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DK6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C4sing1.53Å1.53Å
C5C6sing1.53Å1.55Å
O3C4sing1.43Å1.40Å
C4O4sing1.43Å1.43Å
O3H1sing0.97Å0.95Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
O4H4sing0.97Å0.95Å
C6H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4C5C6117.7°109.5°
C5C4O3107.3°109.5°
C5C4O4112.4°109.5°
C4C5H2107.4°109.4°
C4C5H3107.4°109.4°
C5C4H8108.7°109.5°
C6C5H2107.4°109.5°
C6C5H3107.4°109.5°
C5C6H5109.5°109.4°
C5C6H6109.5°109.4°
C5C6H7109.4°109.5°
O3C4O4108.1°109.5°
C4O3H1109.5°114.0°
O3C4H8110.4°109.4°
C4O4H4109.5°114.0°
O4C4H8110.1°109.5°
H2C5H3109.5°109.5°
H5C6H6109.5°109.5°
H5C6H7109.5°109.5°
H6C6H7109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4C5C6H2121.2°120.0°
C4C5C6H3121.2°120.0°
C5C4O3O4121.4°120.0°
C5C4O3H8118.2°120.0°
C5C4O4H8121.2°120.0°
C5C4O3H1180.0°60.0°
C4C5H2H3116.3°119.9°
C5C4O4H4180.0°180.0°
C4C5C6H5180.0°60.0°
C4C5C6H660.0°60.0°
C4C5C6H760.0°180.0°
C6C5C4O385.1°65.0°
C6C5C4O433.5°175.0°
C6C5H2H3116.3°120.0°
C5C6H5H6120.0°119.9°
C5C6H5H7120.0°120.0°
C5C6H6H7120.0°120.0°
C6C5C4H8155.6°54.9°
O3C4O4H8120.6°120.0°
O3C4C5H2153.7°55.1°
O3C4C5H336.0°175.0°
O3C4O4H461.8°60.0°
O4C4O3H158.6°60.0°
O4C4C5H287.6°65.0°
O4C4C5H3154.7°55.0°
H1O3C4H861.8°180.0°
H2C5C6H558.8°180.0°
H2C5C6H6178.8°60.0°
H2C5C6H761.2°60.0°
H2C5C4H834.4°175.0°
H3C5C6H558.8°60.0°
H3C5C6H661.2°180.0°
H3C5C6H7178.8°60.0°
H3C5C4H883.3°65.1°
H4O4C4H858.8°60.0°
H5C6H6H7120.0°120.1°

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PDB entries from 2024-07-10

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