DG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP3 | P | sing | 1.61Å | 1.59Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| P | OP1 | doub | 1.48Å | 1.49Å | |
| P | OP2 | sing | 1.61Å | 1.49Å | |
| P | O5' | sing | 1.61Å | 1.59Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C5' | H5' | sing | 1.09Å | 1.11Å | |
| C5' | H5'' | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.45Å | 1.45Å | |
| C4' | C3' | sing | 1.55Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.11Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.54Å | 1.52Å | |
| C2' | H2' | sing | 1.09Å | 1.11Å | |
| C2' | H2'' | sing | 1.09Å | 1.12Å | |
| C1' | N9 | sing | 1.46Å | 1.46Å | |
| C1' | H1' | sing | 1.09Å | 1.12Å | |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.36Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.30Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.36Å | 1.37Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.43Å | |
| C5 | C4 | doub | 1.40Å | 1.38Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.25Å | |
| C6 | N1 | sing | 1.35Å | 1.39Å | |
| N1 | C2 | sing | 1.36Å | 1.39Å | |
| N1 | H1 | sing | 0.97Å | 1.02Å | |
| C2 | N2 | sing | 1.37Å | 1.34Å | |
| C2 | N3 | doub | 1.31Å | 1.32Å | |
| N2 | H21 | sing | 0.97Å | 1.02Å | |
| N2 | H22 | sing | 0.97Å | 1.02Å | |
| N3 | C4 | sing | 1.34Å | 1.35Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| P | OP3 | HOP3 | 109.0° | 106.8° |
| OP3 | P | OP1 | 109.0° | 109.4° |
| OP3 | P | OP2 | 109.3° | 109.4° |
| OP3 | P | O5' | 100.2° | 109.4° |
| OP1 | P | OP2 | 118.7° | 109.5° |
| OP1 | P | O5' | 112.6° | 109.5° |
| OP2 | P | O5' | 105.4° | 109.5° |
| P | OP2 | HOP2 | 118.6° | 106.9° |
| P | O5' | C5' | 119.3° | 106.8° |
| O5' | C5' | C4' | 109.3° | 109.5° |
| O5' | C5' | H5' | 112.3° | 109.4° |
| O5' | C5' | H5'' | 112.3° | 109.5° |
| C4' | C5' | H5' | 112.3° | 109.5° |
| C4' | C5' | H5'' | 112.3° | 109.4° |
| C5' | C4' | O4' | 109.4° | 110.8° |
| C5' | C4' | C3' | 115.8° | 110.7° |
| C5' | C4' | H4' | 104.0° | 110.6° |
| H5' | C5' | H5'' | 98.2° | 109.5° |
| O4' | C4' | C3' | 105.7° | 103.6° |
| O4' | C4' | H4' | 114.4° | 110.5° |
| C4' | O4' | C1' | 110.9° | 106.9° |
| C3' | C4' | H4' | 107.8° | 110.6° |
| C4' | C3' | O3' | 107.1° | 110.9° |
| C4' | C3' | C2' | 104.0° | 102.1° |
| C4' | C3' | H3' | 115.4° | 110.9° |
| O4' | C1' | C2' | 107.1° | 107.4° |
| O4' | C1' | N9 | 108.8° | 109.9° |
| O4' | C1' | H1' | 113.4° | 109.9° |
| O3' | C3' | C2' | 112.3° | 110.9° |
| O3' | C3' | H3' | 107.6° | 110.8° |
| C3' | O3' | HO3' | 107.1° | 106.7° |
| C2' | C3' | H3' | 110.4° | 110.9° |
| C3' | C2' | C1' | 103.6° | 104.2° |
| C3' | C2' | H2' | 114.4° | 110.5° |
| C3' | C2' | H2'' | 114.4° | 110.4° |
| C1' | C2' | H2' | 114.5° | 110.5° |
| C1' | C2' | H2'' | 114.4° | 110.4° |
| C2' | C1' | N9 | 114.7° | 109.9° |
| C2' | C1' | H1' | 107.4° | 109.8° |
| H2' | C2' | H2'' | 96.1° | 110.6° |
| N9 | C1' | H1' | 105.6° | 109.8° |
| C1' | N9 | C8 | 129.6° | 126.2° |
| C1' | N9 | C4 | 123.6° | 126.3° |
| C8 | N9 | C4 | 105.9° | 107.5° |
| N9 | C8 | N7 | 112.9° | 109.8° |
| N9 | C8 | H8 | 126.2° | 125.1° |
| N9 | C4 | C5 | 105.8° | 106.1° |
| N9 | C4 | N3 | 126.1° | 134.3° |
| N7 | C8 | H8 | 121.0° | 125.1° |
| C8 | N7 | C5 | 104.7° | 109.3° |
| N7 | C5 | C6 | 131.0° | 134.2° |
| N7 | C5 | C4 | 110.7° | 107.2° |
| C6 | C5 | C4 | 118.3° | 118.6° |
| C5 | C6 | O6 | 126.9° | 120.8° |
| C5 | C6 | N1 | 112.1° | 118.3° |
| C5 | C4 | N3 | 128.1° | 119.6° |
| O6 | C6 | N1 | 121.0° | 120.9° |
| C6 | N1 | C2 | 124.9° | 120.4° |
| C6 | N1 | H1 | 117.5° | 119.8° |
| C2 | N1 | H1 | 117.6° | 119.8° |
| N1 | C2 | N2 | 115.7° | 119.1° |
| N1 | C2 | N3 | 123.0° | 121.9° |
| N2 | C2 | N3 | 121.2° | 119.1° |
| C2 | N2 | H21 | 115.7° | 120.0° |
| C2 | N2 | H22 | 109.9° | 120.0° |
| C2 | N3 | C4 | 113.4° | 121.2° |
| H21 | N2 | H22 | 110.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP3 | P | OP1 | OP2 | 126.0° | 120.0° |
| OP3 | P | OP1 | O5' | 110.3° | 120.0° |
| OP3 | P | OP2 | O5' | 107.0° | 120.0° |
| OP3 | P | OP2 | HOP2 | 54.2° | 60.0° |
| OP3 | P | O5' | C5' | 74.8° | 180.0° |
| HOP3 | OP3 | P | OP1 | 180.0° | 60.0° |
| HOP3 | OP3 | P | OP2 | 48.9° | 60.0° |
| HOP3 | OP3 | P | O5' | 61.6° | 180.0° |
| OP1 | P | OP2 | O5' | 127.2° | 120.1° |
| OP1 | P | OP2 | HOP2 | 180.0° | 180.0° |
| OP1 | P | O5' | C5' | 40.8° | 60.0° |
| OP2 | P | O5' | C5' | 171.7° | 60.1° |
| O5' | P | OP2 | HOP2 | 52.8° | 59.9° |
| P | O5' | C5' | C4' | 152.6° | 180.0° |
| P | O5' | C5' | H5' | 82.1° | 60.0° |
| P | O5' | C5' | H5'' | 27.4° | 60.0° |
| O5' | C5' | C4' | H5' | 125.3° | 120.0° |
| O5' | C5' | C4' | H5'' | 125.2° | 120.0° |
| O5' | C5' | H5' | H5'' | 118.2° | 120.0° |
| O5' | C5' | C4' | O4' | 72.6° | 65.7° |
| O5' | C5' | C4' | C3' | 46.7° | 180.0° |
| O5' | C5' | C4' | H4' | 164.8° | 57.1° |
| C4' | C5' | H5' | H5'' | 118.2° | 119.9° |
| C5' | C4' | O4' | C3' | 125.4° | 118.7° |
| C5' | C4' | O4' | H4' | 116.2° | 122.9° |
| C5' | C4' | C3' | H4' | 115.9° | 122.9° |
| C5' | C4' | O4' | C1' | 111.8° | 158.5° |
| C5' | C4' | C3' | O3' | 146.1° | 86.1° |
| C5' | C4' | C3' | C2' | 94.8° | 155.7° |
| C5' | C4' | C3' | H3' | 26.3° | 37.5° |
| H5' | C5' | C4' | O4' | 162.1° | 174.3° |
| H5' | C5' | C4' | C3' | 78.5° | 60.0° |
| H5' | C5' | C4' | H4' | 39.5° | 62.9° |
| H5'' | C5' | C4' | O4' | 52.6° | 54.3° |
| H5'' | C5' | C4' | C3' | 172.0° | 60.0° |
| H5'' | C5' | C4' | H4' | 70.0° | 177.1° |
| O4' | C4' | C3' | H4' | 122.7° | 118.4° |
| O4' | C4' | C3' | O3' | 92.6° | 155.2° |
| O4' | C4' | C3' | C2' | 26.5° | 37.0° |
| O4' | C4' | C3' | H3' | 147.7° | 81.3° |
| C4' | O4' | C1' | C2' | 5.4° | 26.3° |
| C4' | O4' | C1' | N9 | 129.9° | 145.9° |
| C4' | O4' | C1' | H1' | 112.9° | 93.2° |
| C3' | C4' | O4' | C1' | 13.5° | 39.8° |
| C4' | C3' | O3' | C2' | 113.6° | 112.7° |
| C4' | C3' | O3' | H3' | 124.6° | 123.6° |
| C4' | C3' | C2' | H3' | 124.4° | 118.2° |
| C4' | C3' | O3' | HO3' | 180.0° | 174.2° |
| C4' | C3' | C2' | C1' | 29.2° | 20.9° |
| C4' | C3' | C2' | H2' | 96.0° | 97.8° |
| C4' | C3' | C2' | H2'' | 154.5° | 139.5° |
| H4' | C4' | O4' | C1' | 132.0° | 78.6° |
| H4' | C4' | C3' | O3' | 30.2° | 36.8° |
| H4' | C4' | C3' | C2' | 149.3° | 81.4° |
| H4' | C4' | C3' | H3' | 89.6° | 160.4° |
| O4' | C1' | C2' | C3' | 21.7° | 1.9° |
| O4' | C1' | C2' | N9 | 120.8° | 119.6° |
| O4' | C1' | C2' | H1' | 122.1° | 119.4° |
| O4' | C1' | C2' | H2' | 103.5° | 120.6° |
| O4' | C1' | C2' | H2'' | 146.9° | 116.7° |
| O4' | C1' | N9 | H1' | 122.1° | 121.0° |
| O4' | C1' | N9 | C8 | 91.0° | 28.3° |
| O4' | C1' | N9 | C4 | 77.2° | 151.7° |
| O3' | C3' | C2' | H3' | 120.1° | 123.6° |
| O3' | C3' | C2' | C1' | 86.2° | 139.2° |
| O3' | C3' | C2' | H2' | 148.5° | 20.4° |
| O3' | C3' | C2' | H2'' | 39.0° | 102.2° |
| C2' | C3' | O3' | HO3' | 66.4° | 61.4° |
| C3' | C2' | C1' | H2' | 125.3° | 118.7° |
| C3' | C2' | C1' | H2'' | 125.2° | 118.6° |
| C3' | C2' | H2' | H2'' | 120.3° | 122.6° |
| C3' | C2' | C1' | N9 | 142.5° | 121.5° |
| C3' | C2' | C1' | H1' | 100.4° | 117.6° |
| H3' | C3' | O3' | HO3' | 55.4° | 62.2° |
| H3' | C3' | C2' | C1' | 153.6° | 97.3° |
| H3' | C3' | C2' | H2' | 28.4° | 144.0° |
| H3' | C3' | C2' | H2'' | 81.1° | 21.3° |
| C1' | C2' | H2' | H2'' | 120.4° | 122.6° |
| C2' | C1' | N9 | H1' | 118.1° | 120.9° |
| C2' | C1' | N9 | C8 | 28.9° | 89.8° |
| C2' | C1' | N9 | C4 | 162.9° | 90.2° |
| H2' | C2' | C1' | N9 | 17.3° | 119.8° |
| H2' | C2' | C1' | H1' | 134.4° | 1.1° |
| H2'' | C2' | C1' | N9 | 92.2° | 2.9° |
| H2'' | C2' | C1' | H1' | 24.8° | 123.8° |
| C1' | N9 | C8 | C4 | 169.8° | 179.9° |
| C1' | N9 | C8 | N7 | 170.8° | 180.0° |
| C1' | N9 | C8 | H8 | 9.1° | 0.0° |
| C1' | N9 | C4 | C5 | 171.0° | 180.0° |
| C1' | N9 | C4 | N3 | 10.2° | 0.2° |
| H1' | C1' | N9 | C8 | 147.0° | 149.3° |
| H1' | C1' | N9 | C4 | 44.8° | 30.7° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 1.1° | 0.0° |
| C8 | N9 | C4 | C5 | 0.4° | 0.1° |
| C8 | N9 | C4 | N3 | 179.3° | 179.9° |
| C4 | N9 | C8 | N7 | 1.0° | 0.1° |
| C4 | N9 | C8 | H8 | 179.0° | 180.0° |
| N9 | C4 | C5 | N7 | 0.3° | 0.1° |
| N9 | C4 | C5 | C6 | 178.8° | 180.0° |
| N9 | C4 | C5 | N3 | 178.8° | 179.8° |
| N9 | C4 | N3 | C2 | 176.7° | 180.0° |
| C8 | N7 | C5 | C6 | 178.1° | 180.0° |
| C8 | N7 | C5 | C4 | 0.8° | 0.1° |
| H8 | C8 | N7 | C5 | 178.8° | 180.0° |
| N7 | C5 | C6 | C4 | 178.8° | 179.9° |
| N7 | C5 | C6 | O6 | 4.6° | 0.0° |
| N7 | C5 | C6 | N1 | 176.6° | 179.6° |
| N7 | C5 | C4 | N3 | 178.6° | 179.9° |
| C5 | C6 | O6 | N1 | 178.7° | 179.6° |
| C5 | C6 | N1 | C2 | 3.2° | 0.6° |
| C5 | C6 | N1 | H1 | 176.9° | 180.0° |
| C6 | C5 | C4 | N3 | 2.4° | 0.1° |
| C4 | C5 | C6 | O6 | 174.2° | 179.9° |
| C4 | C5 | C6 | N1 | 4.6° | 0.3° |
| C5 | C4 | N3 | C2 | 1.9° | 0.2° |
| O6 | C6 | N1 | C2 | 175.7° | 179.7° |
| O6 | C6 | N1 | H1 | 4.3° | 0.4° |
| C6 | N1 | C2 | H1 | 179.9° | 179.3° |
| C6 | N1 | C2 | N2 | 179.4° | 179.6° |
| C6 | N1 | C2 | N3 | 1.1° | 0.6° |
| N1 | C2 | N2 | N3 | 178.3° | 179.8° |
| N1 | C2 | N2 | H21 | 180.0° | 179.7° |
| N1 | C2 | N2 | H22 | 54.7° | 0.6° |
| N1 | C2 | N3 | C4 | 3.6° | 0.2° |
| H1 | N1 | C2 | N2 | 0.6° | 0.3° |
| H1 | N1 | C2 | N3 | 178.9° | 179.9° |
| C2 | N2 | H21 | H22 | 125.3° | 179.7° |
| N2 | C2 | N3 | C4 | 178.2° | 180.0° |
| N3 | C2 | N2 | H21 | 1.6° | 0.1° |
| N3 | C2 | N2 | H22 | 126.9° | 179.7° |
