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Summary Geometry Related PDB entries

DMN

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	C2	sing	1.47Å	1.48Å
N1	C3	sing	1.47Å	1.49Å
N1	HN1	sing	1.01Å	1.02Å
C2	H21	sing	1.09Å	1.11Å
C2	H22	sing	1.09Å	1.11Å
C2	H23	sing	1.09Å	1.12Å
C3	H31	sing	1.09Å	1.12Å
C3	H32	sing	1.09Å	1.12Å
C3	H33	sing	1.09Å	1.11Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N1	C3	112.8°	106.7°
C2	N1	HN1	111.0°	106.7°
N1	C2	H21	112.8°	109.5°
N1	C2	H22	111.0°	109.5°
N1	C2	H23	111.0°	109.5°
C3	N1	HN1	111.0°	106.7°
N1	C3	H31	112.9°	109.5°
N1	C3	H32	111.0°	109.5°
N1	C3	H33	111.0°	109.5°
H21	C2	H22	111.0°	109.4°
H21	C2	H23	111.0°	109.5°
H22	C2	H23	99.3°	109.5°
H31	C3	H32	111.0°	109.5°
H31	C3	H33	110.9°	109.4°
H32	C3	H33	99.3°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	N1	C3	HN1	125.2°	113.9°
N1	C2	H21	H22	125.3°	120.0°
N1	C2	H21	H23	125.3°	120.1°
N1	C2	H22	H23	116.8°	120.0°
C2	N1	C3	H31	180.0°	180.0°
C2	N1	C3	H32	54.7°	60.0°
C2	N1	C3	H33	54.7°	60.0°
C3	N1	C2	H21	180.0°	180.0°
C3	N1	C2	H22	54.7°	60.0°
C3	N1	C2	H23	54.7°	60.0°
N1	C3	H31	H32	125.3°	120.1°
N1	C3	H31	H33	125.3°	120.0°
N1	C3	H32	H33	116.9°	120.0°
HN1	N1	C2	H21	54.8°	66.1°
HN1	N1	C2	H22	179.9°	53.8°
HN1	N1	C2	H23	70.5°	173.8°
HN1	N1	C3	H31	54.8°	66.1°
HN1	N1	C3	H32	70.5°	173.8°
HN1	N1	C3	H33	180.0°	53.8°
H21	C2	H22	H23	116.9°	119.9°
H31	C3	H32	H33	116.8°	119.9°

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