Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

Obsolete: DLD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O4AC4Asing1.43Å1.45Å
C6AO6Asing1.43Å1.43Å
C6AC5Asing1.53Å1.53Å
C4AC5Asing1.53Å1.53Å
C4AC3Asing1.53Å1.51Å
C5AO5Asing1.43Å1.45Å
O3AC3Asing1.43Å1.42Å
O5AC1Asing1.43Å1.44Å
C3AC2Asing1.53Å1.52Å
O3BC3Bsing1.43Å1.43Å
C2AC1Asing1.53Å1.52Å
C2AN2Asing1.46Å1.51Å
C1AO4Bsing1.43Å1.39Å
O7AC7Adoub1.21Å1.33Å
O4BC4Bsing1.43Å1.47Å
N2AC7Asing1.35Å1.33Å
C3BC4Bsing1.53Å1.52Å
C3BC2Bsing1.53Å1.55Å
C7AC8Asing1.51Å1.47Å
C4BC5Bsing1.53Å1.53Å
O7BC7Bdoub1.21Å1.26Å
N2BC7Bsing1.35Å1.41Å
N2BC2Bsing1.47Å1.46Å
C7BC8Bsing1.51Å1.45Å
C2BC1Bsing1.53Å1.53Å
C5BC6Bsing1.53Å1.51Å
C5BO5Bsing1.43Å1.45Å
C6BO6Bsing1.43Å1.40Å
C1BO5Bsing1.43Å1.41Å
C1BO11sing1.43Å1.42Å
O11C12sing1.43Å1.44Å
C12C13sing1.53Å1.53Å
C13N14sing1.47Å1.50Å
N14N15doub1.12Å1.57Å
N15N16doub1.12Å1.61Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C1AH1Asing1.09Å1.10Å
C1BH1Bsing1.09Å1.10Å
C2AH2Asing1.09Å1.10Å
N2AHN2Asing0.97Å1.00Å
C2BH2Bsing1.09Å1.10Å
N2BHN2Bsing0.97Å1.00Å
C3AH3Asing1.09Å1.10Å
O3AHO3Asing0.97Å0.95Å
C3BH3Bsing1.09Å1.10Å
O3BHO3Bsing0.97Å0.95Å
C4AH4Asing1.09Å1.10Å
O4AHO4Asing0.97Å0.95Å
C4BH4Bsing1.09Å1.10Å
C5AH5Asing1.09Å1.10Å
C5BH5Bsing1.09Å1.10Å
C6AH6Asing1.09Å1.10Å
C6AH6AAsing1.09Å1.10Å
O6AHO6Asing0.97Å0.95Å
C6BH6Bsing1.09Å1.10Å
C6BH6BAsing1.09Å1.10Å
O6BHO6Bsing0.97Å0.95Å
C8AH8Asing1.09Å1.10Å
C8AH8AAsing1.09Å1.10Å
C8AH8ABsing1.09Å1.10Å
C8BH8Bsing1.09Å1.10Å
C8BH8BAsing1.09Å1.10Å
C8BH8BBsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O4AC4AC5A112.5°109.5°
O4AC4AC3A108.7°109.6°
O4AC4AH4A110.0°109.6°
C4AO4AHO4A109.5°114.0°
O6AC6AC5A114.5°109.5°
O6AC6AH6A108.2°109.5°
O6AC6AH6AA108.2°109.5°
C6AO6AHO6A109.5°114.0°
C6AC5AC4A114.4°109.5°
C6AC5AO5A110.8°109.5°
C6AC5AH5A106.5°109.5°
C5AC6AH6A108.2°109.4°
C5AC6AH6AA108.2°109.4°
C5AC4AC3A107.5°109.2°
C4AC5AO5A110.7°109.4°
C5AC4AH4A108.9°109.5°
C4AC5AH5A106.5°109.5°
C4AC3AO3A111.2°109.6°
C4AC3AC2A107.6°109.0°
C4AC3AH3A109.8°109.6°
C3AC4AH4A109.1°109.5°
C5AO5AC1A112.1°114.1°
O5AC5AH5A107.4°109.4°
O3AC3AC2A107.3°109.5°
O3AC3AH3A111.2°109.6°
C3AO3AHO3A109.5°114.0°
O5AC1AC2A109.4°109.5°
O5AC1AO4B111.6°109.5°
O5AC1AH1A109.4°109.5°
C3AC2AC1A109.0°109.1°
C3AC2AN2A106.5°109.5°
C3AC2AH2A108.2°109.6°
C2AC3AH3A109.7°109.6°
O3BC3BC4B107.7°109.5°
O3BC3BC2B111.0°109.5°
O3BC3BH3B109.3°109.6°
C3BO3BHO3B109.5°114.0°
C1AC2AN2A116.3°109.6°
C2AC1AO4B108.0°109.5°
C2AC1AH1A108.3°109.5°
C1AC2AH2A108.2°109.5°
C2AN2AC7A121.5°120.0°
N2AC2AH2A108.4°109.6°
C2AN2AHN2A119.2°120.1°
C1AO4BC4B120.9°114.0°
O4BC1AH1A110.1°109.4°
O7AC7AN2A124.5°120.0°
O7AC7AC8A120.1°120.0°
O4BC4BC3B107.4°109.6°
O4BC4BC5B108.1°109.5°
O4BC4BH4B109.9°109.6°
N2AC7AC8A115.3°120.0°
C7AN2AHN2A119.3°119.9°
C4BC3BC2B112.7°109.0°
C3BC4BC5B113.1°109.1°
C4BC3BH3B108.1°109.6°
C3BC4BH4B109.2°109.5°
C3BC2BN2B107.1°109.5°
C3BC2BC1B110.8°109.1°
C3BC2BH2B109.8°109.5°
C2BC3BH3B107.9°109.6°
C7AC8AH8A109.5°109.5°
C7AC8AH8AA109.4°109.5°
C7AC8AH8AB109.4°109.5°
C4BC5BC6B111.7°109.5°
C4BC5BO5B113.2°109.4°
C5BC4BH4B109.1°109.5°
C4BC5BH5B108.4°109.5°
O7BC7BN2B125.9°120.1°
O7BC7BC8B113.0°120.0°
C7BN2BC2B123.6°119.9°
N2BC7BC8B121.1°119.9°
C7BN2BHN2B118.2°120.1°
N2BC2BC1B108.2°109.6°
N2BC2BH2B110.9°109.6°
C2BN2BHN2B118.2°120.0°
C7BC8BH8B109.5°109.4°
C7BC8BH8BA109.5°109.5°
C7BC8BH8BB109.5°109.5°
C2BC1BO5B110.6°109.4°
C2BC1BO11108.8°109.4°
C2BC1BH1B109.1°109.5°
C1BC2BH2B110.0°109.5°
C6BC5BO5B105.5°109.4°
C5BC6BO6B109.7°109.5°
C6BC5BH5B108.5°109.5°
C5BC6BH6B109.4°109.4°
C5BC6BH6BA109.4°109.5°
C5BO5BC1B113.6°114.1°
O5BC5BH5B109.4°109.5°
O6BC6BH6B109.4°109.5°
O6BC6BH6BA109.4°109.5°
C6BO6BHO6B109.5°114.0°
O5BC1BO11106.9°109.5°
O5BC1BH1B110.8°109.5°
C1BO11C12115.6°114.0°
O11C1BH1B110.7°109.5°
O11C12C13107.1°109.5°
O11C12H12110.1°109.5°
O11C12H12A110.0°109.5°
C12C13N14109.6°109.5°
C13C12H12110.0°109.5°
C13C12H12A110.1°109.4°
C12C13H13109.5°109.5°
C12C13H13A109.5°109.5°
C13N14N15105.2°119.9°
N14C13H13109.4°109.5°
N14C13H13A109.4°109.5°
N14N15N16163.1°180.0°
H12C12H12A109.5°109.5°
H13C13H13A109.5°109.5°
H6AC6AH6AA109.5°109.5°
H6BC6BH6BA109.5°109.5°
H8AC8AH8AA109.5°109.4°
H8AC8AH8AB109.4°109.5°
H8AAC8AH8AB109.5°109.4°
H8BC8BH8BA109.5°109.4°
H8BC8BH8BB109.5°109.5°
H8BAC8BH8BB109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O4AC4AC5AC6A66.5°57.7°
O4AC4AC5AC3A119.6°119.9°
O4AC4AC5AH4A122.3°120.2°
O4AC4AC3AH4A120.0°120.2°
O4AC4AC5AO5A59.6°62.3°
O4AC4AC3AO3A55.8°57.0°
O4AC4AC3AC2A61.4°62.9°
O4AC4AC3AH3A179.2°177.2°
O4AC4AC5AH5A176.1°177.8°
O6AC6AC5AH6A120.7°120.0°
O6AC6AC5AH6AA120.7°120.0°
O6AC6AC5AC4A166.4°175.0°
O6AC6AC5AO5A40.3°65.0°
O6AC6AC5AH5A76.2°54.9°
O6AC6AH6AH6AA117.7°120.1°
C6AC5AC4AO5A126.1°120.0°
C6AC5AC4AH5A117.4°120.1°
C6AC5AC4AC3A173.9°177.6°
C6AC5AO5AH5A115.9°120.0°
C6AC5AO5AC1A171.8°178.9°
C6AC5AC4AH4A55.8°62.5°
C5AC6AH6AH6AA117.7°119.9°
C5AC6AO6AHO6A180.0°180.0°
C5AC4AC3AH4A118.0°119.9°
C4AC5AO5AH5A116.0°120.0°
C5AC4AC3AO3A177.7°176.9°
C4AC5AO5AC1A60.0°61.1°
C5AC4AC3AC2A60.6°57.0°
C5AC4AC3AH3A58.8°62.9°
C5AC4AO4AHO4A180.0°60.0°
C4AC5AC6AH6A45.6°55.0°
C4AC5AC6AH6AA72.9°65.0°
C3AC4AC5AO5A60.0°57.6°
C4AC3AO3AC2A117.4°119.6°
C4AC3AO3AH3A122.7°120.2°
C4AC3AC2AH3A119.4°119.9°
C4AC3AC2AC1A61.3°57.0°
C4AC3AC2AN2A172.5°176.9°
C4AC3AC2AH2A56.1°62.9°
C4AC3AO3AHO3A180.0°60.4°
C3AC4AO4AHO4A61.1°179.7°
C3AC4AC5AH5A56.5°62.3°
C5AO5AC1AC2A59.1°61.1°
C5AO5AC1AO4B178.6°178.9°
C5AO5AC1AH1A59.4°58.9°
O5AC5AC4AH4A178.1°177.5°
O5AC5AC6AH6A80.4°175.0°
O5AC5AC6AH6AA161.0°55.0°
O3AC3AC2AH3A120.9°120.2°
O3AC3AC2AC1A179.0°176.9°
O3AC3AC2AN2A52.8°63.2°
O3AC3AC2AH2A63.6°57.0°
O3AC3AC4AH4A64.3°63.2°
O5AC1AC2AC3A59.7°57.6°
O5AC1AC2AO4B121.6°120.0°
O5AC1AC2AH1A119.2°120.1°
O5AC1AC2AN2A179.9°177.5°
O5AC1AO4BH1A121.7°120.0°
O5AC1AO4BC4B76.9°70.2°
O5AC1AC2AH2A57.7°62.3°
C1AO5AC5AH5A55.9°58.9°
C3AC2AC1AN2A120.4°119.9°
C3AC2AC1AH2A117.4°119.9°
C3AC2AN2AH2A116.2°120.2°
C3AC2AC1AO4B178.6°177.6°
C3AC2AN2AC7A141.1°155.3°
C3AC2AC1AH1A59.5°62.4°
C3AC2AN2AHN2A38.9°24.7°
C2AC3AO3AHO3A62.6°180.0°
C2AC3AC4AH4A178.6°176.9°
O3BC3BC4BO4B76.3°63.3°
O3BC3BC4BC2B122.8°119.8°
O3BC3BC4BH3B118.0°120.3°
O3BC3BC2BH3B119.8°120.3°
O3BC3BC4BC5B164.6°176.8°
O3BC3BC2BN2B74.1°63.3°
O3BC3BC2BC1B168.1°176.8°
O3BC3BC2BH2B46.5°56.9°
O3BC3BC4BH4B42.9°57.0°
C1AC2AN2AH2A122.1°120.2°
C2AC1AO4BH1A118.0°120.0°
C2AC1AO4BC4B162.8°169.9°
C1AC2AN2AC7A97.2°85.0°
C1AC2AN2AHN2A82.8°94.9°
C1AC2AC3AH3A58.1°62.9°
N2AC2AC1AO4B58.3°62.5°
C2AN2AC7AO7A0.7°0.0°
C2AN2AC7AHN2A180.0°180.0°
C2AN2AC7AC8A179.1°180.0°
N2AC2AC1AH1A60.9°57.5°
N2AC2AC3AH3A68.1°57.0°
C1AO4BC4BC3B139.1°139.6°
C1AO4BC4BC5B98.6°100.8°
O4BC1AC2AH2A63.9°57.7°
C1AO4BC4BH4B20.3°19.4°
O7AC7AN2AC8A179.8°180.0°
O7AC7AN2AHN2A179.3°180.0°
O7AC7AC8AH8A0.0°180.0°
O7AC7AC8AH8AA120.0°60.0°
O7AC7AC8AH8AB120.0°60.0°
O4BC4BC3BC5B119.1°119.9°
O4BC4BC3BH4B119.2°120.3°
O4BC4BC3BC2B160.9°176.9°
O4BC4BC5BH4B119.5°120.2°
O4BC4BC5BC6B77.3°62.5°
O4BC4BC5BO5B163.8°177.6°
C4BO4BC1AH1A44.7°49.8°
O4BC4BC3BH3B41.7°57.0°
O4BC4BC5BH5B42.2°57.5°
C7AN2AC2AH2A24.9°35.1°
N2AC7AC8AH8A179.8°0.0°
N2AC7AC8AH8AA59.8°120.0°
N2AC7AC8AH8AB60.2°120.0°
C4BC3BC2BH3B119.3°119.9°
C3BC4BC5BH4B121.7°119.8°
C4BC3BC2BN2B165.0°176.9°
C4BC3BC2BC1B47.2°57.0°
C3BC4BC5BC6B163.9°177.5°
C3BC4BC5BO5B45.0°57.6°
C4BC3BC2BH2B74.4°62.9°
C4BC3BO3BHO3B180.0°180.0°
C3BC4BC5BH5B76.5°62.4°
C2BC3BC4BC5B41.8°57.0°
C3BC2BN2BC7B139.9°155.4°
C3BC2BN2BC1B119.5°119.7°
C3BC2BN2BH2B119.8°120.1°
C3BC2BC1BH2B121.6°119.9°
C3BC2BC1BO5B56.9°57.6°
C3BC2BC1BO11174.0°177.6°
C3BC2BC1BH1B65.2°62.4°
C3BC2BN2BHN2B40.1°24.7°
C2BC3BO3BHO3B56.3°60.5°
C2BC3BC4BH4B79.9°62.8°
C8AC7AN2AHN2A0.9°0.0°
C7AC8AH8AH8AA120.0°120.0°
C7AC8AH8AH8AB120.0°120.0°
C7AC8AH8AAH8AB120.0°120.0°
C4BC5BC6BO5B123.4°119.9°
C4BC5BC6BH5B119.4°120.1°
C4BC5BO5BH5B121.0°120.0°
C4BC5BC6BO6B161.0°174.7°
C4BC5BO5BC1B56.2°61.2°
C5BC4BC3BH3B77.4°62.9°
C4BC5BC6BH6B40.9°54.8°
C4BC5BC6BH6BA79.0°65.2°
O7BC7BN2BC8B179.9°179.9°
O7BC7BN2BC2B179.8°0.1°
O7BC7BN2BHN2B0.3°180.0°
O7BC7BC8BH8B0.0°90.0°
O7BC7BC8BH8BA120.0°29.9°
O7BC7BC8BH8BB120.0°149.9°
C7BN2BC2BHN2B180.0°179.9°
C7BN2BC2BC1B100.6°85.0°
C7BN2BC2BH2B20.1°35.2°
N2BC7BC8BH8B179.9°90.1°
N2BC7BC8BH8BA59.9°150.0°
N2BC7BC8BH8BB60.1°30.0°
C2BN2BC7BC8B0.1°180.0°
N2BC2BC1BH2B121.3°120.2°
N2BC2BC1BO5B174.0°177.5°
N2BC2BC1BO1168.9°62.5°
N2BC2BC1BH1B51.9°57.5°
N2BC2BC3BH3B45.7°57.0°
C8BC7BN2BHN2B179.9°0.1°
C7BC8BH8BH8BA120.0°119.9°
C7BC8BH8BH8BB120.0°120.1°
C7BC8BH8BAH8BB120.0°120.1°
C2BC1BO5BC5B62.0°61.2°
C2BC1BO5BO11118.3°119.9°
C2BC1BO5BH1B121.0°120.0°
C2BC1BO11H1B119.8°120.0°
C2BC1BO11C12179.5°175.0°
C1BC2BN2BHN2B79.4°95.0°
C1BC2BC3BH3B72.1°62.9°
C6BC5BO5BH5B116.6°120.0°
C5BC6BO6BH6B120.0°119.9°
C5BC6BO6BH6BA120.0°120.1°
C6BC5BO5BC1B178.6°178.9°
C6BC5BC4BH4B42.2°57.7°
C5BC6BH6BH6BA119.9°120.0°
C5BC6BO6BHO6B180.0°180.0°
O5BC5BC6BO6B75.6°65.3°
C5BO5BC1BO11179.7°178.9°
C5BO5BC1BH1B59.0°58.8°
O5BC5BC4BH4B76.7°62.2°
O5BC5BC6BH6B164.3°174.7°
O5BC5BC6BH6BA44.4°54.8°
O6BC6BC5BH5B41.6°54.7°
O6BC6BH6BH6BA119.9°120.0°
O5BC1BO11H1B120.7°120.1°
O5BC1BO11C1261.0°65.0°
O5BC1BC2BH2B64.7°62.2°
C1BO5BC5BH5B64.7°58.8°
C1BO11C12C13172.4°180.0°
C1BO11C12H1268.0°60.0°
C1BO11C12H12A52.7°60.0°
O11C1BC2BH2B52.4°57.7°
O11C12C13H12119.7°120.0°
O11C12C13H12A119.6°120.0°
O11C12C13N1486.0°65.0°
O11C12H12H12A121.1°120.0°
O11C12C13H1334.0°175.0°
O11C12C13H13A154.0°55.0°
C12O11C1BH1B59.7°55.0°
C12C13N14H13120.0°120.0°
C12C13N14H13A120.0°120.0°
C12C13N14N1568.8°120.0°
C13C12H12H12A121.1°120.0°
C12C13H13H13A120.0°120.0°
C13N14N15N16177.6°141.9°
N14C13C12H12154.4°55.0°
N14C13C12H12A33.6°175.0°
N14C13H13H13A119.9°120.0°
N15N14C13H13171.2°0.0°
N15N14C13H13A51.2°120.0°
H12C12C13H1385.6°65.0°
H12C12C13H13A34.4°175.0°
H12AC12C13H13153.7°55.0°
H12AC12C13H13A86.4°65.0°
H1AC1AC2AH2A176.9°177.6°
H1BC1BC2BH2B173.2°177.7°
H2AC2AN2AHN2A155.1°144.9°
H2AC2AC3AH3A175.5°177.2°
H2BC2BN2BHN2B159.9°144.9°
H2BC2BC3BH3B166.3°177.2°
H3AC3AO3AHO3A57.3°59.8°
H3AC3AC4AH4A59.2°57.0°
H3BC3BO3BHO3B62.7°59.7°
H3BC3BC4BH4B160.9°177.2°
H4AC4AO4AHO4A58.4°60.1°
H4AC4AC5AH5A61.6°57.6°
H4BC4BC5BH5B161.7°177.8°
H5AC5AC6AH6A163.0°65.1°
H5AC5AC6AH6AA44.5°174.9°
H5BC5BC6BH6B78.5°65.2°
H5BC5BC6BH6BA161.6°174.8°
H6AC6AO6AHO6A59.3°60.1°
H6AAC6AO6AHO6A59.3°60.0°
H6BC6BO6BHO6B60.0°60.0°
H6BAC6BO6BHO6B60.0°60.0°
H8AC8AH8AAH8AB120.0°120.0°
H8BC8BH8BAH8BB120.0°120.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon