Obsolete: DNJ

DNJ was replaced with NOJ on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	C2	sing	1.53Å	1.54Å
C1	N5	sing	1.47Å	1.36Å
C1	H11	sing	1.09Å	1.11Å
C1	H12	sing	1.09Å	1.11Å
C2	O2	sing	1.43Å	1.42Å
C2	C3	sing	1.53Å	1.50Å
C2	H2	sing	1.09Å	1.11Å
O2	HO2	sing	0.97Å	0.95Å
C3	O3	sing	1.43Å	1.39Å
C3	C4	sing	1.53Å	1.49Å
C3	H3	sing	1.09Å	1.11Å
O3	HO3	sing	0.97Å	0.95Å
C4	O4	sing	1.43Å	1.47Å
C4	C5	sing	1.53Å	1.49Å
C4	H4	sing	1.09Å	1.12Å
O4	HO4	sing	0.97Å	0.95Å
C5	C6	sing	1.53Å	1.52Å
C5	N5	sing	1.47Å	1.33Å
C5	H5	sing	1.09Å	1.11Å
C6	O6	sing	1.43Å	1.49Å
C6	H61	sing	1.09Å	1.11Å
C6	H62	sing	1.09Å	1.12Å
O6	HO6	sing	0.97Å	0.95Å
N5	HN5	sing	1.01Å	1.02Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	C1	N5	104.4°	109.8°
C2	C1	H11	114.2°	109.4°
C2	C1	H12	114.1°	109.5°
C1	C2	O2	111.5°	109.5°
C1	C2	C3	109.2°	109.2°
C1	C2	H2	111.3°	109.5°
N5	C1	H11	114.1°	109.4°
N5	C1	H12	114.1°	109.5°
C1	N5	C5	114.2°	107.3°
C1	N5	HN5	110.5°	106.7°
H11	C1	H12	96.3°	109.3°
O2	C2	C3	117.0°	109.6°
O2	C2	H2	102.5°	109.5°
C2	O2	HO2	111.4°	106.9°
C3	C2	H2	104.9°	109.5°
C2	C3	O3	109.4°	109.6°
C2	C3	C4	106.3°	108.9°
C2	C3	H3	111.4°	109.5°
O3	C3	C4	108.9°	109.7°
O3	C3	H3	108.9°	109.5°
C3	O3	HO3	109.4°	106.8°
C4	C3	H3	111.9°	109.6°
C3	C4	O4	106.0°	109.5°
C3	C4	C5	112.8°	109.2°
C3	C4	H4	108.8°	109.5°
O4	C4	C5	106.9°	109.5°
O4	C4	H4	114.6°	109.5°
C4	O4	HO4	106.0°	106.8°
C5	C4	H4	107.9°	109.6°
C4	C5	C6	109.9°	109.5°
C4	C5	N5	114.5°	109.7°
C4	C5	H5	105.6°	109.4°
C6	C5	N5	109.3°	109.4°
C6	C5	H5	111.1°	109.4°
C5	C6	O6	105.3°	109.5°
C5	C6	H61	113.8°	109.5°
C5	C6	H62	113.8°	109.4°
N5	C5	H5	106.3°	109.4°
C5	N5	HN5	110.5°	106.7°
O6	C6	H61	113.8°	109.5°
O6	C6	H62	113.7°	109.5°
C6	O6	HO6	105.3°	106.9°
H61	C6	H62	96.7°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	C1	N5	H11	125.3°	120.1°
C2	C1	N5	H12	125.2°	120.2°
C2	C1	H11	H12	120.0°	119.9°
C1	C2	O2	C3	126.7°	119.8°
C1	C2	O2	H2	119.2°	120.0°
C1	C2	C3	H2	119.5°	119.8°
C1	C2	O2	HO2	180.0°	59.9°
C1	C2	C3	O3	175.4°	175.6°
C1	C2	C3	C4	58.0°	55.6°
C1	C2	C3	H3	64.1°	64.3°
C2	C1	N5	C5	66.2°	65.6°
C2	C1	N5	HN5	168.6°	179.7°
N5	C1	H11	H12	120.0°	119.9°
N5	C1	C2	O2	162.0°	178.6°
N5	C1	C2	C3	67.2°	61.3°
N5	C1	C2	H2	48.2°	58.6°
C1	N5	C5	C4	58.0°	65.6°
C1	N5	C5	C6	178.2°	174.2°
C1	N5	C5	HN5	125.3°	114.1°
C1	N5	C5	H5	58.2°	54.4°
H11	C1	C2	O2	36.7°	61.3°
H11	C1	C2	C3	167.5°	58.7°
H11	C1	C2	H2	77.1°	178.6°
H11	C1	N5	C5	168.5°	54.5°
H11	C1	N5	HN5	43.3°	59.6°
H12	C1	C2	O2	72.8°	58.5°
H12	C1	C2	C3	58.0°	178.5°
H12	C1	C2	H2	173.5°	61.6°
H12	C1	N5	C5	59.1°	174.3°
H12	C1	N5	HN5	66.2°	60.1°
O2	C2	C3	H2	112.7°	120.2°
O2	C2	C3	O3	56.8°	64.5°
O2	C2	C3	C4	174.2°	175.6°
O2	C2	C3	H3	63.7°	55.7°
C3	C2	O2	HO2	53.3°	179.7°
C2	C3	O3	C4	115.8°	119.5°
C2	C3	O3	H3	122.0°	120.2°
C2	C3	C4	H3	121.8°	119.8°
C2	C3	O3	HO3	179.9°	59.9°
C2	C3	C4	O4	163.3°	175.6°
C2	C3	C4	C5	46.7°	55.7°
C2	C3	C4	H4	73.0°	64.4°
H2	C2	O2	HO2	60.8°	60.1°
H2	C2	C3	O3	55.9°	55.7°
H2	C2	C3	C4	61.5°	64.3°
H2	C2	C3	H3	176.4°	175.9°
O3	C3	C4	H3	120.4°	120.2°
O3	C3	C4	O4	78.9°	64.5°
O3	C3	C4	C5	164.5°	175.6°
O3	C3	C4	H4	44.7°	55.6°
C4	C3	O3	HO3	64.2°	179.4°
C3	C4	O4	C5	120.5°	119.8°
C3	C4	O4	H4	120.0°	120.1°
C3	C4	C5	H4	120.2°	120.0°
C3	C4	O4	HO4	180.0°	60.0°
C3	C4	C5	C6	169.8°	178.5°
C3	C4	C5	N5	46.3°	61.4°
C3	C4	C5	H5	70.2°	58.6°
H3	C3	O3	HO3	58.1°	60.3°
H3	C3	C4	O4	41.5°	55.8°
H3	C3	C4	C5	75.1°	64.1°
H3	C3	C4	H4	165.2°	175.8°
O4	C4	C5	H4	123.7°	120.1°
O4	C4	C5	C6	74.1°	58.5°
O4	C4	C5	N5	162.4°	178.6°
O4	C4	C5	H5	45.8°	61.4°
C5	C4	O4	HO4	59.5°	179.7°
C4	C5	C6	N5	126.5°	120.3°
C4	C5	C6	H5	116.6°	119.9°
C4	C5	N5	H5	116.2°	120.0°
C4	C5	C6	O6	114.1°	179.9°
C4	C5	C6	H61	120.6°	60.1°
C4	C5	C6	H62	11.1°	59.8°
C4	C5	N5	HN5	176.7°	179.7°
H4	C4	O4	HO4	60.0°	60.1°
H4	C4	C5	C6	49.6°	61.5°
H4	C4	C5	N5	73.9°	58.6°
H4	C4	C5	H5	169.5°	178.6°
C6	C5	N5	H5	120.0°	119.8°
C5	C6	O6	H61	125.3°	120.0°
C5	C6	O6	H62	125.3°	120.0°
C5	C6	H61	H62	119.8°	119.9°
C5	C6	O6	HO6	180.0°	179.9°
C6	C5	N5	HN5	52.9°	60.1°
N5	C5	C6	O6	12.4°	59.8°
N5	C5	C6	H61	112.9°	60.2°
N5	C5	C6	H62	137.6°	179.9°
H5	C5	C6	O6	129.3°	60.0°
H5	C5	C6	H61	4.0°	180.0°
H5	C5	C6	H62	105.5°	60.1°
H5	C5	N5	HN5	67.1°	59.7°
O6	C6	H61	H62	119.6°	120.0°
H61	C6	O6	HO6	54.7°	60.0°
H62	C6	O6	HO6	54.7°	59.9°

Definition date:	1999-07-08
Last modified:	2008-10-14
Release status:	OBS
Processing site:	RCSB
Replaced by:	NOJ
Derived from:	1DIE