DLY
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.45Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.09Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| C | OXT | sing | 1.34Å | 1.33Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CB | HB2 | sing | 1.09Å | 1.09Å | |
| CB | HB3 | sing | 1.09Å | 1.09Å | |
| CG | CD | sing | 1.53Å | 1.53Å | |
| CG | HG2 | sing | 1.09Å | 1.09Å | |
| CG | HG3 | sing | 1.09Å | 1.09Å | |
| CD | CE | sing | 1.53Å | 1.53Å | |
| CD | HD2 | sing | 1.09Å | 1.09Å | |
| CD | HD3 | sing | 1.09Å | 1.09Å | |
| CE | NZ | sing | 1.47Å | 1.48Å | |
| CE | HE2 | sing | 1.09Å | 1.09Å | |
| CE | HE3 | sing | 1.09Å | 1.09Å | |
| NZ | HZ1 | sing | 1.01Å | 1.01Å | |
| NZ | HZ2 | sing | 1.01Å | 1.01Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 114.9° | 106.7° |
| CA | N | H2 | 112.2° | 106.8° |
| N | CA | C | 109.3° | 109.5° |
| N | CA | CB | 110.5° | 109.4° |
| N | CA | HA | 107.4° | 109.5° |
| H | N | H2 | 82.9° | 106.7° |
| C | CA | CB | 113.7° | 109.5° |
| C | CA | HA | 108.5° | 109.4° |
| CA | C | O | 120.5° | 120.0° |
| CA | C | OXT | 115.0° | 120.0° |
| CB | CA | HA | 107.2° | 109.4° |
| CA | CB | CG | 111.1° | 109.5° |
| CA | CB | HB2 | 109.7° | 109.5° |
| CA | CB | HB3 | 109.7° | 109.5° |
| O | C | OXT | 124.4° | 120.0° |
| C | OXT | HXT | 115.0° | 120.0° |
| CG | CB | HB2 | 109.7° | 109.4° |
| CG | CB | HB3 | 109.7° | 109.5° |
| CB | CG | CD | 111.0° | 109.6° |
| CB | CG | HG2 | 109.7° | 109.4° |
| CB | CG | HG3 | 109.6° | 109.5° |
| HB2 | CB | HB3 | 107.0° | 109.4° |
| CD | CG | HG2 | 109.7° | 109.4° |
| CD | CG | HG3 | 109.7° | 109.5° |
| CG | CD | CE | 111.0° | 109.6° |
| CG | CD | HD2 | 109.7° | 109.4° |
| CG | CD | HD3 | 109.6° | 109.5° |
| HG2 | CG | HG3 | 107.0° | 109.5° |
| CE | CD | HD2 | 109.7° | 109.4° |
| CE | CD | HD3 | 109.8° | 109.5° |
| CD | CE | NZ | 110.4° | 109.5° |
| CD | CE | HE2 | 109.8° | 109.4° |
| CD | CE | HE3 | 109.8° | 109.5° |
| HD2 | CD | HD3 | 107.0° | 109.4° |
| NZ | CE | HE2 | 109.9° | 109.4° |
| NZ | CE | HE3 | 109.9° | 109.4° |
| CE | NZ | HZ1 | 112.1° | 106.8° |
| CE | NZ | HZ2 | 112.0° | 106.7° |
| HE2 | CE | HE3 | 107.0° | 109.5° |
| HZ1 | NZ | HZ2 | 106.8° | 106.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 111.3° | 113.9° |
| N | CA | C | CB | 124.0° | 120.0° |
| N | CA | C | HA | 116.8° | 120.0° |
| N | CA | CB | HA | 116.7° | 120.0° |
| N | CA | C | O | 48.8° | 30.0° |
| N | CA | C | OXT | 131.2° | 150.1° |
| N | CA | CB | CG | 36.2° | 60.0° |
| N | CA | CB | HB2 | 85.1° | 60.0° |
| N | CA | CB | HB3 | 157.6° | 180.0° |
| H | N | CA | C | 37.7° | 53.8° |
| H | N | CA | CB | 88.1° | 173.8° |
| H | N | CA | HA | 155.2° | 66.2° |
| H2 | N | CA | C | 54.7° | 60.0° |
| H2 | N | CA | CB | 179.5° | 60.0° |
| H2 | N | CA | HA | 62.8° | 180.0° |
| C | CA | CB | HA | 119.9° | 120.0° |
| CA | C | O | OXT | 179.9° | 179.9° |
| C | CA | CB | CG | 159.6° | 180.0° |
| C | CA | CB | HB2 | 38.2° | 60.0° |
| C | CA | CB | HB3 | 79.0° | 60.0° |
| CA | C | OXT | HXT | 180.0° | 179.9° |
| CB | CA | C | O | 75.2° | 89.9° |
| CB | CA | C | OXT | 104.9° | 90.0° |
| CA | CB | CG | HB2 | 121.4° | 120.0° |
| CA | CB | CG | HB3 | 121.4° | 120.1° |
| CA | CB | HB2 | HB3 | 118.9° | 120.0° |
| CA | CB | CG | CD | 85.0° | 180.0° |
| CA | CB | CG | HG2 | 153.6° | 60.0° |
| CA | CB | CG | HG3 | 36.4° | 59.9° |
| HA | CA | C | O | 165.6° | 150.1° |
| HA | CA | C | OXT | 14.4° | 30.0° |
| HA | CA | CB | CG | 80.5° | 60.0° |
| HA | CA | CB | HB2 | 158.1° | 180.0° |
| HA | CA | CB | HB3 | 40.9° | 60.0° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| CG | CB | HB2 | HB3 | 118.9° | 119.9° |
| CB | CG | CD | HG2 | 121.4° | 120.0° |
| CB | CG | CD | HG3 | 121.3° | 120.1° |
| CB | CG | HG2 | HG3 | 118.8° | 120.0° |
| CB | CG | CD | CE | 152.3° | 180.0° |
| CB | CG | CD | HD2 | 30.9° | 60.0° |
| CB | CG | CD | HD3 | 86.3° | 59.9° |
| HB2 | CB | CG | CD | 36.4° | 60.0° |
| HB2 | CB | CG | HG2 | 85.0° | 180.0° |
| HB2 | CB | CG | HG3 | 157.8° | 60.1° |
| HB3 | CB | CG | CD | 153.6° | 59.9° |
| HB3 | CB | CG | HG2 | 32.2° | 60.1° |
| HB3 | CB | CG | HG3 | 85.0° | 180.0° |
| CD | CG | HG2 | HG3 | 119.0° | 120.0° |
| CG | CD | CE | HD2 | 121.3° | 120.0° |
| CG | CD | CE | HD3 | 121.4° | 120.1° |
| CG | CD | HD2 | HD3 | 118.8° | 120.0° |
| CG | CD | CE | NZ | 102.9° | 180.0° |
| CG | CD | CE | HE2 | 18.4° | 60.0° |
| CG | CD | CE | HE3 | 135.8° | 60.0° |
| HG2 | CG | CD | CE | 86.3° | 60.0° |
| HG2 | CG | CD | HD2 | 152.3° | 180.0° |
| HG2 | CG | CD | HD3 | 35.2° | 60.0° |
| HG3 | CG | CD | CE | 31.0° | 59.9° |
| HG3 | CG | CD | HD2 | 90.4° | 60.1° |
| HG3 | CG | CD | HD3 | 152.4° | 180.0° |
| CE | CD | HD2 | HD3 | 119.0° | 119.9° |
| CD | CE | NZ | HE2 | 121.3° | 120.0° |
| CD | CE | NZ | HE3 | 121.2° | 120.0° |
| CD | CE | HE2 | HE3 | 119.1° | 120.0° |
| CD | CE | NZ | HZ1 | 62.2° | 180.0° |
| CD | CE | NZ | HZ2 | 57.9° | 66.2° |
| HD2 | CD | CE | NZ | 135.7° | 60.0° |
| HD2 | CD | CE | HE2 | 102.9° | 179.9° |
| HD2 | CD | CE | HE3 | 14.5° | 60.0° |
| HD3 | CD | CE | NZ | 18.4° | 59.9° |
| HD3 | CD | CE | HE2 | 139.8° | 60.1° |
| HD3 | CD | CE | HE3 | 102.8° | 179.9° |
| NZ | CE | HE2 | HE3 | 119.3° | 119.9° |
| CE | NZ | HZ1 | HZ2 | 123.1° | 113.8° |
| HE2 | CE | NZ | HZ1 | 176.5° | 60.0° |
| HE2 | CE | NZ | HZ2 | 63.4° | 53.7° |
| HE3 | CE | NZ | HZ1 | 59.0° | 60.0° |
| HE3 | CE | NZ | HZ2 | 179.1° | 173.7° |
