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DCK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C01N02sing1.47Å1.41Å
N02C03sing1.47Å1.40Å
N02C04sing1.47Å1.42Å
N02C05sing1.47Å1.42Å
C05C06sing1.53Å1.51Å
C06O07sing1.43Å1.36Å
C06C08sing1.53Å1.48Å
C08C09sing1.51Å1.50Å
C09O10doub1.21Å1.11Å
C09O11sing1.34Å1.35Å
C01H01sing1.09Å1.10Å
C01H01Asing1.09Å1.10Å
C01H01Bsing1.09Å1.10Å
C03H03sing1.09Å1.10Å
C03H03Asing1.09Å1.10Å
C03H03Bsing1.09Å1.10Å
C04H04sing1.09Å1.10Å
C04H04Asing1.09Å1.10Å
C04H04Bsing1.09Å1.10Å
C05H05sing1.09Å1.10Å
C05H05Asing1.09Å1.10Å
C06H06sing1.09Å1.10Å
O07HO07sing0.97Å0.95Å
C08H08sing1.09Å1.10Å
C08H08Asing1.09Å1.10Å
O11HO11sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C01N02C03104.5°109.5°
C01N02C04107.0°109.4°
C01N02C05113.7°109.5°
N02C01H01109.5°109.4°
N02C01H01A109.5°109.5°
N02C01H01B109.4°109.5°
C03N02C04109.6°109.5°
C03N02C05108.0°109.5°
N02C03H03109.5°109.4°
N02C03H03A109.5°109.5°
N02C03H03B109.5°109.5°
C04N02C05113.6°109.4°
N02C04H04109.5°109.4°
N02C04H04A109.5°109.5°
N02C04H04B109.5°109.5°
N02C05C06125.3°109.4°
N02C05H05104.5°109.5°
N02C05H05A104.5°109.5°
C05C06O07118.7°109.4°
C05C06C08108.4°109.5°
C06C05H05104.5°109.5°
C06C05H05A104.5°109.4°
C05C06H06102.8°109.5°
O07C06C08106.1°109.4°
O07C06H06105.2°109.5°
C06O07HO07109.5°114.1°
C06C08C09119.4°109.4°
C08C06H06116.1°109.5°
C06C08H08106.3°109.5°
C06C08H08A106.3°109.4°
C08C09O10118.0°120.0°
C08C09O11122.1°120.0°
C09C08H08106.3°109.5°
C09C08H08A106.3°109.5°
O10C09O11117.0°120.0°
C09O11HO11109.5°117.0°
H01C01H01A109.5°109.5°
H01C01H01B109.5°109.5°
H01AC01H01B109.5°109.4°
H03C03H03A109.4°109.5°
H03C03H03B109.5°109.5°
H03AC03H03B109.5°109.5°
H04C04H04A109.5°109.5°
H04C04H04B109.5°109.5°
H04AC04H04B109.4°109.5°
H05C05H05A114.0°109.5°
H08C08H08A112.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C01N02C03C04114.4°120.0°
C01N02C03C05121.4°120.0°
C01N02C04C05126.4°120.0°
C01N02C05C06110.9°54.5°
N02C01H01H01A120.0°120.0°
N02C01H01H01B120.0°120.0°
N02C01H01AH01B120.0°120.0°
C01N02C03H03180.0°69.7°
C01N02C03H03A60.0°170.3°
C01N02C03H03B60.0°50.3°
C01N02C04H04180.0°60.0°
C01N02C04H04A60.0°180.0°
C01N02C04H04B60.0°60.0°
C01N02C05H059.1°174.5°
C01N02C05H05A129.1°65.5°
C03N02C04C05120.9°120.0°
C03N02C05C06133.7°65.6°
C03N02C01H01180.0°60.0°
C03N02C01H01A60.0°180.0°
C03N02C01H01B60.0°60.0°
N02C03H03H03A120.0°120.0°
N02C03H03H03B120.0°120.0°
N02C03H03AH03B120.0°120.0°
C03N02C04H0467.3°180.0°
C03N02C04H04A52.7°60.0°
C03N02C04H04B172.7°60.0°
C03N02C05H05106.3°54.4°
C03N02C05H05A13.7°174.5°
C04N02C05C0611.9°174.4°
C04N02C01H0163.8°180.0°
C04N02C01H01A56.2°60.0°
C04N02C01H01B176.2°60.0°
C04N02C03H0365.6°50.3°
C04N02C03H03A174.4°69.7°
C04N02C03H03B54.4°170.3°
N02C04H04H04A120.0°120.0°
N02C04H04H04B120.0°120.0°
N02C04H04AH04B120.0°120.0°
C04N02C05H05131.9°65.6°
C04N02C05H05A108.1°54.5°
N02C05C06H05120.0°120.0°
N02C05C06H05A120.0°120.0°
N02C05C06O0752.4°66.6°
N02C05C06C08173.4°173.5°
C05N02C01H0162.4°60.0°
C05N02C01H01A177.5°60.0°
C05N02C01H01B57.5°179.9°
C05N02C03H0358.6°170.2°
C05N02C03H03A61.4°50.3°
C05N02C03H03B178.6°69.7°
C05N02C04H0453.6°60.0°
C05N02C04H04A173.6°60.0°
C05N02C04H04B66.4°180.0°
N02C05H05H05A113.4°120.1°
N02C05C06H0663.1°53.5°
C05C06O07C08122.2°119.9°
C05C06O07H06114.2°120.0°
C05C06C08H06115.0°120.0°
C05C06C08C09146.5°175.0°
C06C05H05H05A113.5°120.0°
C05C06O07HO07128.8°60.0°
C05C06C08H0826.6°65.0°
C05C06C08H08A93.5°55.1°
O07C06C08H06116.5°120.1°
O07C06C08C0918.0°65.1°
O07C06C05H0567.6°53.5°
O07C06C05H05A172.3°173.5°
O07C06C08H08102.0°55.0°
O07C06C08H08A138.0°175.0°
C06C08C09H08120.0°120.0°
C06C08C09H08A120.0°119.9°
C06C08C09O1026.4°0.1°
C06C08C09O11133.8°180.0°
C08C06C05H0553.4°66.5°
C08C06C05H05A66.6°53.5°
C08C06O07HO076.6°59.9°
C06C08H08H08A115.9°120.0°
C08C09O10O11161.2°180.0°
C09C08C06H0698.5°55.0°
C09C08H08H08A115.9°120.0°
C08C09O11HO11160.4°179.9°
O10C09C08H0893.6°119.9°
O10C09C08H08A146.4°120.0°
O10C09O11HO110.0°0.0°
O11C09C08H08106.2°60.0°
O11C09C08H08A13.8°60.1°
H01C01H01AH01B120.0°120.0°
H03C03H03AH03B120.0°120.0°
H04C04H04AH04B120.0°120.0°
H05C05C06H06176.9°173.5°
H05AC05C06H0656.9°66.5°
H06C06O07HO07117.0°180.0°
H06C06C08H08141.6°175.0°
H06C06C08H08A21.5°65.0°

238895

PDB entries from 2025-07-16

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