DG6
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O1 | sing | 1.43Å | 1.42Å | |
C1 | C2 | sing | 1.53Å | 1.64Å | |
C1 | HC11 | sing | 1.09Å | 1.10Å | |
C1 | HC12 | sing | 1.09Å | 1.10Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
C2 | C3 | sing | 1.53Å | 1.64Å | |
C2 | HC21 | sing | 1.09Å | 1.10Å | |
C2 | HC22 | sing | 1.09Å | 1.10Å | |
C3 | O3 | sing | 1.43Å | 1.43Å | |
C3 | C4 | sing | 1.53Å | 1.62Å | |
C3 | HC3 | sing | 1.09Å | 1.10Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.43Å | 1.49Å | |
C4 | C5 | sing | 1.53Å | 1.63Å | |
C4 | HC4 | sing | 1.09Å | 1.10Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | O5 | sing | 1.43Å | 1.45Å | |
C5 | C6 | sing | 1.53Å | 1.65Å | |
C5 | HC5 | sing | 1.09Å | 1.10Å | |
O5 | HO5 | sing | 0.97Å | 0.95Å | |
C6 | O6 | sing | 1.43Å | 1.51Å | |
C6 | HC61 | sing | 1.09Å | 1.10Å | |
C6 | HC62 | sing | 1.09Å | 1.10Å | |
O6 | P | sing | 1.61Å | 1.82Å | |
P | O1P | sing | 1.61Å | 1.38Å | |
P | O2P | sing | 1.61Å | 1.42Å | |
P | O3P | doub | 1.48Å | 1.39Å | |
O1P | H1P | sing | 0.97Å | 0.95Å | |
O2P | H2P | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | C2 | 111.1° | 109.5° |
O1 | C1 | HC11 | 108.6° | 109.4° |
O1 | C1 | HC12 | 108.9° | 109.5° |
C1 | O1 | HO1 | 109.5° | 106.7° |
C2 | C1 | HC11 | 108.6° | 109.5° |
C2 | C1 | HC12 | 108.9° | 109.5° |
C1 | C2 | C3 | 111.4° | 109.5° |
C1 | C2 | HC21 | 108.4° | 109.5° |
C1 | C2 | HC22 | 108.8° | 109.5° |
HC11 | C1 | HC12 | 110.7° | 109.5° |
C3 | C2 | HC21 | 108.4° | 109.5° |
C3 | C2 | HC22 | 108.8° | 109.4° |
C2 | C3 | O3 | 112.7° | 109.5° |
C2 | C3 | C4 | 110.4° | 109.5° |
C2 | C3 | HC3 | 106.5° | 109.5° |
HC21 | C2 | HC22 | 111.0° | 109.4° |
O3 | C3 | C4 | 109.3° | 109.4° |
O3 | C3 | HC3 | 107.7° | 109.4° |
C3 | O3 | HO3 | 109.5° | 106.8° |
C4 | C3 | HC3 | 110.1° | 109.5° |
C3 | C4 | O4 | 105.6° | 109.5° |
C3 | C4 | C5 | 109.8° | 109.5° |
C3 | C4 | HC4 | 112.6° | 109.5° |
O4 | C4 | C5 | 111.8° | 109.5° |
O4 | C4 | HC4 | 110.6° | 109.5° |
C4 | O4 | HO4 | 109.5° | 106.8° |
C5 | C4 | HC4 | 106.6° | 109.4° |
C4 | C5 | O5 | 117.4° | 109.5° |
C4 | C5 | C6 | 122.7° | 109.5° |
C4 | C5 | HC5 | 89.5° | 109.5° |
O5 | C5 | C6 | 119.5° | 109.5° |
O5 | C5 | HC5 | 115.4° | 109.5° |
C5 | O5 | HO5 | 109.5° | 106.8° |
C6 | C5 | HC5 | 71.8° | 109.4° |
C5 | C6 | O6 | 123.2° | 109.5° |
C5 | C6 | HC61 | 101.9° | 109.5° |
C5 | C6 | HC62 | 105.1° | 109.4° |
O6 | C6 | HC61 | 101.9° | 109.5° |
O6 | C6 | HC62 | 105.1° | 109.5° |
C6 | O6 | P | 114.4° | 106.8° |
HC61 | C6 | HC62 | 121.1° | 109.5° |
O6 | P | O1P | 110.8° | 109.5° |
O6 | P | O2P | 113.1° | 109.5° |
O6 | P | O3P | 106.8° | 109.5° |
O1P | P | O2P | 106.0° | 109.4° |
O1P | P | O3P | 109.8° | 109.5° |
P | O1P | H1P | 109.5° | 106.8° |
O2P | P | O3P | 110.4° | 109.5° |
P | O2P | H2P | 109.5° | 106.9° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | C2 | HC11 | 119.3° | 120.0° |
O1 | C1 | C2 | HC12 | 120.0° | 120.0° |
O1 | C1 | HC11 | HC12 | 119.5° | 120.0° |
O1 | C1 | C2 | C3 | 54.2° | 180.0° |
O1 | C1 | C2 | HC21 | 64.9° | 60.0° |
O1 | C1 | C2 | HC22 | 174.2° | 60.0° |
C2 | C1 | HC11 | HC12 | 119.6° | 120.0° |
C2 | C1 | O1 | HO1 | 74.9° | 180.0° |
C1 | C2 | C3 | HC21 | 119.2° | 120.1° |
C1 | C2 | C3 | HC22 | 120.0° | 120.0° |
C1 | C2 | HC21 | HC22 | 119.5° | 120.0° |
C1 | C2 | C3 | O3 | 135.3° | 65.0° |
C1 | C2 | C3 | C4 | 102.1° | 175.0° |
C1 | C2 | C3 | HC3 | 17.5° | 55.0° |
HC11 | C1 | O1 | HO1 | 44.5° | 60.0° |
HC11 | C1 | C2 | C3 | 173.5° | 60.0° |
HC11 | C1 | C2 | HC21 | 54.4° | 180.0° |
HC11 | C1 | C2 | HC22 | 66.4° | 60.0° |
HC12 | C1 | O1 | HO1 | 165.1° | 60.0° |
HC12 | C1 | C2 | C3 | 65.8° | 60.0° |
HC12 | C1 | C2 | HC21 | 175.1° | 60.0° |
HC12 | C1 | C2 | HC22 | 54.2° | 180.0° |
C3 | C2 | HC21 | HC22 | 119.5° | 119.9° |
C2 | C3 | O3 | C4 | 123.2° | 120.0° |
C2 | C3 | O3 | HC3 | 117.2° | 120.0° |
C2 | C3 | C4 | HC3 | 117.4° | 120.1° |
C2 | C3 | O3 | HO3 | 66.4° | 60.0° |
C2 | C3 | C4 | O4 | 83.4° | 55.0° |
C2 | C3 | C4 | C5 | 37.3° | 175.0° |
C2 | C3 | C4 | HC4 | 155.8° | 65.1° |
HC21 | C2 | C3 | O3 | 105.5° | 55.0° |
HC21 | C2 | C3 | C4 | 17.1° | 64.9° |
HC21 | C2 | C3 | HC3 | 136.6° | 175.0° |
HC22 | C2 | C3 | O3 | 15.3° | 175.0° |
HC22 | C2 | C3 | C4 | 137.9° | 55.0° |
HC22 | C2 | C3 | HC3 | 102.5° | 65.0° |
O3 | C3 | C4 | HC3 | 118.1° | 119.9° |
O3 | C3 | C4 | O4 | 152.1° | 65.0° |
O3 | C3 | C4 | C5 | 87.3° | 55.0° |
O3 | C3 | C4 | HC4 | 31.3° | 174.9° |
C4 | C3 | O3 | HO3 | 170.4° | 60.0° |
C3 | C4 | O4 | C5 | 119.3° | 120.0° |
C3 | C4 | O4 | HC4 | 122.1° | 120.1° |
C3 | C4 | C5 | HC4 | 122.2° | 120.0° |
C3 | C4 | O4 | HO4 | 125.3° | 60.0° |
C3 | C4 | C5 | O5 | 90.0° | 60.0° |
C3 | C4 | C5 | C6 | 83.5° | 180.0° |
C3 | C4 | C5 | HC5 | 151.4° | 60.0° |
HC3 | C3 | O3 | HO3 | 50.8° | 180.0° |
HC3 | C3 | C4 | O4 | 34.0° | 175.1° |
HC3 | C3 | C4 | C5 | 154.6° | 64.9° |
HC3 | C3 | C4 | HC4 | 86.8° | 55.0° |
O4 | C4 | C5 | HC4 | 120.9° | 120.0° |
O4 | C4 | C5 | O5 | 26.9° | 180.0° |
O4 | C4 | C5 | C6 | 159.7° | 60.0° |
O4 | C4 | C5 | HC5 | 91.8° | 60.0° |
C5 | C4 | O4 | HO4 | 6.0° | 60.0° |
C4 | C5 | O5 | C6 | 173.7° | 120.0° |
C4 | C5 | O5 | HC5 | 103.6° | 120.0° |
C4 | C5 | C6 | HC5 | 77.2° | 120.0° |
C4 | C5 | O5 | HO5 | 125.3° | 60.0° |
C4 | C5 | C6 | O6 | 63.9° | 175.0° |
C4 | C5 | C6 | HC61 | 176.8° | 55.0° |
C4 | C5 | C6 | HC62 | 56.1° | 65.0° |
HC4 | C4 | O4 | HO4 | 112.6° | 180.0° |
HC4 | C4 | C5 | O5 | 147.8° | 60.0° |
HC4 | C4 | C5 | C6 | 38.7° | 60.0° |
HC4 | C4 | C5 | HC5 | 29.2° | 180.0° |
O5 | C5 | C6 | HC5 | 109.5° | 120.0° |
O5 | C5 | C6 | O6 | 122.8° | 65.0° |
O5 | C5 | C6 | HC61 | 9.9° | 175.0° |
O5 | C5 | C6 | HC62 | 117.2° | 55.0° |
C6 | C5 | O5 | HO5 | 61.0° | 60.0° |
C5 | C6 | O6 | HC61 | 112.9° | 120.0° |
C5 | C6 | O6 | HC62 | 120.0° | 120.0° |
C5 | C6 | HC61 | HC62 | 116.0° | 120.0° |
C5 | C6 | O6 | P | 152.3° | 180.0° |
HC5 | C5 | O5 | HO5 | 21.7° | 180.0° |
HC5 | C5 | C6 | O6 | 13.3° | 55.0° |
HC5 | C5 | C6 | HC61 | 99.6° | 65.0° |
HC5 | C5 | C6 | HC62 | 133.3° | 175.0° |
O6 | C6 | HC61 | HC62 | 115.9° | 120.0° |
C6 | O6 | P | O1P | 80.9° | 175.0° |
C6 | O6 | P | O2P | 38.0° | 65.0° |
C6 | O6 | P | O3P | 159.6° | 55.0° |
HC61 | C6 | O6 | P | 39.4° | 60.0° |
HC62 | C6 | O6 | P | 87.7° | 60.0° |
O6 | P | O1P | O2P | 123.1° | 120.0° |
O6 | P | O1P | O3P | 117.7° | 120.0° |
O6 | P | O2P | O3P | 119.6° | 120.1° |
O6 | P | O1P | H1P | 30.8° | 180.0° |
O6 | P | O2P | H2P | 122.9° | 60.0° |
O1P | P | O2P | O3P | 118.8° | 120.0° |
O1P | P | O2P | H2P | 1.2° | 60.0° |
O2P | P | O1P | H1P | 153.9° | 60.0° |
O3P | P | O1P | H1P | 86.9° | 60.0° |
O3P | P | O2P | H2P | 117.5° | 180.0° |