DMC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.22Å | 1.23Å | |
C | CA | sing | 1.41Å | 1.57Å | |
C | OXT | sing | 1.35Å | 1.53Å | |
CA | CB1 | doub | 1.35Å | 1.66Å | |
CA | CB2 | sing | 1.51Å | 1.43Å | |
CB1 | CG | sing | 1.47Å | 1.72Å | |
CB1 | HB1 | sing | 1.08Å | 1.10Å | |
CB2 | HB21 | sing | 1.09Å | 1.11Å | |
CB2 | HB22 | sing | 1.09Å | 1.12Å | |
CB2 | HB23 | sing | 1.09Å | 1.12Å | |
CG | CD1 | doub | 1.41Å | 1.37Å | Aromatic |
CG | CD2 | sing | 1.40Å | 1.41Å | Aromatic |
CD1 | CE1 | sing | 1.38Å | 1.39Å | Aromatic |
CD1 | OH | sing | 1.36Å | 1.06Å | |
CE1 | CZ | doub | 1.39Å | 1.41Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.10Å | |
CZ | CE2 | sing | 1.39Å | 1.36Å | Aromatic |
CZ | N | sing | 1.39Å | 1.22Å | |
CE2 | CD2 | doub | 1.36Å | 1.34Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.10Å | |
CD2 | HD2 | sing | 1.08Å | 1.10Å | |
OH | HO | sing | 0.97Å | 0.95Å | |
N | CH1 | sing | 1.47Å | 1.50Å | |
N | CH2 | sing | 1.46Å | 1.86Å | |
CH1 | CM1 | sing | 1.53Å | 1.28Å | |
CH1 | HH11 | sing | 1.09Å | 1.12Å | |
CH1 | HH12 | sing | 1.09Å | 1.11Å | |
CH2 | CM2 | sing | 1.53Å | 1.77Å | |
CH2 | HH21 | sing | 1.09Å | 1.11Å | |
CH2 | HH22 | sing | 1.09Å | 1.12Å | |
CM1 | HM11 | sing | 1.09Å | 1.12Å | |
CM1 | HM12 | sing | 1.09Å | 1.12Å | |
CM1 | HM13 | sing | 1.09Å | 1.12Å | |
CM2 | HM21 | sing | 1.09Å | 1.11Å | |
CM2 | HM22 | sing | 1.09Å | 1.12Å | |
CM2 | HM23 | sing | 1.09Å | 1.12Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 129.2° | 119.9° |
O | C | OXT | 107.3° | 120.0° |
CA | C | OXT | 123.4° | 120.0° |
C | CA | CB1 | 104.4° | 120.1° |
C | CA | CB2 | 111.3° | 120.0° |
C | OXT | HXT | 107.3° | 106.8° |
CB1 | CA | CB2 | 144.2° | 119.9° |
CA | CB1 | CG | 123.2° | 120.0° |
CA | CB1 | HB1 | 116.6° | 120.0° |
CA | CB2 | HB21 | 111.3° | 109.4° |
CA | CB2 | HB22 | 111.6° | 109.5° |
CA | CB2 | HB23 | 111.5° | 109.5° |
CG | CB1 | HB1 | 120.2° | 120.0° |
CB1 | CG | CD1 | 116.9° | 120.2° |
CB1 | CG | CD2 | 123.0° | 120.1° |
HB21 | CB2 | HB22 | 111.5° | 109.5° |
HB21 | CB2 | HB23 | 111.5° | 109.4° |
HB22 | CB2 | HB23 | 98.8° | 109.5° |
CD1 | CG | CD2 | 120.0° | 119.7° |
CG | CD1 | CE1 | 117.8° | 119.6° |
CG | CD1 | OH | 129.6° | 120.2° |
CG | CD2 | CE2 | 121.1° | 120.1° |
CG | CD2 | HD2 | 122.2° | 119.9° |
CE1 | CD1 | OH | 112.6° | 120.2° |
CD1 | CE1 | CZ | 121.2° | 119.9° |
CD1 | CE1 | HE1 | 118.6° | 120.1° |
CD1 | OH | HO | 129.6° | 106.8° |
CZ | CE1 | HE1 | 120.1° | 120.0° |
CE1 | CZ | CE2 | 119.1° | 120.3° |
CE1 | CZ | N | 122.2° | 119.9° |
CE2 | CZ | N | 118.6° | 119.9° |
CZ | CE2 | CD2 | 120.7° | 120.4° |
CZ | CE2 | HE2 | 120.3° | 119.8° |
CZ | N | CH1 | 119.1° | 120.0° |
CZ | N | CH2 | 107.8° | 120.1° |
CD2 | CE2 | HE2 | 119.0° | 119.8° |
CE2 | CD2 | HD2 | 116.7° | 120.0° |
CH1 | N | CH2 | 126.2° | 120.0° |
N | CH1 | CM1 | 168.3° | 109.5° |
N | CH1 | HH11 | 93.4° | 109.4° |
N | CH1 | HH12 | 93.4° | 109.5° |
N | CH2 | CM2 | 125.7° | 109.5° |
N | CH2 | HH21 | 106.5° | 109.5° |
N | CH2 | HH22 | 106.5° | 109.5° |
CM1 | CH1 | HH11 | 93.3° | 109.5° |
CM1 | CH1 | HH12 | 93.4° | 109.5° |
CH1 | CM1 | HM11 | 168.4° | 109.5° |
CH1 | CM1 | HM12 | 93.4° | 109.5° |
CH1 | CM1 | HM13 | 93.4° | 109.5° |
HH11 | CH1 | HH12 | 109.3° | 109.5° |
CM2 | CH2 | HH21 | 106.5° | 109.5° |
CM2 | CH2 | HH22 | 106.5° | 109.4° |
CH2 | CM2 | HM21 | 125.7° | 109.5° |
CH2 | CM2 | HM22 | 106.5° | 109.5° |
CH2 | CM2 | HM23 | 106.5° | 109.5° |
HH21 | CH2 | HH22 | 103.1° | 109.4° |
HM11 | CM1 | HM12 | 93.3° | 109.5° |
HM11 | CM1 | HM13 | 93.3° | 109.5° |
HM12 | CM1 | HM13 | 109.1° | 109.5° |
HM21 | CM2 | HM22 | 106.5° | 109.5° |
HM21 | CM2 | HM23 | 106.5° | 109.4° |
HM22 | CM2 | HM23 | 103.0° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 179.7° | 179.9° |
O | C | CA | CB1 | 180.0° | 0.1° |
O | C | CA | CB2 | 2.6° | 180.0° |
O | C | OXT | HXT | 180.0° | 0.0° |
C | CA | CB1 | CB2 | 175.9° | 179.9° |
C | CA | CB1 | CG | 177.8° | 171.6° |
C | CA | CB1 | HB1 | 2.2° | 8.4° |
C | CA | CB2 | HB21 | 180.0° | 6.6° |
C | CA | CB2 | HB22 | 54.7° | 126.6° |
C | CA | CB2 | HB23 | 54.7° | 113.3° |
CA | C | OXT | HXT | 0.3° | 179.9° |
OXT | C | CA | CB1 | 0.2° | 180.0° |
OXT | C | CA | CB2 | 177.7° | 0.1° |
CA | CB1 | CG | HB1 | 180.0° | 179.9° |
CB1 | CA | CB2 | HB21 | 4.2° | 173.3° |
CB1 | CA | CB2 | HB22 | 129.5° | 53.3° |
CB1 | CA | CB2 | HB23 | 121.1° | 66.7° |
CA | CB1 | CG | CD1 | 179.8° | 143.0° |
CA | CB1 | CG | CD2 | 3.6° | 37.1° |
CB2 | CA | CB1 | CG | 1.9° | 8.4° |
CB2 | CA | CB1 | HB1 | 178.1° | 171.5° |
CA | CB2 | HB21 | HB22 | 125.3° | 120.0° |
CA | CB2 | HB21 | HB23 | 125.3° | 119.9° |
CA | CB2 | HB22 | HB23 | 117.4° | 120.0° |
CB1 | CG | CD1 | CD2 | 176.3° | 179.9° |
CB1 | CG | CD1 | CE1 | 176.8° | 179.7° |
CB1 | CG | CD1 | OH | 2.2° | 0.1° |
CB1 | CG | CD2 | CE2 | 178.1° | 179.9° |
CB1 | CG | CD2 | HD2 | 1.9° | 0.0° |
HB1 | CB1 | CG | CD1 | 0.1° | 37.0° |
HB1 | CB1 | CG | CD2 | 176.3° | 142.9° |
HB21 | CB2 | HB22 | HB23 | 117.4° | 120.0° |
CG | CD1 | CE1 | OH | 179.2° | 179.8° |
CG | CD1 | CE1 | CZ | 2.0° | 0.5° |
CG | CD1 | CE1 | HE1 | 177.9° | 179.9° |
CD1 | CG | CD2 | CE2 | 2.0° | 0.0° |
CD1 | CG | CD2 | HD2 | 178.0° | 180.0° |
CG | CD1 | OH | HO | 180.0° | 90.0° |
CD2 | CG | CD1 | CE1 | 0.5° | 0.2° |
CD2 | CG | CD1 | OH | 178.5° | 180.0° |
CG | CD2 | CE2 | CZ | 0.9° | 0.1° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.9° |
CG | CD2 | CE2 | HE2 | 179.2° | 180.0° |
CD1 | CE1 | CZ | HE1 | 180.0° | 179.5° |
CD1 | CE1 | CZ | CE2 | 3.2° | 0.6° |
CD1 | CE1 | CZ | N | 178.2° | 179.8° |
CE1 | CD1 | OH | HO | 0.9° | 89.8° |
OH | CD1 | CE1 | CZ | 178.8° | 179.7° |
OH | CD1 | CE1 | HE1 | 1.2° | 0.3° |
CE1 | CZ | CE2 | N | 178.6° | 179.6° |
CE1 | CZ | CE2 | CD2 | 1.7° | 0.4° |
CE1 | CZ | CE2 | HE2 | 178.3° | 179.8° |
CE1 | CZ | N | CH1 | 165.4° | 173.6° |
CE1 | CZ | N | CH2 | 12.8° | 6.3° |
HE1 | CE1 | CZ | CE2 | 176.8° | 180.0° |
HE1 | CE1 | CZ | N | 1.8° | 0.4° |
CZ | CE2 | CD2 | HE2 | 180.0° | 179.9° |
CZ | CE2 | CD2 | HD2 | 179.1° | 180.0° |
CE2 | CZ | N | CH1 | 16.1° | 6.8° |
CE2 | CZ | N | CH2 | 168.6° | 173.3° |
N | CZ | CE2 | CD2 | 179.7° | 180.0° |
N | CZ | CE2 | HE2 | 0.3° | 0.2° |
CZ | N | CH1 | CH2 | 147.0° | 179.9° |
CZ | N | CH1 | CM1 | 22.2° | 90.1° |
CZ | N | CH1 | HH11 | 147.4° | 150.0° |
CZ | N | CH1 | HH12 | 103.0° | 29.9° |
CZ | N | CH2 | CM2 | 3.1° | 89.8° |
CZ | N | CH2 | HH21 | 122.1° | 30.2° |
CZ | N | CH2 | HH22 | 128.4° | 150.2° |
HE2 | CE2 | CD2 | HD2 | 0.8° | 0.1° |
N | CH1 | CM1 | HH11 | 125.2° | 120.0° |
N | CH1 | CM1 | HH12 | 125.2° | 120.0° |
N | CH1 | HH11 | HH12 | 94.8° | 120.0° |
CH1 | N | CH2 | CM2 | 153.2° | 90.1° |
CH1 | N | CH2 | HH21 | 27.9° | 149.8° |
CH1 | N | CH2 | HH22 | 81.6° | 29.9° |
N | CH1 | CM1 | HM11 | 180.0° | 180.0° |
N | CH1 | CM1 | HM12 | 54.7° | 60.0° |
N | CH1 | CM1 | HM13 | 54.7° | 60.0° |
CH2 | N | CH1 | CM1 | 169.2° | 90.0° |
CH2 | N | CH1 | HH11 | 65.5° | 30.0° |
CH2 | N | CH1 | HH12 | 44.0° | 150.0° |
N | CH2 | CM2 | HH21 | 125.3° | 120.0° |
N | CH2 | CM2 | HH22 | 125.2° | 120.0° |
N | CH2 | HH21 | HH22 | 111.9° | 120.0° |
N | CH2 | CM2 | HM21 | 180.0° | 179.9° |
N | CH2 | CM2 | HM22 | 54.7° | 60.0° |
N | CH2 | CM2 | HM23 | 54.7° | 60.0° |
CM1 | CH1 | HH11 | HH12 | 94.8° | 120.0° |
CH1 | CM1 | HM11 | HM12 | 125.3° | 120.0° |
CH1 | CM1 | HM11 | HM13 | 125.3° | 120.0° |
CH1 | CM1 | HM12 | HM13 | 94.8° | 120.0° |
HH11 | CH1 | CM1 | HM11 | 54.8° | 60.0° |
HH11 | CH1 | CM1 | HM12 | 179.9° | 60.0° |
HH11 | CH1 | CM1 | HM13 | 70.5° | 180.0° |
HH12 | CH1 | CM1 | HM11 | 54.8° | 60.0° |
HH12 | CH1 | CM1 | HM12 | 70.5° | 180.0° |
HH12 | CH1 | CM1 | HM13 | 179.9° | 60.0° |
CM2 | CH2 | HH21 | HH22 | 111.9° | 120.0° |
CH2 | CM2 | HM21 | HM22 | 125.3° | 120.0° |
CH2 | CM2 | HM21 | HM23 | 125.3° | 120.0° |
CH2 | CM2 | HM22 | HM23 | 111.9° | 120.0° |
HH21 | CH2 | CM2 | HM21 | 54.7° | 59.9° |
HH21 | CH2 | CM2 | HM22 | 180.0° | 179.9° |
HH21 | CH2 | CM2 | HM23 | 70.6° | 60.0° |
HH22 | CH2 | CM2 | HM21 | 54.8° | 60.0° |
HH22 | CH2 | CM2 | HM22 | 70.5° | 60.0° |
HH22 | CH2 | CM2 | HM23 | 179.9° | 180.0° |
HM11 | CM1 | HM12 | HM13 | 94.6° | 120.0° |
HM21 | CM2 | HM22 | HM23 | 111.9° | 120.0° |