Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

Obsolete: DG0

DG0 was replaced with AD0 on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O5C1sing1.43Å1.41Å
O1C1sing1.43Å1.38Å
C1C2sing1.53Å1.52Å
C1H1sing1.09Å1.10Å
O1C4'sing1.43Å1.41Å
O2C2sing1.43Å1.41Å
C2C3sing1.53Å1.53Å
C2H2sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
C4C3sing1.53Å1.52Å
C3O3sing1.43Å1.41Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C5C4sing1.53Å1.53Å
C4O4sing1.43Å1.41Å
C4H4sing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
O5C5sing1.43Å1.41Å
C5C6sing1.51Å1.52Å
C5H5sing1.09Å1.10Å
O62C6doub1.21Å1.25Å
C6O61sing1.34Å1.25Å
O61HO61sing0.97Å0.95Å
H1'C1'sing1.09Å1.10Å
C2'C1'sing1.53Å1.52Å
C1'O1'sing1.43Å1.41Å
C1'O5'sing1.43Å1.41Å
O1'HO1'sing0.97Å0.95Å
O2'C2'sing1.43Å1.41Å
H2'C2'sing1.09Å1.10Å
C2'C3'sing1.53Å1.52Å
O2'HO2'sing0.97Å0.95Å
O3'C3'sing1.43Å1.41Å
C3'H3'sing1.09Å1.10Å
C3'C4'sing1.53Å1.52Å
O3'HO3'sing0.97Å0.95Å
C4'C5'sing1.53Å1.52Å
C4'H4'sing1.09Å1.10Å
O5'C5'sing1.43Å1.41Å
C5'H5'sing1.09Å1.10Å
C5'C6'sing1.51Å1.53Å
C6'O62'doub1.21Å1.25Å
C6'O61'sing1.34Å1.26Å
O61'H61'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O5C1O1111.7°109.5°
O5C1C2109.3°109.4°
O5C1H1109.2°109.5°
C1O5C5112.3°114.1°
O1C1C2112.6°109.5°
O1C1H1105.6°109.5°
C1O1C4'123.7°114.0°
C2C1H1108.3°109.5°
C1C2O2109.5°109.5°
C1C2C3110.4°109.2°
C1C2H2108.8°109.5°
O1C4'C3'109.4°109.5°
O1C4'C5'109.4°109.5°
O1C4'H4'110.1°109.5°
O2C2C3109.4°109.5°
O2C2H2109.8°109.6°
C2O2HO2109.5°114.0°
C3C2H2108.8°109.5°
C2C3C4111.0°109.0°
C2C3O3109.4°109.6°
C2C3H3108.4°109.5°
C4C3O3109.4°109.5°
C4C3H3108.4°109.6°
C3C4C5111.6°109.2°
C3C4O4109.5°109.5°
C3C4H4108.0°109.6°
O3C3H3110.1°109.6°
C3O3HO3109.5°114.0°
C5C4O4109.3°109.5°
C5C4H4108.2°109.5°
C4C5O5109.8°109.4°
C4C5C6111.3°109.5°
C4C5H5108.1°109.4°
O4C4H4110.3°109.5°
C4O4HO4109.5°114.0°
O5C5C6109.6°109.5°
O5C5H5109.8°109.5°
C6C5H5108.2°109.5°
C5C6O62117.9°120.0°
C5C6O61118.0°120.0°
O62C6O61124.0°120.0°
C6O61HO61109.5°116.9°
H1'C1'C2'109.2°109.5°
H1'C1'O1'112.1°109.5°
H1'C1'O5'111.3°109.5°
C2'C1'O1'108.6°109.5°
C2'C1'O5'109.4°109.4°
C1'C2'O2'111.5°109.5°
C1'C2'H2'109.3°109.6°
C1'C2'C3'108.0°109.1°
O1'C1'O5'106.3°109.5°
C1'O1'HO1'109.5°114.0°
C1'O5'C5'108.1°114.1°
O2'C2'H2'107.0°109.6°
O2'C2'C3'110.3°109.5°
C2'O2'HO2'109.5°114.0°
H2'C2'C3'110.6°109.6°
C2'C3'O3'110.2°109.5°
C2'C3'H3'108.5°109.6°
C2'C3'C4'109.9°109.0°
O3'C3'H3'109.6°109.5°
O3'C3'C4'108.8°109.6°
C3'O3'HO3'109.5°114.0°
H3'C3'C4'109.9°109.5°
C3'C4'C5'111.1°109.1°
C3'C4'H4'108.4°109.5°
C5'C4'H4'108.4°109.6°
C4'C5'O5'109.2°109.4°
C4'C5'H5'109.7°109.5°
C4'C5'C6'111.3°109.5°
O5'C5'H5'108.0°109.5°
O5'C5'C6'112.8°109.5°
H5'C5'C6'105.7°109.5°
C5'C6'O62'119.4°120.0°
C5'C6'O61'116.9°120.0°
O62'C6'O61'123.7°120.0°
C6'O61'H61'109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5C1O1C2123.4°119.9°
O5C1O1H1118.6°120.0°
O5C1C2H1118.8°120.0°
O5C1O1C4'117.2°70.0°
O5C1C2O263.3°177.5°
O5C1C2C357.3°57.6°
O5C1C2H2176.7°62.3°
C1O5C5C463.9°61.1°
C1O5C5C658.6°178.9°
C1O5C5H5177.3°58.8°
O1C1C2H1116.4°120.0°
O1C1C2O261.5°57.5°
O1C1C2C3177.9°62.4°
O1C1C2H258.5°177.7°
O1C1O5C5168.6°58.8°
C1O1C4'C3'90.8°150.0°
C1O1C4'C5'147.3°90.3°
C1O1C4'H4'28.2°29.9°
C2C1O1C4'119.4°170.0°
C1C2O2C3121.2°119.7°
C1C2O2H2119.4°120.2°
C1C2C3H2119.4°119.9°
C1C2O2HO2180.0°60.0°
C1C2C3C449.1°57.0°
C1C2C3O371.7°176.9°
C1C2C3H3168.2°62.9°
C2C1O5C566.1°61.2°
H1C1O1C4'1.4°50.0°
H1C1C2O2177.9°62.5°
H1C1C2C361.5°177.6°
H1C1C2H257.9°57.7°
H1C1O5C552.2°178.9°
O1C4'C3'C2'71.2°62.9°
O1C4'C3'O3'49.5°57.0°
O1C4'C3'H3'169.5°177.2°
O1C4'C3'C5'120.9°119.9°
O1C4'C3'H4'120.1°120.1°
O1C4'C5'H4'120.1°120.2°
O1C4'C5'O5'64.3°62.3°
O1C4'C5'H5'177.6°177.7°
O1C4'C5'C6'60.9°57.7°
O2C2C3H2120.0°120.2°
O2C2C3C471.5°176.9°
O2C2C3O3167.7°63.3°
O2C2C3H347.6°57.0°
C3C2O2HO258.9°179.7°
C2C3C4O3120.9°119.9°
C2C3C4H3119.0°119.9°
C2C3O3H3119.1°120.2°
C2C3O3HO3180.0°180.0°
C2C3C4C547.5°57.0°
C2C3C4O4168.7°62.9°
C2C3C4H471.3°176.9°
H2C2O2HO260.6°60.1°
H2C2C3C4168.5°63.0°
H2C2C3O347.7°56.9°
H2C2C3H372.5°177.1°
C4C3O3H3119.1°120.2°
C4C3O3HO358.1°60.4°
C3C4C5O4121.2°119.9°
C3C4C5H4118.6°120.0°
C3C4O4H4118.7°120.2°
C3C4O4HO4180.0°180.0°
C3C4C5O553.5°57.5°
C3C4C5C668.1°177.6°
C3C4C5H5173.2°62.4°
O3C3C4C573.4°176.9°
O3C3C4O447.8°57.0°
O3C3C4H4167.9°63.2°
H3C3O3HO360.9°59.8°
H3C3C4C5166.5°62.9°
H3C3C4O472.3°177.2°
H3C3C4H447.8°57.1°
C5C4O4H4118.8°120.1°
C5C4O4HO457.5°60.3°
C4C5O5C6122.6°120.0°
C4C5O5H5118.7°119.9°
C4C5C6H5118.6°120.0°
C4C5C6O62163.6°115.0°
C4C5C6O6116.3°65.0°
O4C4C5O5174.8°62.4°
O4C4C5C653.2°57.6°
O4C4C5H565.5°177.7°
H4C4O4HO461.3°59.8°
H4C4C5O565.1°177.6°
H4C4C5C6173.3°62.4°
H4C4C5H554.6°57.7°
O5C5C6H5119.7°120.0°
O5C5C6O6274.7°5.0°
O5C5C6O61105.3°175.1°
C5C6O62O61179.9°180.0°
C5C6O61HO61179.9°180.0°
H5C5C6O6245.0°125.0°
H5C5C6O61135.0°55.0°
O62C6O61HO610.0°0.1°
H1'C1'C2'O1'122.4°120.0°
H1'C1'C2'O5'122.0°120.0°
H1'C1'O1'O5'121.8°120.1°
H1'C1'O1'HO1'59.3°60.0°
H1'C1'C2'O2'53.8°62.5°
H1'C1'C2'H2'64.3°57.7°
H1'C1'C2'C3'175.2°177.6°
H1'C1'O5'C5'168.3°178.8°
C2'C1'O1'O5'117.6°119.9°
C2'C1'O1'HO1'180.0°180.0°
C1'C2'O2'H2'119.5°120.2°
C1'C2'O2'C3'120.1°119.6°
C1'C2'H2'C3'118.9°119.7°
C1'C2'O2'HO2'180.0°60.0°
C1'C2'C3'O3'171.4°177.0°
C1'C2'C3'H3'68.6°62.8°
C1'C2'C3'C4'51.6°57.0°
C2'C1'O5'C5'71.0°61.2°
O1'C1'C2'O2'68.6°57.5°
O1'C1'C2'H2'173.3°177.7°
O1'C1'C2'C3'52.8°62.3°
O1'C1'O5'C5'46.0°58.8°
O5'C1'O1'HO1'62.5°60.1°
O5'C1'C2'O2'175.8°177.5°
O5'C1'C2'H2'57.6°62.3°
O5'C1'C2'C3'62.8°57.6°
C1'O5'C5'C4'66.8°61.2°
C1'O5'C5'H5'52.4°58.8°
C1'O5'C5'C6'168.9°178.9°
O2'C2'H2'C3'120.2°120.1°
O2'C2'C3'O3'66.4°63.2°
O2'C2'C3'H3'53.6°57.0°
O2'C2'C3'C4'173.7°176.9°
H2'C2'O2'HO2'60.4°60.2°
H2'C2'C3'O3'51.8°57.0°
H2'C2'C3'H3'171.8°177.2°
H2'C2'C3'C4'68.1°62.9°
C3'C2'O2'HO2'60.0°179.6°
C2'C3'O3'H3'119.3°120.2°
C2'C3'O3'C4'120.5°119.6°
C2'C3'H3'C4'120.2°119.6°
C2'C3'O3'HO3'180.0°60.1°
C2'C3'C4'C5'49.7°57.0°
C2'C3'C4'H4'168.7°177.0°
O3'C3'H3'C4'119.5°120.3°
O3'C3'C4'C5'170.4°176.9°
O3'C3'C4'H4'70.6°63.1°
H3'C3'O3'HO3'60.7°60.1°
H3'C3'C4'C5'69.6°62.9°
H3'C3'C4'H4'49.4°57.1°
C4'C3'O3'HO3'59.4°179.7°
C3'C4'C5'H4'119.0°119.9°
C3'C4'C5'O5'56.6°57.6°
C3'C4'C5'H5'61.5°62.4°
C3'C4'C5'C6'178.2°177.6°
C4'C5'O5'H5'119.2°120.0°
C4'C5'O5'C6'124.3°119.9°
C4'C5'H5'C6'120.1°120.0°
C4'C5'C6'O62'129.4°115.0°
C4'C5'C6'O61'51.0°65.1°
H4'C4'C5'O5'175.7°177.6°
H4'C4'C5'H5'57.5°57.6°
H4'C4'C5'C6'59.1°62.5°
O5'C5'H5'C6'121.0°120.0°
O5'C5'C6'O62'6.3°4.9°
O5'C5'C6'O61'174.2°175.0°
H5'C5'C6'O62'111.6°125.0°
H5'C5'C6'O61'68.0°55.0°
C5'C6'O62'O61'179.5°180.0°
C5'C6'O61'H61'179.5°180.0°
O62'C6'O61'H61'0.0°0.0°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon