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DI8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OCdoub1.21Å1.34Å
OXTCsing1.34Å1.23Å
CCAsing1.51Å1.40Å
CANsing1.47Å1.49Å
NC8sing1.47Å1.49Å
NHsing1.01Å1.00Å
OXTHXTsing0.97Å0.95Å
CAC1sing1.53Å1.54Å
C1C2sing1.51Å1.36Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C2C7doub1.38Å1.41ÅAromatic
C2C3sing1.39Å1.38ÅAromatic
C3C4doub1.38Å1.39ÅAromatic
C3H3sing1.08Å1.08Å
C4C5sing1.38Å1.39ÅAromatic
C4H4sing1.08Å1.08Å
C6C5doub1.38Å1.39ÅAromatic
C5H5sing1.08Å1.08Å
C7C6sing1.39Å1.40ÅAromatic
C6H6sing1.08Å1.08Å
C8C7sing1.51Å1.41Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
CAHAsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCOXT123.2°120.0°
OCCA117.0°120.0°
OXTCCA119.8°120.0°
COXTHXT109.5°117.0°
CCAN107.3°109.6°
CCAC1116.1°109.7°
CCAHA109.0°109.6°
CANC8118.1°110.2°
CANH107.3°111.0°
NCAC1109.2°108.5°
NCAHA107.8°109.6°
C8NH107.3°111.0°
NC8C7112.6°110.5°
NC8H8108.7°109.3°
NC8H8A108.7°109.3°
CAC1C2106.9°110.0°
CAC1H1110.1°109.4°
CAC1H1A110.1°109.3°
C1CAHA107.3°109.8°
C2C1H1110.1°109.4°
C2C1H1A110.1°109.4°
C1C2C7121.1°121.6°
C1C2C3119.1°118.5°
H1C1H1A109.5°109.4°
C7C2C3119.8°119.9°
C2C7C6120.3°119.7°
C2C7C8121.8°121.8°
C2C3C4119.4°120.4°
C2C3H3120.3°119.8°
C4C3H3120.3°119.8°
C3C4C5121.2°119.8°
C3C4H4119.4°120.1°
C5C4H4119.4°120.1°
C4C5C6119.6°119.8°
C4C5H5120.2°120.1°
C6C5H5120.2°120.1°
C5C6C7119.7°120.4°
C5C6H6120.1°119.8°
C7C6H6120.2°119.8°
C6C7C8117.9°118.4°
C7C8H8108.7°109.3°
C7C8H8A108.7°109.2°
H8C8H8A109.5°109.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCOXTCA176.9°179.7°
OCCAN166.0°20.0°
OCOXTHXT0.0°0.3°
OCCAC143.6°99.0°
OCCAHA77.6°140.4°
OXTCCAN16.9°160.3°
OXTCCAC1139.3°80.7°
OXTCCAHA99.5°39.9°
CCANC1126.6°119.7°
CCANHA117.2°120.4°
CCANC888.7°169.0°
CCANH150.1°45.7°
CACOXTHXT176.9°180.0°
CCAC1HA122.1°120.5°
CCAC1C260.9°170.1°
CCAC1H158.6°69.7°
CCAC1H1A179.5°50.0°
CANC8H121.2°123.4°
NCAC1HA116.5°119.8°
NCAC1C260.4°50.5°
NCAC1H1180.0°170.6°
NCAC1H1A59.2°69.7°
CANC8C73.0°52.6°
CANC8H8117.4°67.7°
CANC8H8A123.5°172.8°
C8NCAC137.9°71.3°
NC8C7C224.0°17.7°
NC8C7C6155.1°162.7°
NC8C7H8120.5°120.3°
NC8C7H8A120.4°120.2°
NC8H8H8A118.6°119.5°
C8NCAHA154.2°48.6°
HNCAC183.3°165.4°
HNC8C7124.3°176.0°
HNC8H83.8°55.6°
HNC8H8A115.3°63.8°
HNCAHA32.9°74.7°
CAC1C2H1119.6°120.1°
CAC1C2H1A119.6°120.1°
CAC1H1H1A121.2°119.7°
CAC1C2C744.7°17.1°
CAC1C2C3136.9°163.0°
C2C1H1H1A121.2°119.8°
C1C2C7C3178.4°179.9°
C1C2C3C4178.7°179.8°
C1C2C3H31.4°0.3°
C1C2C7C6179.0°179.7°
C1C2C7C81.8°0.7°
C2C1CAHA177.0°69.3°
H1C1C2C7164.3°137.2°
H1C1C2C317.3°42.9°
H1C1CAHA63.5°50.8°
H1AC1C2C774.9°103.0°
H1AC1C2C3103.5°76.9°
H1AC1CAHA57.4°170.5°
C7C2C3C40.2°0.1°
C7C2C3H3179.8°179.8°
C2C7C6C50.5°0.1°
C2C7C6C8179.2°179.6°
C2C7C6H6179.5°179.8°
C2C7C8H896.4°102.6°
C2C7C8H8A144.5°138.0°
C2C3C4H3180.0°180.0°
C2C3C4C50.3°0.1°
C2C3C4H4179.7°180.0°
C3C2C7C60.6°0.2°
C3C2C7C8179.8°179.4°
C3C4C5H4180.0°179.9°
C3C4C5C60.4°0.2°
C3C4C5H5179.6°179.9°
H3C3C4C5179.7°180.0°
H3C3C4H40.3°0.0°
C4C5C6H5180.0°179.9°
C4C5C6C70.1°0.1°
C4C5C6H6179.9°180.0°
H4C4C5C6179.7°179.9°
H4C4C5H50.3°0.0°
C5C6C7H6180.0°179.9°
C5C6C7C8179.7°179.5°
H5C5C6C7179.9°180.0°
H5C5C6H60.1°0.1°
C6C7C8H884.4°77.0°
C6C7C8H8A34.7°42.4°
H6C6C7C80.3°0.6°
C7C8H8H8A118.6°119.5°

246704

PDB entries from 2025-12-24

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