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SummaryGeometryRelated PDB entries

DFN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C28N22sing1.46Å1.46Å
C28H281sing1.09Å1.12Å
C28H282sing1.09Å1.12Å
C28H283sing1.09Å1.11Å
N22C48sing1.36Å1.37ÅAromatic
N22C21sing1.38Å1.37ÅAromatic
C48C19doub1.38Å1.38ÅAromatic
C48H48sing1.08Å1.10Å
C21C24doub1.39Å1.41ÅAromatic
C21C20sing1.40Å1.41ÅAromatic
C24C31sing1.38Å1.40ÅAromatic
C24H24sing1.08Å1.10Å
C31C29doub1.39Å1.39ÅAromatic
C31H31sing1.08Å1.10Å
C29F39sing1.35Å1.33Å
C29C23sing1.38Å1.40ÅAromatic
C20C23doub1.39Å1.41ÅAromatic
C20C19sing1.47Å1.44ÅAromatic
C23H23sing1.08Å1.10Å
C19C01sing1.47Å1.44Å
C01C02doub1.39Å1.36Å
C01C05sing1.48Å1.49Å
C02C03sing1.47Å1.48Å
C02C08sing1.48Å1.47Å
C03O06doub1.21Å1.24Å
C03N04sing1.34Å1.35Å
N04C05sing1.34Å1.34Å
N04H04sing0.97Å1.02Å
C05O07doub1.21Å1.22Å
C08C09doub1.40Å1.41ÅAromatic
C08C13sing1.40Å1.41ÅAromatic
C09C10sing1.39Å1.41ÅAromatic
C09H09sing1.08Å1.10Å
C10C11doub1.39Å1.40ÅAromatic
C10N15sing1.40Å1.36Å
C11C12sing1.38Å1.40ÅAromatic
C11H11sing1.08Å1.10Å
C12C13doub1.38Å1.40ÅAromatic
C12H12sing1.08Å1.10Å
C13H13sing1.08Å1.10Å
N15C26sing1.47Å1.46Å
N15H15sing0.97Å1.02Å
C26C34sing1.53Å1.53Å
C26H261sing1.09Å1.11Å
C26H262sing1.09Å1.11Å
C34O41sing1.43Å1.44Å
C34C40sing1.53Å1.53Å
C34H34sing1.09Å1.12Å
O41H41sing0.97Å0.95Å
C40O45sing1.43Å1.42Å
C40H401sing1.09Å1.11Å
C40H402sing1.09Å1.12Å
O45H45sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N22C28H281106.9°109.5°
N22C28H282124.4°109.5°
N22C28H283106.9°109.5°
C28N22C48124.4°124.8°
C28N22C21125.8°124.7°
H281C28H282106.9°109.4°
H281C28H283102.7°109.4°
H282C28H283107.0°109.5°
C48N22C21109.8°110.5°
N22C48C19109.7°109.5°
N22C48H48124.7°125.2°
N22C21C24129.7°132.9°
N22C21C20107.0°107.7°
C19C48H48125.6°125.3°
C48C19C20105.9°106.3°
C48C19C01121.5°126.8°
C24C21C20123.2°119.4°
C21C24C31117.9°120.0°
C21C24H24121.2°120.1°
C21C20C23117.6°120.2°
C21C20C19107.6°106.0°
C31C24H24120.9°120.0°
C24C31C29119.3°120.6°
C24C31H31120.7°119.7°
C29C31H31120.0°119.7°
C31C29F39118.9°119.9°
C31C29C23122.8°120.2°
F39C29C23118.3°119.9°
C29C23C20119.2°119.6°
C29C23H23120.2°120.2°
C23C20C19134.8°133.8°
C20C23H23120.6°120.2°
C20C19C01132.5°126.8°
C19C01C02132.2°127.0°
C19C01C05121.3°127.0°
C02C01C05106.4°106.0°
C01C02C03107.5°106.2°
C01C02C08131.4°126.9°
C01C05N04107.6°108.4°
C01C05O07126.7°125.8°
C03C02C08121.1°126.9°
C02C03O06126.0°125.6°
C02C03N04107.0°108.8°
C02C08C09120.1°120.1°
C02C08C13122.1°120.1°
O06C03N04126.9°125.6°
C03N04C05111.5°110.6°
C03N04H04124.4°124.7°
C05N04H04124.1°124.7°
N04C05O07125.7°125.7°
C09C08C13117.6°119.8°
C08C09C10121.9°119.8°
C08C09H09118.8°120.1°
C08C13C12121.0°120.0°
C08C13H13119.6°120.0°
C10C09H09119.2°120.1°
C09C10C11118.8°120.0°
C09C10N15123.7°120.0°
C11C10N15117.5°120.0°
C10C11C12120.4°120.2°
C10C11H11119.8°119.9°
C10N15C26124.5°120.0°
C10N15H15106.9°120.1°
C12C11H11119.9°119.9°
C11C12C13120.2°120.3°
C11C12H12119.6°119.9°
C13C12H12120.2°119.9°
C12C13H13119.4°120.0°
C26N15H15106.9°120.0°
N15C26C34107.2°109.5°
N15C26H261113.0°109.5°
N15C26H262113.1°109.5°
C34C26H261113.1°109.5°
C34C26H262113.1°109.5°
C26C34O41109.2°109.5°
C26C34C40109.9°109.5°
C26C34H34109.8°109.4°
H261C26H26297.4°109.5°
O41C34C40110.6°109.5°
O41C34H34109.0°109.5°
C34O41H41109.2°106.8°
C40C34H34108.3°109.5°
C34C40O45110.1°109.4°
C34C40H401112.0°109.5°
C34C40H402112.0°109.5°
O45C40H401111.9°109.4°
O45C40H402112.0°109.5°
C40O45H45110.1°106.8°
H401C40H40298.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N22C28H281H282135.2°120.1°
N22C28H281H283112.4°120.0°
N22C28H282H283125.3°120.0°
C28N22C48C21179.2°179.7°
C28N22C48C19179.7°180.0°
C28N22C48H480.3°0.1°
C28N22C21C241.1°0.7°
C28N22C21C20179.6°179.9°
H281C28H282H283109.5°119.9°
H281C28N22C4854.7°90.0°
H281C28N22C21124.3°90.3°
H282C28N22C48180.0°150.0°
H282C28N22C210.9°29.7°
H283C28N22C4854.7°29.9°
H283C28N22C21126.2°149.7°
N22C48C19H48180.0°180.0°
C48N22C21C24179.7°179.6°
C48N22C21C200.4°0.4°
N22C48C19C201.3°0.0°
N22C48C19C01178.3°179.9°
C21N22C48C191.1°0.3°
C21N22C48H48178.9°179.8°
N22C21C24C20179.3°179.1°
N22C21C24C31179.5°179.6°
N22C21C24H240.5°0.6°
N22C21C20C23179.8°179.8°
N22C21C20C190.5°0.4°
C48C19C20C211.1°0.3°
C48C19C20C23179.7°180.0°
C48C19C20C01176.5°179.9°
C48C19C01C02142.9°75.1°
C48C19C01C0532.0°105.3°
H48C48C19C20178.7°180.0°
H48C48C19C011.7°0.0°
C21C24C31H24180.0°179.8°
C21C24C31C290.2°0.2°
C21C24C31H31179.9°179.8°
C24C21C20C230.4°0.5°
C24C21C20C19179.0°179.7°
C20C21C24C310.3°0.5°
C20C21C24H24179.8°179.7°
C21C20C23C290.5°0.3°
C21C20C23C19179.2°179.7°
C21C20C23H23179.5°179.7°
C21C20C19C01177.6°179.8°
C24C31C29H31180.0°179.9°
C24C31C29F39179.0°180.0°
C24C31C29C230.2°0.1°
H24C24C31C29179.9°180.0°
H24C24C31H310.1°0.1°
C31C29F39C23179.3°180.0°
C31C29C23C200.4°0.0°
C31C29C23H23179.6°180.0°
H31C31C29F391.0°0.0°
H31C31C29C23179.8°180.0°
F39C29C23C20178.9°180.0°
F39C29C23H231.1°0.0°
C29C23C20H23180.0°180.0°
C29C23C20C19178.7°180.0°
C23C20C19C013.2°0.1°
C19C20C23H231.3°0.1°
C20C19C01C0233.2°105.0°
C20C19C01C05151.9°74.6°
C19C01C02C05175.5°179.7°
C19C01C02C03176.4°180.0°
C19C01C02C082.0°0.1°
C19C01C05N04177.0°179.8°
C19C01C05O073.7°0.3°
C01C02C03C08178.6°179.9°
C01C02C03O06179.9°180.0°
C01C02C03N040.7°0.0°
C02C01C05N040.9°0.5°
C02C01C05O07179.8°180.0°
C01C02C08C0945.9°115.3°
C01C02C08C13138.2°65.1°
C05C01C02C031.0°0.3°
C05C01C02C08177.5°179.8°
C01C05N04C030.5°0.5°
C01C05N04O07179.3°179.5°
C01C05N04H04179.5°179.8°
C02C03O06N04179.2°179.9°
C02C03N04C050.1°0.3°
C02C03N04H04179.9°180.0°
C03C02C08C09132.3°64.6°
C03C02C08C1343.6°115.0°
C08C02C03O061.4°0.1°
C08C02C03N04177.9°179.9°
C02C08C09C13176.1°179.6°
C02C08C09C10179.4°179.8°
C02C08C09H090.6°0.4°
C02C08C13C12178.7°180.0°
C02C08C13H131.2°0.1°
O06C03N04C05179.5°179.6°
O06C03N04H040.6°0.0°
C03N04C05H04180.0°179.7°
C03N04C05O07179.7°180.0°
H04N04C05O070.2°0.3°
C08C09C10H09180.0°179.4°
C08C09C10C111.8°0.6°
C08C09C10N15178.0°179.7°
C09C08C13C122.7°0.3°
C09C08C13H13177.2°179.8°
C13C08C09C103.3°0.6°
C13C08C09H09176.7°180.0°
C08C13C12C110.8°0.0°
C08C13C12H13180.0°179.9°
C08C13C12H12179.2°179.9°
C09C10C11N15179.9°179.7°
C09C10C11C120.2°0.3°
C09C10C11H11179.8°179.7°
C09C10N15C260.9°179.7°
C09C10N15H15124.4°0.3°
H09C09C10C11178.1°180.0°
H09C09C10N152.0°0.3°
C10C11C12H11180.0°180.0°
C10C11C12C130.8°0.0°
C10C11C12H12179.2°180.0°
C11C10N15C26179.2°0.0°
C11C10N15H1555.5°180.0°
N15C10C11C12179.9°180.0°
N15C10C11H110.1°0.0°
C10N15C26H15125.2°180.0°
C10N15C26C3477.3°180.0°
C10N15C26H261157.4°60.0°
C10N15C26H26248.0°60.0°
C11C12C13H12180.0°179.9°
C11C12C13H13179.2°179.9°
H11C11C12C13179.2°180.0°
H11C11C12H120.8°0.1°
H12C12C13H130.8°0.0°
N15C26C34H261125.3°120.0°
N15C26C34H262125.3°120.0°
N15C26H261H262119.0°120.0°
N15C26C34O4172.4°60.0°
N15C26C34C40166.1°180.0°
N15C26C34H3447.1°60.0°
H15N15C26C3448.0°0.0°
H15N15C26H26177.3°120.0°
H15N15C26H262173.3°120.0°
C34C26H261H262119.0°120.0°
C26C34O41C40121.1°120.0°
C26C34O41H34119.9°120.0°
C26C34C40H34119.9°120.0°
C26C34O41H41180.0°60.0°
C26C34C40O4566.6°175.0°
C26C34C40H40158.6°55.0°
C26C34C40H402168.1°65.0°
H261C26C34O4152.9°180.0°
H261C26C34C4068.6°60.0°
H261C26C34H34172.4°60.0°
H262C26C34O41162.3°60.0°
H262C26C34C4040.8°60.0°
H262C26C34H3478.2°180.0°
O41C34C40H34119.4°120.0°
O41C34C40O4554.0°65.0°
O41C34C40H401179.3°175.0°
O41C34C40H40271.2°55.0°
C40C34O41H4158.9°60.0°
C34C40O45H401125.3°120.0°
C34C40O45H402125.3°120.0°
C34C40H401H402117.9°120.0°
C34C40O45H45180.0°180.0°
H34C34O41H4160.1°180.0°
H34C34C40O45173.4°55.0°
H34C34C40H40161.3°65.0°
H34C34C40H40248.2°175.0°
O45C40H401H402117.9°120.0°
H401C40O45H4554.7°60.0°
H402C40O45H4554.7°60.0°

246704

PDB entries from 2025-12-24

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