DIL
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.50Å | |
N | H | sing | 1.01Å | 1.03Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | C | sing | 1.51Å | 1.57Å | |
CA | CB | sing | 1.53Å | 1.57Å | |
CA | HA | sing | 1.09Å | 1.11Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.35Å | |
CB | CG1 | sing | 1.53Å | 1.56Å | |
CB | CG2 | sing | 1.53Å | 1.55Å | |
CB | HB | sing | 1.09Å | 1.11Å | |
CG1 | CD1 | sing | 1.53Å | 1.54Å | |
CG1 | HG12 | sing | 1.09Å | 1.11Å | |
CG1 | HG13 | sing | 1.09Å | 1.11Å | |
CG2 | HG21 | sing | 1.09Å | 1.10Å | |
CG2 | HG22 | sing | 1.09Å | 1.11Å | |
CG2 | HG23 | sing | 1.09Å | 1.11Å | |
CD1 | HD11 | sing | 1.09Å | 1.10Å | |
CD1 | HD12 | sing | 1.09Å | 1.11Å | |
CD1 | HD13 | sing | 1.09Å | 1.11Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 121.4° | 106.7° |
CA | N | H2 | 109.9° | 106.7° |
N | CA | C | 115.8° | 109.4° |
N | CA | CB | 110.4° | 109.5° |
N | CA | HA | 104.7° | 109.5° |
H | N | H2 | 125.4° | 106.7° |
C | CA | CB | 114.8° | 109.5° |
C | CA | HA | 104.5° | 109.5° |
CA | C | O | 118.3° | 120.0° |
CA | C | OXT | 119.5° | 120.0° |
CB | CA | HA | 105.2° | 109.5° |
CA | CB | CG1 | 112.1° | 109.5° |
CA | CB | CG2 | 114.6° | 109.4° |
CA | CB | HB | 106.7° | 109.5° |
O | C | OXT | 122.3° | 120.0° |
C | OXT | HXT | 119.5° | 120.0° |
CG1 | CB | CG2 | 111.1° | 109.5° |
CG1 | CB | HB | 105.5° | 109.5° |
CB | CG1 | CD1 | 115.8° | 109.6° |
CB | CG1 | HG12 | 110.2° | 109.5° |
CB | CG1 | HG13 | 109.4° | 109.4° |
CG2 | CB | HB | 106.2° | 109.4° |
CB | CG2 | HG21 | 112.2° | 109.5° |
CB | CG2 | HG22 | 112.0° | 109.5° |
CB | CG2 | HG23 | 111.9° | 109.4° |
CD1 | CG1 | HG12 | 109.1° | 109.5° |
CD1 | CG1 | HG13 | 107.0° | 109.4° |
CG1 | CD1 | HD11 | 112.1° | 109.6° |
CG1 | CD1 | HD12 | 111.0° | 109.5° |
CG1 | CD1 | HD13 | 111.7° | 109.5° |
HG12 | CG1 | HG13 | 104.8° | 109.5° |
HG21 | CG2 | HG22 | 106.9° | 109.5° |
HG21 | CG2 | HG23 | 106.4° | 109.5° |
HG22 | CG2 | HG23 | 107.2° | 109.5° |
HD11 | CD1 | HD12 | 107.0° | 109.4° |
HD11 | CD1 | HD13 | 107.6° | 109.5° |
HD12 | CD1 | HD13 | 107.2° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 157.4° | 113.8° |
N | CA | C | CB | 130.6° | 120.0° |
N | CA | C | HA | 114.7° | 120.0° |
N | CA | CB | HA | 112.5° | 120.0° |
N | CA | C | O | 147.9° | 30.0° |
N | CA | C | OXT | 32.5° | 150.0° |
N | CA | CB | CG1 | 156.8° | 60.0° |
N | CA | CB | CG2 | 75.4° | 180.0° |
N | CA | CB | HB | 41.8° | 60.1° |
H | N | CA | C | 105.8° | 53.8° |
H | N | CA | CB | 26.8° | 173.8° |
H | N | CA | HA | 139.6° | 66.2° |
H2 | N | CA | C | 54.7° | 60.0° |
H2 | N | CA | CB | 172.6° | 60.0° |
H2 | N | CA | HA | 59.9° | 180.0° |
C | CA | CB | HA | 114.3° | 120.0° |
CA | C | O | OXT | 179.6° | 180.0° |
C | CA | CB | CG1 | 70.1° | 180.0° |
C | CA | CB | CG2 | 57.7° | 60.0° |
C | CA | CB | HB | 175.0° | 59.9° |
CA | C | OXT | HXT | 180.0° | 180.0° |
CB | CA | C | O | 81.5° | 90.0° |
CB | CA | C | OXT | 98.1° | 90.0° |
CA | CB | CG1 | CG2 | 129.6° | 120.0° |
CA | CB | CG1 | HB | 115.7° | 120.1° |
CA | CB | CG2 | HB | 117.5° | 120.0° |
CA | CB | CG1 | CD1 | 164.2° | 180.0° |
CA | CB | CG1 | HG12 | 71.4° | 60.0° |
CA | CB | CG1 | HG13 | 43.3° | 60.0° |
CA | CB | CG2 | HG21 | 48.8° | 60.0° |
CA | CB | CG2 | HG22 | 71.4° | 60.0° |
CA | CB | CG2 | HG23 | 168.2° | 180.0° |
HA | CA | C | O | 33.2° | 150.0° |
HA | CA | C | OXT | 147.2° | 30.0° |
HA | CA | CB | CG1 | 44.3° | 60.0° |
HA | CA | CB | CG2 | 172.1° | 60.0° |
HA | CA | CB | HB | 70.7° | 180.0° |
O | C | OXT | HXT | 0.4° | 0.0° |
CG1 | CB | CG2 | HB | 114.2° | 120.0° |
CB | CG1 | CD1 | HG12 | 125.0° | 120.1° |
CB | CG1 | CD1 | HG13 | 122.2° | 120.0° |
CB | CG1 | HG12 | HG13 | 117.6° | 120.0° |
CG1 | CB | CG2 | HG21 | 177.1° | 60.0° |
CG1 | CB | CG2 | HG22 | 56.9° | 179.9° |
CG1 | CB | CG2 | HG23 | 63.4° | 60.0° |
CB | CG1 | CD1 | HD11 | 64.1° | 180.0° |
CB | CG1 | CD1 | HD12 | 176.3° | 60.0° |
CB | CG1 | CD1 | HD13 | 56.8° | 59.9° |
CG2 | CB | CG1 | CD1 | 66.2° | 60.0° |
CG2 | CB | CG1 | HG12 | 58.2° | 60.0° |
CG2 | CB | CG1 | HG13 | 172.9° | 180.0° |
CB | CG2 | HG21 | HG22 | 123.1° | 120.0° |
CB | CG2 | HG21 | HG23 | 122.6° | 119.9° |
CB | CG2 | HG22 | HG23 | 123.1° | 120.0° |
HB | CB | CG1 | CD1 | 48.5° | 59.9° |
HB | CB | CG1 | HG12 | 172.9° | 180.0° |
HB | CB | CG1 | HG13 | 72.4° | 60.1° |
HB | CB | CG2 | HG21 | 68.7° | 180.0° |
HB | CB | CG2 | HG22 | 171.1° | 60.0° |
HB | CB | CG2 | HG23 | 50.8° | 60.0° |
CD1 | CG1 | HG12 | HG13 | 114.3° | 119.9° |
CG1 | CD1 | HD11 | HD12 | 121.9° | 120.0° |
CG1 | CD1 | HD11 | HD13 | 123.1° | 120.1° |
CG1 | CD1 | HD12 | HD13 | 122.2° | 120.0° |
HG12 | CG1 | CD1 | HD11 | 60.9° | 60.0° |
HG12 | CG1 | CD1 | HD12 | 58.7° | 60.0° |
HG12 | CG1 | CD1 | HD13 | 178.3° | 180.0° |
HG13 | CG1 | CD1 | HD11 | 173.8° | 60.0° |
HG13 | CG1 | CD1 | HD12 | 54.2° | 180.0° |
HG13 | CG1 | CD1 | HD13 | 65.4° | 60.1° |
HG21 | CG2 | HG22 | HG23 | 113.7° | 120.0° |
HD11 | CD1 | HD12 | HD13 | 115.2° | 119.9° |