DHZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.34Å | 1.39Å | |
| N1 | C6 | sing | 1.39Å | 1.36Å | |
| N1 | C1' | sing | 1.46Å | 1.62Å | |
| C2 | O2 | doub | 1.22Å | 1.23Å | |
| C2 | N3 | sing | 1.35Å | 1.39Å | |
| N3 | C4 | sing | 1.47Å | 1.55Å | |
| N3 | HN3 | sing | 0.97Å | 1.02Å | |
| C4 | C5 | sing | 1.51Å | 1.53Å | |
| C4 | H41 | sing | 1.09Å | 1.12Å | |
| C4 | H42 | sing | 1.09Å | 1.11Å | |
| C5 | C6 | doub | 1.32Å | 1.35Å | |
| C5 | H5 | sing | 1.08Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.10Å | |
| C1' | C2' | sing | 1.55Å | 1.48Å | |
| C1' | O4' | sing | 1.44Å | 1.43Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| C2' | O2' | sing | 1.43Å | 1.45Å | |
| C2' | C3' | sing | 1.55Å | 1.49Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO2 | sing | 0.97Å | 0.95Å | |
| C3' | O3' | sing | 1.43Å | 1.41Å | |
| C3' | C4' | sing | 1.54Å | 1.63Å | |
| C3' | H3' | sing | 1.09Å | 1.11Å | |
| O3' | HO3 | sing | 0.97Å | 0.95Å | |
| C4' | O4' | sing | 1.44Å | 1.48Å | |
| C4' | C5' | sing | 1.53Å | 1.46Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| C5' | O5' | sing | 1.43Å | 1.46Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| O5' | HO5 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 124.8° | 123.3° |
| C2 | N1 | C1' | 117.5° | 118.3° |
| N1 | C2 | O2 | 122.6° | 119.1° |
| N1 | C2 | N3 | 116.3° | 121.8° |
| C6 | N1 | C1' | 116.9° | 118.4° |
| N1 | C6 | C5 | 122.0° | 121.3° |
| N1 | C6 | H6 | 119.4° | 119.3° |
| N1 | C1' | C2' | 134.4° | 110.8° |
| N1 | C1' | O4' | 102.9° | 110.6° |
| N1 | C1' | H1' | 96.6° | 110.5° |
| O2 | C2 | N3 | 121.1° | 119.1° |
| C2 | N3 | C4 | 123.5° | 118.3° |
| C2 | N3 | HN3 | 112.6° | 120.9° |
| C4 | N3 | HN3 | 124.0° | 120.8° |
| N3 | C4 | C5 | 109.5° | 117.1° |
| N3 | C4 | H41 | 112.2° | 107.9° |
| N3 | C4 | H42 | 112.2° | 107.8° |
| C5 | C4 | H41 | 112.2° | 108.0° |
| C5 | C4 | H42 | 112.2° | 108.0° |
| C4 | C5 | C6 | 121.4° | 118.1° |
| C4 | C5 | H5 | 125.5° | 120.9° |
| H41 | C4 | H42 | 98.2° | 107.7° |
| C6 | C5 | H5 | 113.1° | 121.0° |
| C5 | C6 | H6 | 118.6° | 119.4° |
| C2' | C1' | O4' | 110.7° | 103.5° |
| C2' | C1' | H1' | 85.5° | 110.6° |
| C1' | C2' | O2' | 109.8° | 110.9° |
| C1' | C2' | C3' | 106.6° | 102.1° |
| C1' | C2' | H2' | 115.0° | 110.9° |
| O4' | C1' | H1' | 129.3° | 110.6° |
| C1' | O4' | C4' | 108.1° | 106.9° |
| O2' | C2' | C3' | 118.8° | 110.9° |
| O2' | C2' | H2' | 101.6° | 110.9° |
| C2' | O2' | HO2 | 109.8° | 106.8° |
| C3' | C2' | H2' | 105.2° | 111.0° |
| C2' | C3' | O3' | 104.2° | 110.5° |
| C2' | C3' | C4' | 101.1° | 104.1° |
| C2' | C3' | H3' | 118.3° | 110.5° |
| O3' | C3' | C4' | 111.2° | 110.8° |
| O3' | C3' | H3' | 109.4° | 110.4° |
| C3' | O3' | HO3 | 104.1° | 106.8° |
| C4' | C3' | H3' | 112.1° | 110.4° |
| C3' | C4' | O4' | 105.2° | 107.4° |
| C3' | C4' | C5' | 119.5° | 109.9° |
| C3' | C4' | H4' | 104.0° | 109.9° |
| O4' | C4' | C5' | 103.6° | 109.9° |
| O4' | C4' | H4' | 119.9° | 109.8° |
| C5' | C4' | H4' | 105.6° | 109.9° |
| C4' | C5' | O5' | 105.2° | 109.5° |
| C4' | C5' | H5'1 | 113.8° | 109.5° |
| C4' | C5' | H5'2 | 113.8° | 109.5° |
| O5' | C5' | H5'1 | 113.8° | 109.4° |
| O5' | C5' | H5'2 | 113.8° | 109.4° |
| C5' | O5' | HO5 | 105.3° | 106.9° |
| H5'1 | C5' | H5'2 | 96.6° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | C1' | 170.1° | 179.8° |
| N1 | C2 | O2 | N3 | 176.8° | 179.5° |
| N1 | C2 | N3 | C4 | 12.5° | 0.5° |
| N1 | C2 | N3 | HN3 | 167.5° | 179.7° |
| C2 | N1 | C6 | C5 | 3.9° | 0.2° |
| C2 | N1 | C6 | H6 | 176.0° | 179.7° |
| C2 | N1 | C1' | C2' | 108.6° | 55.9° |
| C2 | N1 | C1' | O4' | 114.5° | 58.3° |
| C2 | N1 | C1' | H1' | 18.4° | 178.8° |
| C6 | N1 | C2 | O2 | 177.0° | 180.0° |
| C6 | N1 | C2 | N3 | 0.1° | 0.5° |
| N1 | C6 | C5 | C4 | 4.6° | 0.1° |
| N1 | C6 | C5 | H6 | 180.0° | 179.9° |
| N1 | C6 | C5 | H5 | 175.4° | 180.0° |
| C6 | N1 | C1' | C2' | 80.6° | 124.4° |
| C6 | N1 | C1' | O4' | 56.4° | 121.4° |
| C6 | N1 | C1' | H1' | 170.7° | 1.4° |
| C1' | N1 | C2 | O2 | 12.9° | 0.2° |
| C1' | N1 | C2 | N3 | 170.1° | 179.7° |
| C1' | N1 | C6 | C5 | 166.2° | 180.0° |
| C1' | N1 | C6 | H6 | 13.9° | 0.0° |
| N1 | C1' | C2' | O4' | 134.7° | 118.6° |
| N1 | C1' | C2' | H1' | 94.8° | 122.9° |
| N1 | C1' | O4' | H1' | 109.9° | 122.8° |
| N1 | C1' | C2' | O2' | 73.1° | 86.2° |
| N1 | C1' | C2' | C3' | 156.9° | 155.7° |
| N1 | C1' | C2' | H2' | 40.8° | 37.5° |
| N1 | C1' | O4' | C4' | 153.2° | 158.7° |
| O2 | C2 | N3 | C4 | 170.5° | 180.0° |
| O2 | C2 | N3 | HN3 | 9.5° | 0.2° |
| C2 | N3 | C4 | HN3 | 180.0° | 179.8° |
| C2 | N3 | C4 | C5 | 18.8° | 0.2° |
| C2 | N3 | C4 | H41 | 144.0° | 122.2° |
| C2 | N3 | C4 | H42 | 106.5° | 121.7° |
| N3 | C4 | C5 | H41 | 125.3° | 122.0° |
| N3 | C4 | C5 | H42 | 125.3° | 121.8° |
| N3 | C4 | H41 | H42 | 118.1° | 116.1° |
| N3 | C4 | C5 | C6 | 14.4° | 0.1° |
| N3 | C4 | C5 | H5 | 165.6° | 180.0° |
| HN3 | N3 | C4 | C5 | 161.2° | 180.0° |
| HN3 | N3 | C4 | H41 | 36.0° | 58.0° |
| HN3 | N3 | C4 | H42 | 73.5° | 58.1° |
| C5 | C4 | H41 | H42 | 118.1° | 116.4° |
| C4 | C5 | C6 | H5 | 180.0° | 180.0° |
| C4 | C5 | C6 | H6 | 175.5° | 180.0° |
| H41 | C4 | C5 | C6 | 139.6° | 121.9° |
| H41 | C4 | C5 | H5 | 40.4° | 58.0° |
| H42 | C4 | C5 | C6 | 110.9° | 121.9° |
| H42 | C4 | C5 | H5 | 69.1° | 58.1° |
| H5 | C5 | C6 | H6 | 4.5° | 0.0° |
| C2' | C1' | O4' | H1' | 101.6° | 118.5° |
| C1' | C2' | O2' | C3' | 123.1° | 112.6° |
| C1' | C2' | O2' | H2' | 122.2° | 123.7° |
| C1' | C2' | C3' | H2' | 122.5° | 118.2° |
| C1' | C2' | O2' | HO2 | 180.0° | 180.0° |
| C1' | C2' | C3' | O3' | 87.4° | 98.0° |
| C1' | C2' | C3' | C4' | 28.1° | 21.0° |
| C1' | C2' | C3' | H3' | 150.9° | 139.5° |
| C2' | C1' | O4' | C4' | 4.6° | 40.0° |
| O4' | C1' | C2' | O2' | 152.2° | 155.2° |
| O4' | C1' | C2' | C3' | 22.2° | 37.1° |
| O4' | C1' | C2' | H2' | 93.9° | 81.1° |
| C1' | O4' | C4' | C3' | 13.3° | 26.4° |
| C1' | O4' | C4' | C5' | 113.0° | 145.9° |
| C1' | O4' | C4' | H4' | 129.7° | 93.1° |
| H1' | C1' | C2' | O2' | 21.7° | 36.7° |
| H1' | C1' | C2' | C3' | 108.3° | 81.4° |
| H1' | C1' | C2' | H2' | 135.6° | 160.4° |
| H1' | C1' | O4' | C4' | 97.0° | 78.5° |
| O2' | C2' | C3' | H2' | 112.8° | 123.7° |
| O2' | C2' | C3' | O3' | 37.3° | 20.1° |
| O2' | C2' | C3' | C4' | 152.7° | 139.2° |
| O2' | C2' | C3' | H3' | 84.5° | 102.3° |
| C3' | C2' | O2' | HO2 | 57.0° | 67.3° |
| C2' | C3' | O3' | C4' | 108.1° | 114.8° |
| C2' | C3' | O3' | H3' | 127.5° | 122.5° |
| C2' | C3' | C4' | H3' | 127.0° | 118.6° |
| C2' | C3' | O3' | HO3 | 180.0° | 180.0° |
| C2' | C3' | C4' | O4' | 25.5° | 1.9° |
| C2' | C3' | C4' | C5' | 90.3° | 121.4° |
| C2' | C3' | C4' | H4' | 152.3° | 117.6° |
| H2' | C2' | O2' | HO2 | 57.8° | 56.4° |
| H2' | C2' | C3' | O3' | 150.1° | 143.8° |
| H2' | C2' | C3' | C4' | 94.5° | 97.2° |
| H2' | C2' | C3' | H3' | 28.3° | 21.3° |
| O3' | C3' | C4' | H3' | 122.9° | 122.7° |
| O3' | C3' | C4' | O4' | 84.6° | 120.6° |
| O3' | C3' | C4' | C5' | 159.6° | 119.8° |
| O3' | C3' | C4' | H4' | 42.2° | 1.2° |
| C4' | C3' | O3' | HO3 | 71.9° | 65.2° |
| C3' | C4' | O4' | C5' | 126.3° | 119.5° |
| C3' | C4' | O4' | H4' | 116.5° | 119.5° |
| C3' | C4' | C5' | H4' | 116.6° | 121.1° |
| C3' | C4' | C5' | O5' | 34.4° | 179.7° |
| C3' | C4' | C5' | H5'1 | 159.7° | 59.7° |
| C3' | C4' | C5' | H5'2 | 90.9° | 60.3° |
| H3' | C3' | O3' | HO3 | 52.5° | 57.5° |
| H3' | C3' | C4' | O4' | 152.5° | 116.7° |
| H3' | C3' | C4' | C5' | 36.7° | 2.8° |
| H3' | C3' | C4' | H4' | 80.7° | 123.9° |
| O4' | C4' | C5' | H4' | 126.8° | 120.9° |
| O4' | C4' | C5' | O5' | 82.1° | 61.7° |
| O4' | C4' | C5' | H5'1 | 43.1° | 58.3° |
| O4' | C4' | C5' | H5'2 | 152.6° | 178.4° |
| C4' | C5' | O5' | H5'1 | 125.3° | 120.0° |
| C4' | C5' | O5' | H5'2 | 125.3° | 120.0° |
| C4' | C5' | H5'1 | H5'2 | 119.7° | 120.0° |
| C4' | C5' | O5' | HO5 | 180.0° | 180.0° |
| H4' | C4' | C5' | O5' | 151.0° | 59.3° |
| H4' | C4' | C5' | H5'1 | 83.7° | 179.2° |
| H4' | C4' | C5' | H5'2 | 25.7° | 60.7° |
| O5' | C5' | H5'1 | H5'2 | 119.7° | 120.0° |
| H5'1 | C5' | O5' | HO5 | 54.7° | 60.0° |
| H5'2 | C5' | O5' | HO5 | 54.7° | 60.0° |
