DNA

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O1A	C1J	doub	1.22Å	1.25Å
C1J	O1B	sing	1.35Å	1.25Å
O1B	HO1B	sing	0.97Å	0.95Å
C1K	O1C	sing	1.36Å	1.36Å
O1C	HO1C	sing	0.97Å	0.95Å
O1D	C1M	sing	1.36Å	1.36Å
O1D	HO1D	sing	0.97Å	0.95Å
C1F	C1E	doub	1.39Å	1.39Å	Aromatic
C1E	C1G	sing	1.36Å	1.39Å	Aromatic
C1E	H1E	sing	1.08Å	1.08Å
C1F	C1H	sing	1.36Å	1.39Å	Aromatic
C1F	H1F	sing	1.08Å	1.08Å
C1G	C1N	doub	1.40Å	1.39Å	Aromatic
C1G	H1G	sing	1.08Å	1.08Å
C1H	C1O	doub	1.40Å	1.39Å	Aromatic
C1H	H1H	sing	1.08Å	1.08Å
C1L	C1I	sing	1.41Å	1.39Å	Aromatic
C1K	C1I	doub	1.36Å	1.39Å	Aromatic
C1I	H1I	sing	1.08Å	1.08Å
C1L	C1J	sing	1.47Å	1.53Å
C1N	C1K	sing	1.41Å	1.39Å	Aromatic
C1M	C1L	doub	1.39Å	1.39Å	Aromatic
C1O	C1M	sing	1.41Å	1.39Å	Aromatic
C1O	C1N	sing	1.42Å	1.39Å	Aromatic

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1A	C1J	O1B	124.5°	120.0°
O1A	C1J	C1L	118.4°	120.0°
C1J	O1B	HO1B	109.5°	117.0°
O1B	C1J	C1L	117.1°	120.0°
C1K	O1C	HO1C	109.5°	114.1°
O1C	C1K	C1I	119.6°	120.0°
O1C	C1K	C1N	120.8°	119.9°
C1M	O1D	HO1D	109.5°	114.0°
O1D	C1M	C1L	121.2°	120.3°
O1D	C1M	C1O	119.2°	120.3°
C1F	C1E	C1G	120.7°	121.0°
C1F	C1E	H1E	119.6°	119.5°
C1E	C1F	C1H	119.6°	120.9°
C1E	C1F	H1F	120.2°	119.6°
C1G	C1E	H1E	119.7°	119.5°
C1E	C1G	C1N	119.7°	119.7°
C1E	C1G	H1G	120.1°	120.1°
C1H	C1F	H1F	120.2°	119.6°
C1F	C1H	C1O	119.8°	119.7°
C1F	C1H	H1H	120.1°	120.2°
C1N	C1G	H1G	120.1°	120.1°
C1G	C1N	C1K	120.2°	121.0°
C1G	C1N	C1O	119.5°	119.3°
C1O	C1H	H1H	120.1°	120.2°
C1H	C1O	C1M	119.2°	121.1°
C1H	C1O	C1N	120.7°	119.4°
C1L	C1I	C1K	120.1°	120.9°
C1L	C1I	H1I	119.9°	119.6°
C1I	C1L	C1J	119.0°	119.8°
C1I	C1L	C1M	120.3°	120.4°
C1K	C1I	H1I	119.9°	119.6°
C1I	C1K	C1N	119.5°	120.1°
C1J	C1L	C1M	120.7°	119.8°
C1K	C1N	C1O	120.3°	119.7°
C1L	C1M	C1O	119.6°	119.4°
C1M	C1O	C1N	120.1°	119.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1A	C1J	O1B	C1L	179.1°	180.0°
O1A	C1J	O1B	HO1B	0.0°	0.0°
O1A	C1J	C1L	C1I	178.3°	180.0°
O1A	C1J	C1L	C1M	2.8°	0.0°
O1B	C1J	C1L	C1I	2.6°	0.0°
O1B	C1J	C1L	C1M	176.3°	180.0°
HO1B	O1B	C1J	C1L	179.1°	180.0°
O1C	C1K	C1N	C1G	0.2°	0.1°
O1C	C1K	C1I	C1L	179.4°	179.2°
O1C	C1K	C1I	C1N	179.5°	180.0°
O1C	C1K	C1I	H1I	0.6°	0.0°
O1C	C1K	C1N	C1O	179.4°	179.5°
HO1C	O1C	C1K	C1I	180.0°	90.0°
HO1C	O1C	C1K	C1N	0.5°	90.0°
O1D	C1M	C1O	C1H	0.5°	0.0°
O1D	C1M	C1L	C1I	179.8°	179.5°
O1D	C1M	C1L	C1J	0.9°	0.5°
O1D	C1M	C1L	C1O	179.6°	180.0°
O1D	C1M	C1O	C1N	179.8°	179.8°
HO1D	O1D	C1M	C1L	0.4°	90.1°
HO1D	O1D	C1M	C1O	180.0°	90.0°
C1F	C1E	C1G	H1E	180.0°	179.7°
C1E	C1F	C1H	H1F	180.0°	180.0°
C1F	C1E	C1G	C1N	0.1°	0.3°
C1F	C1E	C1G	H1G	179.9°	179.8°
C1E	C1F	C1H	C1O	0.1°	0.0°
C1E	C1F	C1H	H1H	179.9°	180.0°
C1G	C1E	C1F	C1H	0.1°	0.0°
C1G	C1E	C1F	H1F	179.9°	180.0°
C1E	C1G	C1N	H1G	180.0°	179.9°
C1E	C1G	C1N	C1K	179.1°	180.0°
C1E	C1G	C1N	C1O	0.2°	0.6°
H1E	C1E	C1F	C1H	179.9°	179.7°
H1E	C1E	C1F	H1F	0.1°	0.3°
H1E	C1E	C1G	C1N	179.9°	179.9°
H1E	C1E	C1G	H1G	0.1°	0.0°
C1F	C1H	C1O	H1H	180.0°	180.0°
C1F	C1H	C1O	C1M	179.2°	180.0°
C1F	C1H	C1O	C1N	0.0°	0.2°
H1F	C1F	C1H	C1O	179.9°	179.9°
H1F	C1F	C1H	H1H	0.2°	0.0°
C1G	C1N	C1O	C1H	0.2°	0.5°
C1G	C1N	C1K	C1I	179.4°	180.0°
C1G	C1N	C1K	C1O	179.3°	179.4°
C1G	C1N	C1O	C1M	179.4°	179.7°
H1G	C1G	C1N	C1K	0.9°	0.1°
H1G	C1G	C1N	C1O	179.8°	179.5°
C1H	C1O	C1N	C1K	179.1°	179.9°
C1H	C1O	C1M	C1L	179.1°	179.9°
C1H	C1O	C1M	C1N	179.2°	179.8°
H1H	C1H	C1O	C1M	0.8°	0.1°
H1H	C1H	C1O	C1N	180.0°	179.7°
C1L	C1I	C1K	H1I	180.0°	179.1°
C1I	C1L	C1J	C1M	178.9°	180.0°
C1L	C1I	C1K	C1N	0.1°	0.9°
C1I	C1L	C1M	C1O	0.2°	0.6°
C1K	C1I	C1L	C1J	178.7°	179.1°
C1K	C1I	C1L	C1M	0.2°	0.9°
C1I	C1K	C1N	C1O	0.1°	0.6°
H1I	C1I	C1L	C1J	1.3°	0.0°
H1I	C1I	C1K	C1N	179.9°	180.0°
H1I	C1I	C1L	C1M	179.9°	180.0°
C1J	C1L	C1M	C1O	178.7°	179.5°
C1K	C1N	C1O	C1M	0.1°	0.3°
C1L	C1M	C1O	C1N	0.2°	0.3°

Definition date:	2009-07-10
Last modified:	2020-06-17
Release status:	REL
Processing site:	RCSB
Derived from:	3I64