Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DNM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OXTCsing1.34Å38.81Å
OCdoub1.21Å1.23Å
CCAsing1.51Å1.54Å
CANsing1.47Å1.48Å
C1Nsing1.47Å1.47Å
NHsing1.01Å1.00Å
OXTHXTsing0.97Å0.00Å
H1C1sing1.09Å1.10Å
C1H1Bsing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
CBCAsing1.53Å1.54Å
CAHAsing1.09Å1.10Å
HBCBsing1.09Å1.10Å
HBACBsing1.09Å1.10Å
CBCGsing1.53Å1.54Å
CECDsing1.53Å1.53Å
HDACDsing1.09Å1.10Å
CDHDsing1.09Å1.10Å
CDCGsing1.53Å1.53Å
HEACEsing1.09Å1.10Å
HEBCEsing1.09Å1.10Å
CEHEsing1.09Å1.10Å
CGHGAsing1.09Å1.10Å
CGHGsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OXTCO128.5°120.0°
OXTCCA108.2°119.9°
COXTHXT90.0°117.0°
OCCA121.5°120.1°
CCAN113.8°109.4°
CCACB111.0°109.5°
CCAHA106.6°109.5°
CANC1117.1°111.0°
CANH107.5°111.0°
NCACB111.0°109.4°
NCAHA107.4°109.5°
C1NH107.5°111.0°
NC1H1109.5°109.5°
NC1H1B109.4°109.5°
NC1H1A109.5°109.4°
H1C1H1B109.5°109.5°
H1C1H1A109.4°109.5°
H1BC1H1A109.5°109.5°
CBCAHA106.7°109.5°
CACBHB108.9°109.4°
CACBHBA108.9°109.5°
CACBCG111.8°109.5°
HBCBHBA109.5°109.5°
HBCBCG108.9°109.5°
HBACBCG108.9°109.5°
CBCGCD112.3°109.5°
CBCGHGA108.8°109.5°
CBCGHG108.8°109.4°
CECDHDA108.7°109.4°
CECDHD108.8°109.5°
CECDCG112.4°109.5°
CDCEHEA109.5°109.5°
CDCEHEB109.5°109.5°
CDCEHE109.5°109.5°
HDACDHD109.5°109.5°
HDACDCG108.7°109.5°
HDCDCG108.7°109.5°
CDCGHGA108.7°109.5°
CDCGHG108.7°109.5°
HEACEHEB109.5°109.4°
HEACEHE109.5°109.4°
HEBCEHE109.4°109.5°
HGACGHG109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OXTCOCA162.9°179.7°
OXTCCAN125.3°179.8°
OXTCCACB108.7°60.3°
OXTCCAHA7.1°59.8°
OCCAN40.7°0.0°
OCOXTHXT90.0°0.2°
OCCACB85.3°119.9°
OCCAHA158.9°120.0°
CCANCB126.0°120.0°
CCANHA117.8°120.0°
CCANC154.6°85.0°
CCANH66.5°151.1°
CACOXTHXT90.0°179.9°
CCACBHA115.8°120.1°
CCACBHB57.1°55.1°
CCACBHBA62.3°64.9°
CCACBCG177.4°175.0°
CANC1H121.1°123.9°
CANC1H1180.0°180.0°
CANC1H1B60.0°60.0°
CANC1H1A60.0°60.0°
NCACBHA116.7°120.0°
NCACBHB175.4°175.0°
NCACBHBA65.3°55.0°
NCACBCG55.0°65.1°
NC1H1H1B120.0°120.0°
NC1H1H1A120.0°120.0°
NC1H1BH1A120.0°119.9°
C1NCACB71.4°155.0°
C1NCAHA172.4°35.0°
HNC1H158.9°56.1°
HNC1H1B178.9°63.9°
HNC1H1A61.1°176.1°
HNCACB167.5°31.1°
HNCAHA51.3°89.0°
H1C1H1BH1A120.0°120.0°
CACBHBHBA118.9°120.0°
CACBHBCG122.1°120.0°
CACBHBACG122.1°120.0°
CACBCGCD170.0°180.0°
CACBCGHGA69.5°59.9°
CACBCGHG49.6°60.0°
HACACBHB58.7°65.0°
HACACBHBA178.0°175.0°
HACACBCG61.6°54.9°
HBCBHBACG119.0°120.0°
HBCBCGCD49.7°60.1°
HBCBCGHGA170.1°60.0°
HBCBCGHG70.7°180.0°
HBACBCGCD69.6°60.0°
HBACBCGHGA50.8°180.0°
HBACBCGHG170.0°60.0°
CBCGCDCE64.1°180.0°
CBCGCDHDA56.3°60.1°
CBCGCDHD175.5°60.0°
CBCGCDHGA120.4°120.0°
CBCGCDHG120.4°120.0°
CBCGHGAHG118.7°119.9°
CECDHDAHD118.7°120.0°
CECDHDACG122.7°120.0°
CECDHDCG122.7°120.0°
CDCEHEAHEB120.0°120.0°
CDCEHEAHE120.0°120.1°
CDCEHEBHE120.0°120.0°
CECDCGHGA56.3°60.0°
CECDCGHG175.5°60.0°
HDACDHDCG118.7°120.0°
HDACDCEHEA59.6°180.0°
HDACDCEHEB60.5°60.0°
HDACDCEHE179.6°60.0°
HDACDCGHGA176.8°59.9°
HDACDCGHG64.1°180.0°
HDCDCEHEA59.6°60.0°
HDCDCEHEB179.6°180.0°
HDCDCEHE60.4°60.0°
HDCDCGHGA64.1°180.0°
HDCDCGHG55.1°60.0°
CGCDCEHEA180.0°60.0°
CGCDCEHEB60.0°60.0°
CGCDCEHE60.0°180.0°
CDCGHGAHG118.7°120.1°
HEACEHEBHE120.0°119.9°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon