DNP
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.49Å | |
N | H | sing | 1.01Å | 0.98Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.50Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | HA | sing | 1.09Å | 1.08Å | |
CB | NG | sing | 1.47Å | 1.51Å | |
CB | HB2 | sing | 1.09Å | 1.08Å | |
CB | HB3 | sing | 1.09Å | 1.09Å | |
NG | HG1 | sing | 1.01Å | 1.05Å | |
NG | HG2 | sing | 1.01Å | 1.04Å | |
NG | HG3 | sing | 1.01Å | 1.04Å | |
C | O | doub | 1.21Å | 1.20Å | |
C | OXT | sing | 1.34Å | 1.31Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 122.0° | 106.7° |
CA | N | H2 | 111.8° | 106.7° |
N | CA | CB | 110.6° | 109.5° |
N | CA | C | 107.7° | 109.5° |
N | CA | HA | 109.6° | 109.5° |
H | N | H2 | 44.8° | 106.7° |
CB | CA | C | 108.3° | 109.4° |
CB | CA | HA | 112.0° | 109.5° |
CA | CB | NG | 108.8° | 109.4° |
CA | CB | HB2 | 110.8° | 109.5° |
CA | CB | HB3 | 108.1° | 109.5° |
C | CA | HA | 108.4° | 109.5° |
CA | C | O | 118.8° | 120.0° |
CA | C | OXT | 117.7° | 120.0° |
NG | CB | HB2 | 110.7° | 109.5° |
NG | CB | HB3 | 109.7° | 109.4° |
CB | NG | HG1 | 110.9° | 109.5° |
CB | NG | HG2 | 109.1° | 109.4° |
CB | NG | HG3 | 109.0° | 109.5° |
HB2 | CB | HB3 | 108.6° | 109.5° |
HG1 | NG | HG2 | 111.5° | 109.5° |
HG1 | NG | HG3 | 107.6° | 109.5° |
HG2 | NG | HG3 | 108.8° | 109.5° |
O | C | OXT | 123.4° | 120.0° |
C | OXT | HXT | 117.7° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 89.5° | 113.8° |
N | CA | CB | C | 117.8° | 120.0° |
N | CA | CB | HA | 122.7° | 120.0° |
N | CA | C | HA | 118.6° | 120.0° |
N | CA | CB | NG | 46.3° | 55.1° |
N | CA | CB | HB2 | 75.7° | 65.0° |
N | CA | CB | HB3 | 165.4° | 175.0° |
N | CA | C | O | 167.8° | 19.9° |
N | CA | C | OXT | 14.1° | 160.0° |
H | N | CA | CB | 5.3° | 173.8° |
H | N | CA | C | 123.5° | 53.8° |
H | N | CA | HA | 118.7° | 66.2° |
H2 | N | CA | CB | 54.7° | 60.0° |
H2 | N | CA | C | 172.9° | 60.0° |
H2 | N | CA | HA | 69.3° | 180.0° |
CB | CA | C | HA | 121.8° | 120.0° |
CA | CB | NG | HB2 | 122.0° | 120.1° |
CA | CB | NG | HB3 | 118.1° | 119.9° |
CA | CB | HB2 | HB3 | 118.6° | 120.0° |
CA | CB | NG | HG1 | 2.6° | 60.0° |
CA | CB | NG | HG2 | 120.5° | 60.1° |
CA | CB | NG | HG3 | 120.8° | 180.0° |
CB | CA | C | O | 72.5° | 100.0° |
CB | CA | C | OXT | 105.6° | 80.1° |
C | CA | CB | NG | 71.5° | 175.0° |
C | CA | CB | HB2 | 166.5° | 55.0° |
C | CA | CB | HB3 | 47.6° | 65.1° |
CA | C | O | OXT | 178.0° | 179.9° |
CA | C | OXT | HXT | 180.0° | 179.9° |
HA | CA | CB | NG | 169.0° | 65.0° |
HA | CA | CB | HB2 | 47.0° | 175.0° |
HA | CA | CB | HB3 | 71.9° | 54.9° |
HA | CA | C | O | 49.2° | 140.0° |
HA | CA | C | OXT | 132.6° | 39.9° |
NG | CB | HB2 | HB3 | 120.5° | 120.0° |
CB | NG | HG1 | HG2 | 121.7° | 120.0° |
CB | NG | HG1 | HG3 | 119.1° | 120.0° |
CB | NG | HG2 | HG3 | 118.8° | 120.0° |
HB2 | CB | NG | HG1 | 124.6° | 180.0° |
HB2 | CB | NG | HG2 | 1.5° | 60.0° |
HB2 | CB | NG | HG3 | 117.1° | 60.0° |
HB3 | CB | NG | HG1 | 115.5° | 59.9° |
HB3 | CB | NG | HG2 | 121.4° | 180.0° |
HB3 | CB | NG | HG3 | 2.7° | 60.1° |
HG1 | NG | HG2 | HG3 | 118.5° | 120.0° |
O | C | OXT | HXT | 2.0° | 0.0° |