| C5 | C4 | N4 | H41 | 179.9° | 76.9° |
| C5 | C4 | N4 | H42 | 0.0° | 103.1° |
| C3' | C2' | H2' | H2'' | 121.7° | 125.1° |
| C2' | C3' | O3' | H3' | 122.2° | 123.4° |
| C2' | C3' | O3' | HO3' | 64.1° | 119.3° |
| H2' | C2' | C3' | O3' | 145.8° | 158.9° |
| H2' | C2' | C3' | H3' | 23.4° | 38.9° |
| H2'' | C2' | C3' | O3' | 23.8° | 37.2° |
| H2'' | C2' | C3' | H3' | 98.6° | 82.7° |
| H3' | C3' | O3' | HO3' | 58.1° | 4.1° |
