Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DD7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C12sing1.43Å1.42Å
C2C1doub1.38Å1.38ÅAromatic
C2C3sing1.38Å1.39ÅAromatic
C1Csing1.38Å1.38ÅAromatic
SC13sing1.76Å1.77Å
SC11sing1.81Å1.82Å
C6C3sing1.51Å1.50Å
C6Nsing1.47Å1.50Å
C3C4doub1.38Å1.39ÅAromatic
CC5doub1.38Å1.38ÅAromatic
C12C11sing1.53Å1.53Å
C12C7sing1.53Å1.58Å
C13C14doub1.39Å1.39ÅAromatic
C13C18sing1.39Å1.39ÅAromatic
C11C10sing1.54Å1.56Å
C14C15sing1.38Å1.38ÅAromatic
C4C5sing1.38Å1.38ÅAromatic
C18C17doub1.38Å1.39ÅAromatic
NC7sing1.47Å1.50Å
C7C8sing1.54Å1.55Å
C15C16doub1.38Å1.38ÅAromatic
C17C16sing1.38Å1.38ÅAromatic
C10Osing1.44Å1.41Å
C10O1sing1.44Å1.41Å
C8O1sing1.45Å1.45Å
C8C9sing1.55Å1.52Å
OC9sing1.44Å1.43Å
C4H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C6H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C10H9sing1.09Å1.10Å
C11H10sing1.09Å1.10Å
C12H11sing1.09Å1.10Å
C14H12sing1.08Å1.08Å
C15H13sing1.08Å1.08Å
O2H14sing0.97Å0.95Å
NH15sing1.01Å1.00Å
C2H17sing1.08Å1.08Å
C1H18sing1.08Å1.08Å
CH19sing1.08Å1.08Å
C18H20sing1.08Å1.08Å
C17H21sing1.08Å1.08Å
C16H22sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C12C11110.3°109.5°
O2C12C7105.3°109.5°
O2C12H11111.5°109.6°
C12O2H14109.5°114.0°
C1C2C3120.7°120.0°
C2C1C120.2°120.0°
C1C2H17119.7°120.0°
C2C1H18119.9°120.0°
C2C3C6120.7°120.0°
C2C3C4118.5°120.0°
C3C2H17119.6°120.0°
C1CC5119.7°120.0°
CC1H18119.9°120.1°
C1CH19120.2°120.0°
C13SC11103.1°103.0°
SC13C14119.2°120.1°
SC13C18121.3°120.0°
SC11C12110.4°109.7°
SC11C10112.1°109.6°
SC11H10105.5°109.6°
C3C6N112.9°109.5°
C6C3C4120.8°120.0°
C3C6H3108.6°109.5°
C3C6H4108.6°109.5°
C6NC7114.1°111.0°
NC6H3108.6°109.5°
NC6H4108.6°109.5°
C6NH15108.3°111.0°
C3C4C5120.7°120.0°
C3C4H1119.6°120.0°
CC5C4120.2°120.0°
CC5H2119.9°120.0°
C5CH19120.1°120.0°
C11C12C7110.3°109.3°
C12C11C10111.7°108.8°
C12C11H10108.6°109.6°
C11C12H11109.9°109.5°
C12C7N109.4°109.8°
C12C7C8109.4°108.6°
C12C7H5109.0°109.6°
C7C12H11109.3°109.5°
C14C13C18119.4°119.9°
C13C14C15120.1°119.9°
C13C14H12120.0°120.1°
C13C18C17120.0°119.9°
C13C18H20120.0°120.1°
C11C10O107.2°108.2°
C11C10O1108.9°107.5°
C11C10H9110.1°112.1°
C10C11H10108.3°109.6°
C14C15C16120.3°120.1°
C15C14H12120.0°120.0°
C14C15H13119.8°120.0°
C5C4H1119.6°120.0°
C4C5H2119.9°120.0°
C18C17C16120.3°120.1°
C17C18H20120.0°120.0°
C18C17H21119.8°120.0°
NC7C8109.5°109.6°
NC7H5110.2°109.6°
C7NH15108.3°111.0°
C7C8O1108.3°107.1°
C7C8C9112.9°107.7°
C8C7H5109.4°109.6°
C7C8H6110.6°112.6°
C15C16C17119.9°120.2°
C16C15H13119.9°120.0°
C15C16H22120.1°119.9°
C16C17H21119.9°119.9°
C17C16H22120.1°120.0°
OC10O1105.6°105.9°
C10OC9106.3°106.9°
OC10H9112.4°111.4°
C10O1C8102.7°102.8°
O1C10H9112.4°111.4°
O1C8C9101.6°102.6°
O1C8H6112.1°112.8°
C8C9O105.1°105.0°
C9C8H6111.0°113.4°
C8C9H7110.5°110.3°
C8C9H8110.6°110.4°
OC9H7110.5°110.4°
OC9H8110.6°110.4°
H3C6H4109.5°109.5°
H7C9H8109.5°110.3°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C12C11S72.3°171.7°
O2C12C11C7115.9°119.9°
O2C12C11H11123.4°120.1°
O2C12C7H11119.9°120.1°
O2C12C11C10162.3°68.4°
O2C12C7N83.0°172.2°
O2C12C7C8157.1°67.9°
O2C12C7H537.5°51.8°
O2C12C11H1043.0°51.4°
C1C2C3H17180.0°179.7°
C2C1CH18180.0°179.7°
C1C2C3C6178.9°180.0°
C1C2C3C40.1°0.0°
C2C1CC50.1°0.6°
C2C1CH19179.9°180.0°
C3C2C1C0.1°0.3°
C2C3C6C4179.0°179.9°
C2C3C6N91.8°90.0°
C2C3C4C50.1°0.0°
C2C3C4H1179.9°179.8°
C2C3C6H3147.7°150.0°
C2C3C6H428.8°30.0°
C3C2C1H18179.9°180.0°
C1CC5H19180.0°179.4°
C1CC5C40.1°0.6°
C1CC5H2180.0°179.4°
CC1C2H17179.9°180.0°
C13SC11C12172.1°70.6°
SC13C14C18178.2°179.7°
C13SC11C1046.8°170.1°
SC13C14C15177.5°179.7°
SC13C18C17177.3°179.7°
C13SC11H1070.8°49.8°
SC13C14H122.5°0.3°
SC13C18H202.7°0.3°
SC11C12C10125.4°119.9°
SC11C12H10115.2°120.4°
SC11C12C7171.8°68.3°
C11SC13C14135.3°174.0°
C11SC13C1842.9°5.7°
SC11C10H10116.0°120.2°
SC11C10O129.2°170.0°
SC11C10O1117.1°56.0°
SC11C10H96.6°66.8°
SC11C12H1151.1°51.6°
C3C6NH3120.5°120.0°
C3C6NH4120.5°120.0°
C6C3C4C5178.9°180.0°
C3C6NC7175.6°180.0°
C6C3C4H11.1°0.3°
C3C6H3H4118.4°120.0°
C3C6NH1563.7°56.0°
C6C3C2H171.1°0.3°
NC6C3C489.2°90.0°
C6NC7C1283.3°158.4°
C6NC7H15120.7°124.0°
C6NC7C8156.9°82.4°
NC6H3H4118.4°120.0°
C6NC7H536.5°37.9°
C3C4C5C0.1°0.3°
C3C4C5H1180.0°179.8°
C3C4C5H2179.9°179.7°
C4C3C6H331.3°30.0°
C4C3C6H4150.3°150.0°
C4C3C2H17179.9°179.7°
CC5C4H2180.0°180.0°
CC5C4H1179.9°179.9°
C5CC1H18180.0°179.7°
C11C12C7H11121.0°119.9°
C12C11C10H10119.5°119.8°
C11C12C7N157.9°67.8°
C11C12C7C838.0°52.0°
C12C11C10O106.3°50.1°
C12C11C10O17.4°63.9°
C11C12C7H581.6°171.7°
C12C11C10H9131.1°173.3°
C11C12O2H14180.0°60.0°
C7C12C11C1046.4°51.5°
C12C7NC8119.8°119.2°
C12C7NH5119.8°120.5°
C12C7C8H5119.3°119.7°
C12C7C8O122.0°64.7°
C12C7C8C989.7°45.0°
C12C7C8H6145.2°170.7°
C7C12C11H1073.0°171.3°
C7C12O2H1460.9°179.8°
C12C7NH1537.4°34.4°
C13C14C15H12180.0°180.0°
C14C13C18C170.9°0.1°
C13C14C15C160.1°0.0°
C13C14C15H13179.9°180.0°
C14C13C18H20179.1°180.0°
C18C13C14C150.7°0.0°
C13C18C17H20180.0°179.9°
C13C18C17C160.5°0.1°
C18C13C14H12179.3°180.0°
C13C18C17H21179.4°180.0°
C11C10OO1116.0°115.1°
C11C10OH9121.2°123.6°
C11C10O1H9122.3°123.2°
C11C10O1C871.1°74.7°
C11C10OC986.2°89.0°
C10C11C12H1174.3°171.5°
C14C15C16H13180.0°180.0°
C14C15C16C170.3°0.0°
C14C15C16H22179.7°179.9°
C4C5CH19180.0°180.0°
C18C17C16C150.1°0.0°
C18C17C16H21180.0°179.9°
C18C17C16H22179.9°179.9°
NC7C8H5120.8°120.4°
NC7C8O197.8°55.2°
NC7C8C9150.5°164.9°
C7NC6H355.1°60.0°
C7NC6H463.8°60.0°
NC7C8H625.4°69.4°
NC7C12H1136.9°52.1°
C7C8O1C1080.2°75.1°
C7C8O1C9119.1°113.2°
C7C8O1H6122.3°124.5°
C7C8C9H6124.8°125.3°
C7C8C9O94.6°90.1°
C7C8C9H7146.1°151.1°
C7C8C9H824.7°29.0°
C8C7C12H1183.0°171.9°
C8C7NH1582.4°153.6°
C15C16C17H22180.0°180.0°
C16C15C14H12179.9°180.0°
C15C16C17H21179.9°180.0°
C17C16C15H13179.7°180.0°
C16C17C18H20179.5°180.0°
OC10O1H9122.8°121.3°
OC10O1C843.8°40.8°
C10OC9C84.5°1.7°
C10OC9H7123.8°120.5°
C10OC9H8114.8°117.3°
OC10C11H1013.2°69.7°
C10O1C8C938.8°38.1°
O1C10OC929.8°26.1°
C10O1C8H6157.4°160.4°
O1C10C11H10127.0°176.2°
O1C8C9H6119.4°121.9°
O1C8C9O21.1°22.8°
O1C8C7H5141.3°175.6°
O1C8C9H798.2°96.1°
O1C8C9H8140.4°141.8°
C8O1C10H9166.6°162.1°
C8C9OH7119.3°118.8°
C8C9OH8119.3°119.0°
C9C8C7H529.6°74.7°
C8C9H7H8122.0°122.2°
OC9C8H6140.5°144.7°
OC9H7H8122.0°122.3°
C9OC10H9152.6°147.4°
H1C4C5H20.1°0.0°
H2C5CH190.0°0.1°
H3C6NH15175.8°63.9°
H4C6NH1556.9°176.1°
H5C7C8H695.4°51.0°
H5C7C12H11157.4°68.4°
H5C7NH15157.2°86.0°
H6C8C9H721.3°25.8°
H6C8C9H8100.2°96.3°
H9C10C11H10109.4°53.5°
H10C11C12H11166.4°68.7°
H11C12O2H1457.5°60.1°
H12C14C15H130.1°0.0°
H13C15C16H220.3°0.0°
H17C2C1H180.1°0.2°
H18C1CH190.0°0.3°
H20C18C17H210.5°0.1°
H21C17C16H220.1°0.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon