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DF9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.39Å1.36Å
C6N1doub1.33Å1.37ÅAromatic
C6C5sing1.40Å1.40ÅAromatic
N1C2sing1.32Å1.34ÅAromatic
C2N3doub1.31Å1.35ÅAromatic
N3C4sing1.34Å1.36ÅAromatic
C5C4doub1.41Å1.39ÅAromatic
C5N7sing1.38Å1.36ÅAromatic
C4C9sing1.46Å1.39ÅAromatic
N7C8sing1.36Å1.36ÅAromatic
C8C9doub1.35Å1.40ÅAromatic
C9C10sing1.51Å1.52Å
C10N1'sing1.47Å1.44Å
N1'C2'sing1.47Å1.46Å
N1'C1'sing1.48Å1.45Å
C2'C3'sing1.54Å1.52Å
C3'O3'sing1.43Å1.42Å
C3'C4'sing1.55Å1.52Å
C1'C4'sing1.55Å1.51Å
C4'C5'sing1.53Å1.52Å
C5'S6'sing1.81Å1.76Å
S6'C7'sing1.81Å1.75Å
C7'C21sing1.51Å1.52Å
C21C26doub1.38Å1.39ÅAromatic
C21C22sing1.38Å1.39ÅAromatic
C26C25sing1.38Å1.38ÅAromatic
C25C24doub1.38Å1.39ÅAromatic
C24C23sing1.38Å1.39ÅAromatic
C23C22doub1.38Å1.40ÅAromatic
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
C2H2sing1.08Å1.08Å
N7HN7sing0.97Å1.00Å
C8H8sing1.08Å1.08Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
C1'H1'Asing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C7'H7'sing1.09Å1.10Å
C7'H7'Asing1.09Å1.10Å
C26H26sing1.08Å1.08Å
C25H25sing1.08Å1.08Å
C24H24sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6N1120.3°120.7°
N6C6C5120.7°120.7°
C6N6HN6109.5°120.0°
C6N6HN6A109.5°120.0°
N1C6C5118.9°118.6°
C6N1C2122.1°121.4°
C6C5C4117.3°118.1°
C6C5N7135.5°134.6°
N1C2N3120.5°122.3°
N1C2H2119.8°118.8°
C2N3C4119.4°120.5°
N3C2H2119.8°118.9°
N3C4C5121.8°119.2°
N3C4C9129.3°134.9°
C4C5N7107.2°107.3°
C5C4C9108.9°106.0°
C5N7C8109.5°109.8°
C5N7HN7125.3°125.0°
C4C9C8105.3°107.1°
C4C9C10129.4°126.5°
N7C8C9109.1°109.8°
C8N7HN7125.2°125.1°
N7C8H8125.4°125.0°
C8C9C10125.3°126.4°
C9C8H8125.4°125.1°
C9C10N1'110.8°109.5°
C9C10H10109.0°109.5°
C9C10H10A108.7°109.4°
C10N1'C2'121.0°111.0°
C10N1'C1'119.8°111.0°
N1'C10H10109.0°109.5°
N1'C10H10A108.7°109.5°
C2'N1'C1'119.1°108.6°
N1'C2'C3'100.6°107.2°
N1'C2'H2'112.5°109.9°
N1'C2'H2'A114.4°109.9°
N1'C1'C4'101.2°104.8°
N1'C1'H1'112.3°110.3°
N1'C1'H1'A114.0°110.4°
C2'C3'O3'108.3°110.7°
C2'C3'C4'108.0°103.0°
C3'C2'H2'112.5°109.9°
C3'C2'H2'A114.3°109.9°
C2'C3'H3'109.8°110.7°
O3'C3'C4'105.1°110.7°
O3'C3'H3'112.6°110.7°
C3'O3'HO3'109.5°114.0°
C3'C4'C1'109.1°101.7°
C3'C4'C5'114.0°111.0°
C4'C3'H3'112.8°110.9°
C3'C4'H4'106.4°111.0°
C1'C4'C5'108.9°111.0°
C4'C1'H1'112.3°110.4°
C4'C1'H1'A114.0°110.4°
C1'C4'H4'111.7°111.0°
C4'C5'S6'114.3°109.5°
C5'C4'H4'106.7°110.9°
C4'C5'H5'107.9°109.4°
C4'C5'H5'A106.8°109.4°
C5'S6'C7'103.7°103.0°
S6'C5'H5'107.9°109.5°
S6'C5'H5'A106.8°109.5°
S6'C7'C21111.6°109.4°
S6'C7'H7'108.7°109.5°
S6'C7'H7'A108.3°109.4°
C7'C21C26121.6°120.0°
C7'C21C22119.2°120.0°
C21C7'H7'108.8°109.5°
C21C7'H7'A108.3°109.4°
C26C21C22119.1°120.0°
C21C26C25120.3°120.0°
C21C26H26119.9°120.0°
C21C22C23120.5°120.0°
C21C22H22119.8°120.0°
C26C25C24120.6°120.0°
C25C26H26119.8°119.9°
C26C25H25119.7°120.1°
C25C24C23119.6°120.0°
C24C25H25119.7°120.0°
C25C24H24120.2°120.0°
C24C23C22119.9°120.0°
C23C24H24120.2°120.0°
C24C23H23120.1°120.0°
C22C23H23120.1°120.0°
C23C22H22119.7°120.0°
HN6N6HN6A109.4°119.9°
H10C10H10A110.6°109.5°
H2'C2'H2'A102.9°110.0°
H1'C1'H1'A103.3°110.4°
H5'C5'H5'A113.4°109.5°
H7'C7'H7'A111.2°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6N1C5179.7°179.8°
N6C6N1C2179.5°180.0°
N6C6C5C4179.6°179.8°
N6C6C5N70.0°0.0°
C6N6HN6HN6A120.0°179.8°
C6N1C2N30.2°0.0°
N1C6C5C40.1°0.4°
N1C6C5N7179.8°179.7°
N1C6N6HN622.2°0.1°
N1C6N6HN6A97.8°179.8°
C6N1C2H2179.7°180.0°
C5C6N1C20.3°0.2°
C6C5C4N30.1°0.5°
C6C5C4N7179.7°179.9°
C6C5C4C9179.8°179.7°
C6C5N7C8179.4°180.0°
C5C6N6HN6158.1°179.7°
C5C6N6HN6A81.9°0.5°
C6C5N7HN70.5°0.0°
N1C2N3H2180.0°179.9°
N1C2N3C40.1°0.0°
C2N3C4C50.1°0.2°
C2N3C4C9179.8°180.0°
N3C4C5C9179.9°179.8°
N3C4C5N7179.7°179.7°
N3C4C9C8179.7°179.3°
N3C4C9C101.5°0.0°
C4N3C2H2179.9°180.0°
C4C5N7C80.9°0.2°
C5C4C9C80.2°0.4°
C5C4C9C10178.6°179.7°
C4C5N7HN7179.1°179.8°
N7C5C4C90.4°0.1°
C5N7C8HN7180.0°180.0°
C5N7C8C91.0°0.5°
C5N7C8H8178.9°180.0°
C4C9C8N70.7°0.6°
C4C9C8C10178.9°179.3°
C4C9C10N1'75.8°80.0°
C4C9C8H8179.2°179.9°
C4C9C10H10164.2°160.0°
C4C9C10H10A43.6°40.1°
N7C8C9H8180.0°179.5°
N7C8C9C10178.1°179.9°
C8C9C10N1'105.6°99.2°
C9C8N7HN7179.0°179.5°
C8C9C10H1014.4°20.8°
C8C9C10H10A135.0°140.8°
C9C10N1'H10120.0°120.0°
C9C10N1'H10A119.4°120.0°
C9C10N1'C2'97.4°69.9°
C9C10N1'C1'81.4°169.3°
C10C9C8H81.9°0.6°
C9C10H10H10A119.4°119.9°
C10N1'C2'C1'178.8°122.3°
C10N1'C2'C3'169.1°123.3°
C10N1'C1'C4'175.7°146.3°
N1'C10H10H10A119.4°120.0°
C10N1'C2'H2'49.1°117.3°
C10N1'C2'H2'A67.9°3.8°
C10N1'C1'H1'64.3°27.5°
C10N1'C1'H1'A52.8°94.8°
N1'C2'C3'H2'120.0°119.4°
N1'C2'C3'H2'A123.1°119.4°
N1'C2'C3'O3'100.1°140.7°
N1'C2'C3'C4'13.3°22.3°
C2'N1'C1'C4'5.5°24.1°
C2'N1'C10H10142.7°50.1°
C2'N1'C10H10A22.0°170.1°
N1'C2'H2'H2'A123.6°121.1°
N1'C2'C3'H3'136.7°96.3°
C2'N1'C1'H1'114.5°94.7°
C2'N1'C1'H1'A128.4°143.0°
C1'N1'C2'C3'12.1°1.0°
N1'C1'C4'C3'4.0°37.1°
N1'C1'C4'H1'120.0°118.8°
N1'C1'C4'H1'A122.9°118.8°
N1'C1'C4'C5'121.0°155.2°
C1'N1'C10H1038.6°70.7°
C1'N1'C10H10A159.2°49.3°
C1'N1'C2'H2'132.1°120.4°
C1'N1'C2'H2'A110.9°118.5°
N1'C1'H1'H1'A123.3°122.3°
N1'C1'C4'H4'121.4°81.1°
C2'C3'O3'C4'115.2°113.6°
C2'C3'O3'H3'121.6°123.1°
C2'C3'C4'H3'121.6°118.4°
C2'C3'C4'C1'11.4°35.7°
C2'C3'C4'C5'110.6°153.8°
C3'C2'H2'H2'A123.5°121.1°
C2'C3'O3'HO3'71.9°61.5°
C2'C3'C4'H4'132.1°82.5°
O3'C3'C4'H3'123.0°123.2°
O3'C3'C4'C1'104.1°154.0°
O3'C3'C4'C5'133.9°87.9°
O3'C3'C2'H2'19.9°21.2°
O3'C3'C2'H2'A136.8°99.9°
O3'C3'C4'H4'16.6°35.9°
C3'C4'C1'C5'125.0°118.1°
C3'C4'C1'H4'117.4°118.2°
C3'C4'C5'H4'117.2°123.9°
C3'C4'C5'S6'42.0°175.0°
C4'C3'C2'H2'133.3°97.1°
C4'C3'C2'H2'A109.8°141.7°
C4'C3'O3'HO3'43.4°175.0°
C3'C4'C1'H1'124.0°81.7°
C3'C4'C1'H1'A118.9°155.9°
C3'C4'C5'H5'162.0°55.0°
C3'C4'C5'H5'A75.8°65.0°
C1'C4'C5'H4'120.7°123.8°
C1'C4'C5'S6'80.1°72.7°
C1'C4'C3'H3'132.9°82.8°
C4'C1'H1'H1'A123.3°122.4°
C1'C4'C5'H5'39.9°167.3°
C1'C4'C5'H5'A162.1°47.3°
C4'C5'S6'H5'120.0°120.0°
C4'C5'S6'H5'A117.9°120.0°
C4'C5'S6'C7'132.9°180.0°
C5'C4'C3'H3'11.0°35.3°
C5'C4'C1'H1'1.0°36.4°
C5'C4'C1'H1'A116.1°86.0°
C4'C5'H5'H5'A118.0°119.9°
C5'S6'C7'C2149.3°180.0°
S6'C5'C4'H4'159.2°51.2°
S6'C5'H5'H5'A118.0°120.0°
C5'S6'C7'H7'70.8°60.0°
C5'S6'C7'H7'A168.3°60.1°
S6'C7'C21H7'120.0°120.0°
S6'C7'C21H7'A119.1°119.9°
S6'C7'C21C2621.0°90.0°
S6'C7'C21C22159.2°90.2°
C7'S6'C5'H5'107.1°60.0°
C7'S6'C5'H5'A15.0°60.0°
S6'C7'H7'H7'A119.1°120.0°
C7'C21C26C22179.8°179.7°
C7'C21C26C25179.4°179.9°
C7'C21C22C23179.6°179.8°
C21C7'H7'H7'A119.1°120.0°
C7'C21C26H260.6°0.0°
C7'C21C22H220.4°0.0°
C21C26C25H26180.0°180.0°
C21C26C25C241.0°0.1°
C26C21C22C230.5°0.4°
C26C21C7'H7'141.0°30.0°
C26C21C7'H7'A98.1°150.1°
C21C26C25H25179.0°180.0°
C26C21C22H22179.4°179.7°
C22C21C26C250.7°0.2°
C21C22C23C240.7°0.4°
C21C22C23H22180.0°179.8°
C22C21C7'H7'39.2°149.7°
C22C21C7'H7'A81.8°29.7°
C22C21C26H26179.3°179.7°
C21C22C23H23179.3°179.7°
C26C25C24H25180.0°179.9°
C26C25C24C231.2°0.2°
C26C25C24H24178.8°180.0°
C25C24C23H24180.0°179.9°
C25C24C23C221.0°0.1°
C24C25C26H26178.9°180.0°
C25C24C23H23179.0°180.0°
C24C23C22H23180.0°180.0°
C23C24C25H25178.8°180.0°
C24C23C22H22179.3°179.8°
C22C23C24H24179.0°179.8°
HN7N7C8H81.0°0.0°
H2'C2'C3'H3'103.4°144.3°
H2'AC2'C3'H3'13.6°23.1°
H3'C3'O3'HO3'166.5°61.6°
H3'C3'C4'H4'106.4°159.1°
H1'C1'C4'H4'118.6°160.2°
H1'AC1'C4'H4'1.5°37.8°
H4'C4'C5'H5'80.8°68.9°
H4'C4'C5'H5'A41.4°171.1°
H26C26C25H251.0°0.1°
H25C25C24H241.2°0.1°
H24C24C23H231.0°0.2°
H23C23C22H220.7°0.2°

223166

PDB entries from 2024-07-31

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