Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

DD3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C14C12sing1.51Å1.49Å
C14C15doub1.38Å1.39ÅAromatic
C14C19sing1.38Å1.40ÅAromatic
C13C12sing1.53Å1.52Å
C12O11sing1.43Å1.43Å
C17C16doub1.38Å1.40ÅAromatic
C17C18sing1.38Å1.40ÅAromatic
C16C15sing1.38Å1.39ÅAromatic
C16CL2sing1.74Å1.80Å
N3C4doub1.33Å1.35ÅAromatic
N3C2sing1.33Å1.36ÅAromatic
C10C5doub1.40Å1.49ÅAromatic
C10C9sing1.38Å1.41ÅAromatic
C10O11sing1.36Å1.38Å
C8C7sing1.36Å1.40ÅAromatic
C8C9doub1.39Å1.40ÅAromatic
C7C6doub1.40Å1.39ÅAromatic
C5C4sing1.41Å1.50ÅAromatic
C5C6sing1.42Å1.49ÅAromatic
C4N22sing1.38Å1.36Å
C19C18doub1.38Å1.40ÅAromatic
C6N1sing1.34Å1.35ÅAromatic
N1C2doub1.32Å1.36ÅAromatic
C2N21sing1.38Å1.35Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C13H13Bsing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C17H17sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C18H18sing1.08Å1.08Å
N22HN22sing0.97Å1.00Å
N22HN2Asing0.97Å1.00Å
N21HN21sing0.97Å1.00Å
N21HN2Bsing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12C14C15119.4°120.0°
C12C14C19121.0°120.0°
C14C12C13110.0°109.5°
C14C12O11111.0°109.4°
C14C12H12107.7°109.5°
C15C14C19119.7°120.0°
C14C15C16120.5°120.0°
C14C15H15119.7°120.0°
C14C19C18120.0°120.0°
C14C19H19120.0°120.0°
C13C12O11108.1°109.4°
C12C13H13109.5°109.5°
C12C13H13A109.4°109.5°
C12C13H13B109.5°109.5°
C13C12H12110.5°109.5°
C12O11C10125.8°117.0°
O11C12H12109.5°109.5°
C16C17C18119.8°119.9°
C17C16C15120.0°120.0°
C17C16CL2122.0°120.0°
C16C17H17120.1°120.0°
C17C18C19119.9°120.1°
C18C17H17120.1°120.1°
C17C18H18120.1°119.9°
C15C16CL2118.0°120.0°
C16C15H15119.7°120.0°
C4N3C2122.1°121.4°
N3C4C5117.7°118.4°
N3C4N22118.3°120.8°
N3C2N1123.2°122.8°
N3C2N21117.4°118.6°
C5C10C9118.0°119.3°
C5C10O11119.0°120.3°
C10C5C4124.8°122.0°
C10C5C6118.2°119.6°
C9C10O11123.0°120.4°
C10C9C8121.5°120.7°
C10C9H9119.3°119.7°
C7C8C9122.1°121.1°
C8C7C6120.8°119.9°
C7C8H8118.9°119.5°
C8C7H7119.6°120.1°
C9C8H8118.9°119.5°
C8C9H9119.3°119.7°
C7C6C5119.5°119.5°
C7C6N1121.7°121.8°
C6C7H7119.6°120.1°
C4C5C6117.0°118.4°
C5C4N22123.9°120.8°
C5C6N1118.8°118.7°
C4N22HN22109.5°120.0°
C4N22HN2A109.4°120.0°
C18C19H19120.0°120.0°
C19C18H18120.0°120.0°
C6N1C2121.1°120.4°
N1C2N21119.4°118.6°
C2N21HN21109.5°120.0°
C2N21HN2B109.4°120.0°
H13C13H13A109.5°109.5°
H13C13H13B109.4°109.4°
H13AC13H13B109.5°109.5°
HN22N22HN2A109.5°119.9°
HN21N21HN2B109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12C14C15C19179.6°179.7°
C14C12C13O11121.4°119.9°
C14C12C13H12118.8°120.0°
C14C12O11H12118.7°120.0°
C12C14C15C16179.6°179.9°
C14C12O11C1064.2°154.8°
C12C14C19C18179.8°180.0°
C14C12C13H1342.2°60.0°
C14C12C13H13A77.7°180.0°
C14C12C13H13B162.2°59.9°
C12C14C15H150.4°0.1°
C12C14C19H190.2°0.0°
C15C14C12C1385.7°95.0°
C15C14C12O1134.0°145.0°
C14C15C16C170.1°0.0°
C14C15C16H15180.0°180.0°
C14C15C16CL2179.9°179.8°
C15C14C19C180.2°0.3°
C15C14C12H12153.8°25.0°
C15C14C19H19179.8°179.7°
C19C14C12C1394.8°84.7°
C19C14C12O11145.6°35.3°
C14C19C18C170.3°0.0°
C19C14C15C160.0°0.3°
C14C19C18H19180.0°180.0°
C19C14C12H1225.7°155.3°
C19C14C15H15179.9°179.8°
C14C19C18H18179.7°179.7°
C13C12O11H12120.5°120.0°
C13C12O11C10175.1°85.2°
C12C13H13H13A120.0°120.0°
C12C13H13H13B120.0°120.0°
C12C13H13AH13B120.0°120.1°
C12O11C10C5167.2°174.6°
C12O11C10C912.9°5.4°
O11C12C13H1379.1°180.0°
O11C12C13H13A160.9°60.1°
O11C12C13H13B40.8°60.0°
C16C17C18H17180.0°179.7°
C17C16C15CL2179.9°179.7°
C16C17C18C190.1°0.3°
C17C16C15H15179.9°180.0°
C16C17C18H18179.9°180.0°
C18C17C16C150.1°0.3°
C18C17C16CL2180.0°180.0°
C17C18C19H18180.0°179.7°
C17C18C19H19179.8°180.0°
C15C16C17H17179.9°180.0°
CL2C16C17H170.0°0.3°
CL2C16C15H150.0°0.2°
N3C4C5C10180.0°180.0°
N3C4C5N22179.8°180.0°
N3C4C5C60.2°0.1°
C4N3C2N10.2°0.0°
C4N3C2N21179.9°180.0°
N3C4N22HN2264.3°22.2°
N3C4N22HN2A175.7°157.8°
C2N3C4C50.3°0.0°
C2N3C4N22179.9°180.0°
N3C2N1C60.2°0.0°
N3C2N1N21179.8°180.0°
N3C2N21HN21143.4°0.0°
N3C2N21HN2B96.6°180.0°
C5C10C9O11179.9°180.0°
C5C10C9C80.2°0.1°
C10C5C6C70.0°0.1°
C10C5C4C6179.8°179.9°
C10C5C4N220.2°0.1°
C10C5C6N1179.7°180.0°
C5C10C9H9179.8°179.9°
C10C9C8C70.2°0.1°
C10C9C8H9180.0°179.9°
C9C10C5C4179.9°180.0°
C9C10C5C60.1°0.1°
C10C9C8H8179.9°180.0°
O11C10C9C8179.7°180.0°
O11C10C5C40.0°0.1°
O11C10C5C6179.8°179.9°
C10O11C12H1254.6°34.8°
O11C10C9H90.3°0.1°
C7C8C9H8180.0°180.0°
C8C7C6H7180.0°180.0°
C8C7C6C50.0°0.1°
C8C7C6N1179.7°180.0°
C7C8C9H9179.8°179.9°
C9C8C7C60.1°0.1°
C9C8C7H7179.9°180.0°
C7C6C5C4179.8°180.0°
C7C6C5N1179.7°180.0°
C7C6N1C2180.0°180.0°
C6C7C8H8179.9°180.0°
C4C5C6N10.1°0.1°
C5C4N22HN22115.5°157.7°
C5C4N22HN2A4.5°22.3°
C6C5C4N22180.0°180.0°
C5C6N1C20.3°0.0°
C5C6C7H7180.0°180.0°
C4N22HN22HN2A120.0°180.0°
C19C18C17H17179.9°180.0°
C6N1C2N21179.6°180.0°
N1C6C7H70.3°0.0°
N1C2N21HN2136.8°180.0°
N1C2N21HN2B83.2°0.0°
C2N21HN21HN2B120.0°179.9°
H13C13H13AH13B120.0°119.9°
H13C13C12H12161.0°60.0°
H13AC13C12H1241.0°60.0°
H13BC13C12H1279.0°179.9°
H17C17C18H180.1°0.3°
H8C8C7H70.1°0.0°
H8C8C9H90.2°0.1°
H19C19C18H180.2°0.3°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon