DIY
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.47Å | 1.46Å | |
N1 | C6 | sing | 1.47Å | 1.45Å | |
N1 | HN1 | sing | 1.01Å | 1.02Å | |
C2 | C3 | sing | 1.53Å | 1.52Å | |
C2 | H21 | sing | 1.09Å | 1.11Å | |
C2 | H22 | sing | 1.09Å | 1.11Å | |
C6 | C5 | sing | 1.53Å | 1.49Å | |
C6 | H61 | sing | 1.09Å | 1.12Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
C3 | C4 | sing | 1.53Å | 1.52Å | |
C3 | H31 | sing | 1.09Å | 1.11Å | |
C3 | H32 | sing | 1.09Å | 1.11Å | |
C4 | C5 | sing | 1.53Å | 1.54Å | |
C4 | H41 | sing | 1.09Å | 1.11Å | |
C4 | H42 | sing | 1.09Å | 1.11Å | |
C5 | C1' | sing | 1.53Å | 1.51Å | |
C5 | H5 | sing | 1.09Å | 1.11Å | |
C1' | C2' | sing | 1.53Å | 1.51Å | |
C1' | H1'1 | sing | 1.09Å | 1.11Å | |
C1' | H1'2 | sing | 1.09Å | 1.12Å | |
C2' | C3' | sing | 1.53Å | 1.50Å | |
C2' | H2'1 | sing | 1.09Å | 1.12Å | |
C2' | H2'2 | sing | 1.09Å | 1.11Å | |
C3' | C4' | sing | 1.53Å | 1.50Å | |
C3' | H3'1 | sing | 1.09Å | 1.11Å | |
C3' | H3'2 | sing | 1.09Å | 1.11Å | |
C4' | H4'1 | sing | 1.09Å | 1.12Å | |
C4' | H4'2 | sing | 1.09Å | 1.12Å | |
C4' | H4'3 | sing | 1.09Å | 1.11Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C6 | 115.9° | 107.4° |
C2 | N1 | HN1 | 109.9° | 106.7° |
N1 | C2 | C3 | 104.8° | 109.8° |
N1 | C2 | H21 | 113.9° | 109.4° |
N1 | C2 | H22 | 113.9° | 109.5° |
C6 | N1 | HN1 | 109.8° | 106.7° |
N1 | C6 | C5 | 109.2° | 109.8° |
N1 | C6 | H61 | 112.2° | 109.4° |
N1 | C6 | H62 | 112.3° | 109.4° |
C3 | C2 | H21 | 114.0° | 109.4° |
C3 | C2 | H22 | 114.0° | 109.4° |
C2 | C3 | C4 | 109.3° | 109.2° |
C2 | C3 | H31 | 112.3° | 109.6° |
C2 | C3 | H32 | 112.2° | 109.4° |
H21 | C2 | H22 | 96.5° | 109.4° |
C5 | C6 | H61 | 112.3° | 109.5° |
C5 | C6 | H62 | 112.3° | 109.3° |
C6 | C5 | C4 | 107.3° | 109.2° |
C6 | C5 | C1' | 112.4° | 109.6° |
C6 | C5 | H5 | 111.2° | 109.5° |
H61 | C6 | H62 | 98.1° | 109.3° |
C4 | C3 | H31 | 112.3° | 109.6° |
C4 | C3 | H32 | 112.3° | 109.5° |
C3 | C4 | C5 | 116.9° | 109.0° |
C3 | C4 | H41 | 109.5° | 109.5° |
C3 | C4 | H42 | 109.5° | 109.6° |
H31 | C3 | H32 | 98.1° | 109.5° |
C5 | C4 | H41 | 109.5° | 109.5° |
C5 | C4 | H42 | 109.5° | 109.6° |
C4 | C5 | C1' | 115.1° | 109.5° |
C4 | C5 | H5 | 108.2° | 109.5° |
H41 | C4 | H42 | 100.7° | 109.6° |
C1' | C5 | H5 | 102.6° | 109.5° |
C5 | C1' | C2' | 108.5° | 109.5° |
C5 | C1' | H1'1 | 112.6° | 109.4° |
C5 | C1' | H1'2 | 112.6° | 109.5° |
C2' | C1' | H1'1 | 112.6° | 109.5° |
C2' | C1' | H1'2 | 112.6° | 109.5° |
C1' | C2' | C3' | 111.5° | 109.5° |
C1' | C2' | H2'1 | 111.4° | 109.5° |
C1' | C2' | H2'2 | 111.4° | 109.5° |
H1'1 | C1' | H1'2 | 97.8° | 109.5° |
C3' | C2' | H2'1 | 111.4° | 109.4° |
C3' | C2' | H2'2 | 111.5° | 109.5° |
C2' | C3' | C4' | 106.5° | 109.6° |
C2' | C3' | H3'1 | 113.3° | 109.5° |
C2' | C3' | H3'2 | 113.3° | 109.5° |
H2'1 | C2' | H2'2 | 98.9° | 109.4° |
C4' | C3' | H3'1 | 113.3° | 109.5° |
C4' | C3' | H3'2 | 113.3° | 109.5° |
C3' | C4' | H4'1 | 106.6° | 109.6° |
C3' | C4' | H4'2 | 113.3° | 109.5° |
C3' | C4' | H4'3 | 113.4° | 109.5° |
H3'1 | C3' | H3'2 | 97.2° | 109.4° |
H4'1 | C4' | H4'2 | 113.3° | 109.5° |
H4'1 | C4' | H4'3 | 113.3° | 109.4° |
H4'2 | C4' | H4'3 | 97.1° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | N1 | C6 | HN1 | 125.3° | 114.1° |
N1 | C2 | C3 | H21 | 125.2° | 120.0° |
N1 | C2 | C3 | H22 | 125.2° | 120.1° |
N1 | C2 | H21 | H22 | 119.8° | 119.9° |
C2 | N1 | C6 | C5 | 66.8° | 65.5° |
C2 | N1 | C6 | H61 | 168.0° | 174.2° |
C2 | N1 | C6 | H62 | 58.5° | 54.5° |
N1 | C2 | C3 | C4 | 54.5° | 61.3° |
N1 | C2 | C3 | H31 | 179.8° | 178.7° |
N1 | C2 | C3 | H32 | 70.8° | 58.6° |
C6 | N1 | C2 | C3 | 66.3° | 65.6° |
C6 | N1 | C2 | H21 | 59.0° | 54.5° |
C6 | N1 | C2 | H22 | 168.4° | 174.3° |
N1 | C6 | C5 | H61 | 125.2° | 120.2° |
N1 | C6 | C5 | H62 | 125.3° | 120.1° |
N1 | C6 | H61 | H62 | 118.2° | 119.8° |
N1 | C6 | C5 | C4 | 51.8° | 61.2° |
N1 | C6 | C5 | C1' | 75.7° | 178.8° |
N1 | C6 | C5 | H5 | 169.9° | 58.6° |
HN1 | N1 | C2 | C3 | 168.4° | 179.7° |
HN1 | N1 | C2 | H21 | 66.3° | 59.7° |
HN1 | N1 | C2 | H22 | 43.2° | 60.2° |
HN1 | N1 | C6 | C5 | 167.9° | 179.6° |
HN1 | N1 | C6 | H61 | 42.7° | 60.1° |
HN1 | N1 | C6 | H62 | 66.7° | 59.6° |
C3 | C2 | H21 | H22 | 119.9° | 119.8° |
C2 | C3 | C4 | H31 | 125.3° | 120.0° |
C2 | C3 | C4 | H32 | 125.2° | 119.8° |
C2 | C3 | H31 | H32 | 118.2° | 120.1° |
C2 | C3 | C4 | C5 | 52.3° | 55.5° |
C2 | C3 | C4 | H41 | 73.0° | 64.3° |
C2 | C3 | C4 | H42 | 177.5° | 175.4° |
H21 | C2 | C3 | C4 | 70.7° | 58.7° |
H21 | C2 | C3 | H31 | 54.6° | 61.3° |
H21 | C2 | C3 | H32 | 164.0° | 178.6° |
H22 | C2 | C3 | C4 | 179.7° | 178.5° |
H22 | C2 | C3 | H31 | 55.0° | 58.5° |
H22 | C2 | C3 | H32 | 54.5° | 61.6° |
C5 | C6 | H61 | H62 | 118.3° | 119.7° |
C6 | C5 | C4 | C3 | 49.4° | 55.5° |
C6 | C5 | C4 | C1' | 125.9° | 120.1° |
C6 | C5 | C4 | H5 | 120.0° | 119.9° |
C6 | C5 | C4 | H41 | 75.8° | 64.3° |
C6 | C5 | C4 | H42 | 174.6° | 175.4° |
C6 | C5 | C1' | H5 | 119.5° | 120.1° |
C6 | C5 | C1' | C2' | 176.5° | 60.1° |
C6 | C5 | C1' | H1'1 | 58.2° | 59.9° |
C6 | C5 | C1' | H1'2 | 51.2° | 179.9° |
H61 | C6 | C5 | C4 | 177.0° | 178.6° |
H61 | C6 | C5 | C1' | 49.5° | 58.6° |
H61 | C6 | C5 | H5 | 64.9° | 61.6° |
H62 | C6 | C5 | C4 | 73.5° | 58.8° |
H62 | C6 | C5 | C1' | 159.0° | 61.2° |
H62 | C6 | C5 | H5 | 44.6° | 178.7° |
C4 | C3 | H31 | H32 | 118.2° | 120.1° |
C3 | C4 | C5 | H41 | 125.2° | 119.8° |
C3 | C4 | C5 | H42 | 125.2° | 119.9° |
C3 | C4 | H41 | H42 | 115.3° | 120.3° |
C3 | C4 | C5 | C1' | 76.5° | 175.5° |
C3 | C4 | C5 | H5 | 169.4° | 64.4° |
H31 | C3 | C4 | C5 | 177.6° | 175.5° |
H31 | C3 | C4 | H41 | 52.3° | 55.7° |
H31 | C3 | C4 | H42 | 57.2° | 64.6° |
H32 | C3 | C4 | C5 | 73.0° | 64.3° |
H32 | C3 | C4 | H41 | 161.8° | 175.9° |
H32 | C3 | C4 | H42 | 52.3° | 55.6° |
C5 | C4 | H41 | H42 | 115.3° | 120.3° |
C4 | C5 | C1' | H5 | 117.3° | 120.0° |
C4 | C5 | C1' | C2' | 60.3° | 179.9° |
C4 | C5 | C1' | H1'1 | 65.0° | 60.0° |
C4 | C5 | C1' | H1'2 | 174.4° | 60.1° |
H41 | C4 | C5 | C1' | 158.3° | 55.7° |
H41 | C4 | C5 | H5 | 44.2° | 175.8° |
H42 | C4 | C5 | C1' | 48.7° | 64.6° |
H42 | C4 | C5 | H5 | 65.3° | 55.4° |
C5 | C1' | C2' | H1'1 | 125.3° | 119.9° |
C5 | C1' | C2' | H1'2 | 125.3° | 120.0° |
C5 | C1' | H1'1 | H1'2 | 118.5° | 120.0° |
C5 | C1' | C2' | C3' | 161.9° | 180.0° |
C5 | C1' | C2' | H2'1 | 72.9° | 60.1° |
C5 | C1' | C2' | H2'2 | 36.6° | 59.9° |
H5 | C5 | C1' | C2' | 57.0° | 60.1° |
H5 | C5 | C1' | H1'1 | 177.7° | 180.0° |
H5 | C5 | C1' | H1'2 | 68.3° | 60.0° |
C2' | C1' | H1'1 | H1'2 | 118.5° | 120.0° |
C1' | C2' | C3' | H2'1 | 125.3° | 120.0° |
C1' | C2' | C3' | H2'2 | 125.2° | 120.1° |
C1' | C2' | H2'1 | H2'2 | 117.3° | 120.0° |
C1' | C2' | C3' | C4' | 62.1° | 180.0° |
C1' | C2' | C3' | H3'1 | 172.6° | 60.0° |
C1' | C2' | C3' | H3'2 | 63.1° | 59.9° |
H1'1 | C1' | C2' | C3' | 36.6° | 60.0° |
H1'1 | C1' | C2' | H2'1 | 161.8° | 180.0° |
H1'1 | C1' | C2' | H2'2 | 88.7° | 60.0° |
H1'2 | C1' | C2' | C3' | 72.8° | 60.0° |
H1'2 | C1' | C2' | H2'1 | 52.4° | 60.0° |
H1'2 | C1' | C2' | H2'2 | 161.9° | 180.0° |
C3' | C2' | H2'1 | H2'2 | 117.4° | 120.0° |
C2' | C3' | C4' | H3'1 | 125.3° | 120.1° |
C2' | C3' | C4' | H3'2 | 125.3° | 120.1° |
C2' | C3' | H3'1 | H3'2 | 119.3° | 120.0° |
C2' | C3' | C4' | H4'1 | 180.0° | 180.0° |
C2' | C3' | C4' | H4'2 | 54.8° | 60.0° |
C2' | C3' | C4' | H4'3 | 54.7° | 60.0° |
H2'1 | C2' | C3' | C4' | 63.1° | 60.0° |
H2'1 | C2' | C3' | H3'1 | 62.1° | 180.0° |
H2'1 | C2' | C3' | H3'2 | 171.7° | 60.1° |
H2'2 | C2' | C3' | C4' | 172.6° | 59.9° |
H2'2 | C2' | C3' | H3'1 | 47.4° | 60.1° |
H2'2 | C2' | C3' | H3'2 | 62.2° | 180.0° |
C4' | C3' | H3'1 | H3'2 | 119.2° | 119.9° |
C3' | C4' | H4'1 | H4'2 | 125.3° | 120.1° |
C3' | C4' | H4'1 | H4'3 | 125.3° | 120.0° |
C3' | C4' | H4'2 | H4'3 | 119.3° | 120.0° |
H3'1 | C3' | C4' | H4'1 | 54.7° | 60.0° |
H3'1 | C3' | C4' | H4'2 | 180.0° | 60.1° |
H3'1 | C3' | C4' | H4'3 | 70.5° | 180.0° |
H3'2 | C3' | C4' | H4'1 | 54.7° | 59.9° |
H3'2 | C3' | C4' | H4'2 | 70.5° | 179.9° |
H3'2 | C3' | C4' | H4'3 | 180.0° | 60.1° |
H4'1 | C4' | H4'2 | H4'3 | 119.2° | 119.9° |