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DLZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C7C7Asing1.51Å1.40Å
C7AC5Adoub1.38Å1.40Å
C7AN8sing1.35Å1.43Å
C5AC6sing1.51Å1.41Å
C5AN5sing1.32Å1.41Å
N5C4Adoub1.32Å1.43Å
C4AC4sing1.48Å1.41Å
C4AC8sing1.42Å1.39Å
C4O4doub1.22Å1.23Å
C4N3sing1.35Å1.38Å
N3C2sing1.34Å1.37Å
C2O2doub1.22Å1.22Å
C2N1sing1.33Å1.37Å
N1C8doub1.33Å1.38Å
C8N8sing1.36Å1.38Å
N8C1'sing1.47Å1.49Å
C1'C2'sing1.53Å1.55Å
C2'O2'sing1.43Å1.45Å
C2'C3'sing1.53Å1.53Å
C3'O3'sing1.43Å1.41Å
C3'C4'sing1.53Å1.52Å
C4'O4'sing1.43Å1.44Å
C4'C5'sing1.53Å1.53Å
C5'O5'sing1.43Å1.43Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C7H7Bsing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C6H6Bsing1.09Å1.10Å
N3HN3sing0.97Å1.00Å
C1'H1'sing1.09Å1.10Å
C1'H1'Asing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
O4'HO4'sing0.97Å0.95Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O5'HO5'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C7C7AC5A118.7°119.8°
C7C7AN8121.9°119.8°
C7AC7H7109.5°109.5°
C7AC7H7A109.5°109.5°
C7AC7H7B109.5°109.5°
C5AC7AN8119.3°120.5°
C7AC5AC6119.9°119.4°
C7AC5AN5118.9°121.2°
C7AN8C8120.4°118.8°
C7AN8C1'122.4°120.6°
C6C5AN5121.2°119.4°
C5AC6H6109.5°109.5°
C5AC6H6A109.5°109.5°
C5AC6H6B109.4°109.4°
C5AN5C4A121.8°120.3°
N5C4AC4124.5°121.9°
N5C4AC8117.7°120.2°
C4C4AC8117.8°117.8°
C4AC4O4124.6°121.3°
C4AC4N3120.1°117.4°
C4AC8N1120.5°119.2°
C4AC8N8121.8°119.0°
O4C4N3115.3°121.3°
C4N3C2120.6°120.6°
C4N3HN3119.7°119.8°
N3C2O2121.2°118.4°
N3C2N1119.7°123.2°
C2N3HN3119.7°119.6°
O2C2N1119.2°118.4°
C2N1C8121.2°121.7°
N1C8N8117.7°121.8°
C8N8C1'117.2°120.6°
N8C1'C2'113.4°109.5°
N8C1'H1'108.2°109.4°
N8C1'H1'A107.3°109.5°
C1'C2'O2'111.5°109.5°
C1'C2'C3'107.4°109.5°
C2'C1'H1'108.2°109.5°
C2'C1'H1'A107.3°109.5°
C1'C2'H2'108.9°109.4°
O2'C2'C3'107.6°109.5°
O2'C2'H2'108.8°109.4°
C2'O2'HO2'109.5°113.9°
C2'C3'O3'104.7°109.5°
C2'C3'C4'113.9°109.5°
C3'C2'H2'112.7°109.5°
C2'C3'H3'109.3°109.4°
O3'C3'C4'107.9°109.5°
O3'C3'H3'115.1°109.5°
C3'O3'HO3'109.5°114.1°
C3'C4'O4'112.8°109.5°
C3'C4'C5'109.7°109.5°
C4'C3'H3'106.2°109.5°
C3'C4'H4'106.5°109.5°
O4'C4'C5'107.8°109.5°
O4'C4'H4'108.4°109.5°
C4'O4'HO4'109.5°114.0°
C4'C5'O5'105.6°109.5°
C5'C4'H4'111.6°109.4°
C4'C5'H5'110.8°109.5°
C4'C5'H5'A111.6°109.4°
O5'C5'H5'110.8°109.5°
O5'C5'H5'A111.6°109.4°
C5'O5'HO5'109.5°114.0°
H7C7H7A109.5°109.5°
H7C7H7B109.4°109.4°
H7AC7H7B109.5°109.5°
H6C6H6A109.5°109.5°
H6C6H6B109.5°109.5°
H6AC6H6B109.5°109.5°
H1'C1'H1'A112.6°109.5°
H5'C5'H5'A106.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C7C7AC5AN8175.9°179.8°
C7C7AC5AC62.8°0.1°
C7C7AC5AN5177.1°180.0°
C7C7AN8C8179.6°179.8°
C7C7AN8C1'2.7°0.0°
C7AC7H7H7A120.0°120.0°
C7AC7H7H7B120.0°120.0°
C7AC7H7AH7B120.0°120.0°
C7AC5AC6N5179.9°179.9°
C7AC5AN5C4A2.1°0.1°
C5AC7AN8C83.8°0.5°
C5AC7AN8C1'178.5°179.8°
C5AC7AC7H757.6°84.8°
C5AC7AC7H7A62.4°155.2°
C5AC7AC7H7B177.6°35.2°
C7AC5AC6H6130.3°92.9°
C7AC5AC6H6A109.7°147.1°
C7AC5AC6H6B10.3°27.1°
N8C7AC5AC6178.7°179.7°
N8C7AC5AN51.2°0.2°
C7AN8C8C4A3.2°0.5°
C7AN8C8N1179.1°179.7°
C7AN8C8C1'177.8°179.7°
C7AN8C1'C2'100.2°85.7°
N8C7AC7H7118.1°95.4°
N8C7AC7H7A121.8°24.6°
N8C7AC7H7B1.8°144.6°
C7AN8C1'H1'139.8°34.2°
C7AN8C1'H1'A18.1°154.3°
C6C5AN5C4A178.0°180.0°
C5AC6H6H6A120.0°120.0°
C5AC6H6H6B120.0°119.9°
C5AC6H6AH6B120.0°119.9°
C5AN5C4AC4176.3°180.0°
C5AN5C4AC82.8°0.0°
N5C5AC6H649.6°87.0°
N5C5AC6H6A70.4°33.0°
N5C5AC6H6B169.6°153.0°
N5C4AC4C8179.1°180.0°
N5C4AC4O40.5°0.0°
N5C4AC4N3177.5°180.0°
N5C4AC8N1177.5°180.0°
N5C4AC8N80.1°0.3°
C4AC4O4N3178.1°180.0°
C4AC4N3C21.9°0.1°
C4C4AC8N13.3°0.0°
C4C4AC8N8179.0°179.7°
C4AC4N3HN3178.1°180.0°
C8C4AC4O4178.6°180.0°
C8C4AC4N33.4°0.0°
C4AC8N1C21.7°0.0°
C4AC8N1N8177.8°179.8°
C4AC8N8C1'179.0°179.8°
O4C4N3C2179.9°180.0°
O4C4N3HN30.1°0.0°
C4N3C2HN3180.0°179.9°
C4N3C2O2179.5°179.9°
C4N3C2N10.2°0.0°
N3C2O2N1179.6°180.0°
N3C2N1C80.0°0.0°
O2C2N1C8179.6°180.0°
O2C2N3HN30.5°0.0°
C2N1C8N8179.4°179.8°
N1C2N3HN3179.8°180.0°
N1C8N8C1'1.3°0.0°
C8N8C1'C2'77.6°94.6°
C8N8C1'H1'42.4°145.5°
C8N8C1'H1'A164.1°25.5°
N8C1'C2'H1'120.0°119.9°
N8C1'C2'H1'A118.3°120.0°
N8C1'C2'O2'57.6°65.9°
N8C1'C2'C3'175.3°174.1°
N8C1'H1'H1'A118.4°120.0°
N8C1'C2'H2'62.4°54.1°
C1'C2'O2'C3'117.5°120.1°
C1'C2'O2'H2'120.1°120.0°
C1'C2'C3'H2'120.0°120.0°
C1'C2'C3'O3'58.0°60.0°
C1'C2'C3'C4'175.7°180.0°
C2'C1'H1'H1'A118.4°120.0°
C1'C2'O2'HO2'47.3°55.3°
C1'C2'C3'H3'65.8°60.0°
O2'C2'C3'H2'119.9°120.0°
O2'C2'C3'O3'178.2°180.0°
O2'C2'C3'C4'64.2°60.0°
O2'C2'C1'H1'177.6°174.2°
O2'C2'C1'H1'A60.7°54.2°
O2'C2'C3'H3'54.3°60.1°
C2'C3'O3'C4'121.7°120.0°
C2'C3'O3'H3'120.0°119.9°
C2'C3'C4'H3'120.3°120.0°
C2'C3'C4'O4'68.5°60.0°
C2'C3'C4'C5'171.2°180.0°
C3'C2'C1'H1'64.7°54.1°
C3'C2'C1'H1'A57.0°65.9°
C3'C2'O2'HO2'164.8°64.8°
C2'C3'O3'HO3'166.6°60.0°
C2'C3'C4'H4'50.3°60.1°
O3'C3'C4'H3'123.9°120.1°
O3'C3'C4'O4'175.6°180.0°
O3'C3'C4'C5'55.4°60.0°
O3'C3'C2'H2'61.9°60.0°
O3'C3'C4'H4'65.5°59.9°
C3'C4'O4'C5'121.3°120.0°
C3'C4'O4'H4'117.7°120.1°
C3'C4'C5'H4'117.8°120.0°
C3'C4'C5'O5'165.6°175.0°
C4'C3'C2'H2'55.7°60.0°
C4'C3'O3'HO3'44.9°60.0°
C3'C4'O4'HO4'48.9°60.0°
C3'C4'C5'H5'45.6°55.0°
C3'C4'C5'H5'A73.0°65.0°
O4'C4'C5'H4'119.0°120.0°
O4'C4'C5'O5'71.2°64.9°
O4'C4'C3'H3'51.7°60.0°
O4'C4'C5'H5'168.8°175.0°
O4'C4'C5'H5'A50.2°55.0°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A121.5°119.9°
C5'C4'C3'H3'68.5°60.0°
C5'C4'O4'HO4'170.3°60.0°
C4'C5'H5'H5'A121.6°120.0°
C4'C5'O5'HO5'107.0°180.0°
O5'C5'C4'H4'47.7°55.0°
O5'C5'H5'H5'A121.5°120.0°
H7C7H7AH7B120.0°120.0°
H6C6H6AH6B120.0°120.1°
H1'C1'C2'H2'57.6°65.9°
H1'AC1'C2'H2'179.3°174.1°
H2'C2'O2'HO2'72.9°175.2°
H2'C2'C3'H3'174.2°180.0°
H3'C3'O3'HO3'73.4°180.0°
H3'C3'C4'H4'170.6°180.0°
H4'C4'O4'HO4'68.8°180.0°
H4'C4'C5'H5'72.2°65.0°
H4'C4'C5'H5'A169.2°175.0°
H5'C5'O5'HO5'133.0°60.0°
H5'AC5'O5'HO5'14.5°60.1°

222415

PDB entries from 2024-07-10

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