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SummaryGeometryRelated PDB entries

Obsolete: DCG

DCG was replaced with DGP on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
POP1doub1.48Å1.55Å
POP2sing1.61Å1.62Å
POP3sing1.61Å1.54Å
PO5'sing1.61Å1.61Å
OP2HOP2sing0.97Å0.95Å
OP3HOP3sing0.97Å0.95Å
O5'C5'sing1.43Å1.40Å
C5'C4'sing1.53Å1.47Å
C5'H5'sing1.09Å1.12Å
C5'H5''sing1.09Å1.11Å
C4'O4'sing1.45Å1.45Å
C4'C3'sing1.55Å1.52Å
C4'H4'sing1.09Å1.12Å
O4'C1'sing1.44Å1.39Å
C3'O3'sing1.43Å1.43Å
C3'C2'sing1.55Å1.51Å
C3'H3'sing1.09Å1.11Å
O3'HO3'sing0.97Å0.95Å
C2'C1'sing1.54Å1.49Å
C2'H2'sing1.09Å1.11Å
C2'H2''sing1.09Å1.11Å
C1'N9sing1.46Å1.48Å
C1'H1'sing1.09Å1.11Å
N9C8sing1.36Å1.39ÅAromatic
N9C4sing1.37Å1.35ÅAromatic
C8N7doub1.30Å1.29ÅAromatic
C8H8sing1.08Å1.10Å
N7C5sing1.36Å1.34ÅAromatic
C5C6sing1.41Å1.39Å
C5C4doub1.40Å1.37ÅAromatic
C6O6doub1.22Å1.21Å
C6N1sing1.35Å1.42Å
N1C2sing1.36Å1.35Å
N1HN1sing0.97Å1.02Å
C2N2sing1.37Å1.33Å
C2N3doub1.31Å1.33Å
N2HN21sing0.97Å1.02Å
N2HN22sing0.97Å1.02Å
N3C4sing1.34Å1.35Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OP1POP2101.4°109.4°
OP1POP3141.8°109.5°
OP1PO5'97.2°109.5°
OP2POP3102.3°109.4°
OP2PO5'101.0°109.4°
POP2HOP2101.4°106.8°
OP3PO5'107.1°109.5°
POP3HOP3141.8°106.9°
PO5'C5'128.0°106.8°
O5'C5'C4'139.6°109.5°
O5'C5'H5'102.0°109.4°
O5'C5'H5''102.0°109.5°
C4'C5'H5'102.0°109.5°
C4'C5'H5''102.0°109.4°
C5'C4'O4'114.2°110.8°
C5'C4'C3'128.1°110.7°
C5'C4'H4'87.7°110.6°
H5'C5'H5''106.0°109.5°
O4'C4'C3'105.1°103.6°
O4'C4'H4'120.3°110.5°
C4'O4'C1'111.5°106.9°
C3'C4'H4'100.9°110.6°
C4'C3'O3'107.5°110.9°
C4'C3'C2'107.3°102.1°
C4'C3'H3'109.4°110.9°
O4'C1'C2'110.0°107.4°
O4'C1'N9114.4°109.9°
O4'C1'H1'108.2°109.9°
O3'C3'C2'99.6°110.9°
O3'C3'H3'116.1°110.8°
C3'O3'HO3'107.5°106.7°
C2'C3'H3'116.2°110.9°
C3'C2'C1'103.4°104.2°
C3'C2'H2'114.5°110.5°
C3'C2'H2''114.5°110.4°
C1'C2'H2'114.5°110.5°
C1'C2'H2''114.5°110.4°
C2'C1'N9115.8°109.9°
C2'C1'H1'106.4°109.8°
H2'C2'H2''96.0°110.6°
N9C1'H1'101.1°109.8°
C1'N9C8125.4°126.2°
C1'N9C4128.3°126.3°
C8N9C4106.0°107.5°
N9C8N7110.2°109.8°
N9C8H8128.1°125.1°
N9C4C5106.3°106.1°
N9C4N3125.6°134.3°
N7C8H8121.7°125.1°
C8N7C5107.6°109.3°
N7C5C6131.5°134.2°
N7C5C4109.8°107.2°
C6C5C4118.7°118.6°
C5C6O6124.3°120.8°
C5C6N1114.3°118.3°
C5C4N3128.1°119.6°
O6C6N1121.3°120.9°
C6N1C2120.9°120.4°
C6N1HN1122.4°119.8°
C2N1HN1116.7°119.8°
N1C2N2117.8°119.1°
N1C2N3126.2°121.9°
N2C2N3115.9°119.1°
C2N2HN21117.9°120.0°
C2N2HN22109.2°120.0°
C2N3C4111.7°121.2°
HN21N2HN22109.2°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OP1POP2OP3149.8°120.0°
OP1POP2O5'99.7°120.0°
OP1POP3O5'127.1°120.1°
OP1POP2HOP2179.9°60.0°
OP1POP3HOP3179.9°180.0°
OP1PO5'C5'113.2°60.0°
OP2POP3O5'105.7°120.0°
OP2POP3HOP352.9°60.0°
OP2PO5'C5'143.6°180.0°
OP3POP2HOP230.2°60.0°
OP3PO5'C5'37.0°60.1°
O5'POP2HOP280.2°180.0°
O5'POP3HOP352.9°59.9°
PO5'C5'C4'62.8°180.0°
PO5'C5'H5'171.9°60.0°
PO5'C5'H5''62.5°60.0°
O5'C5'C4'H5'125.3°120.0°
O5'C5'C4'H5''125.3°120.0°
O5'C5'H5'H5''106.4°120.0°
O5'C5'C4'O4'170.3°65.7°
O5'C5'C4'C3'54.2°180.0°
O5'C5'C4'H4'47.9°57.1°
C4'C5'H5'H5''106.4°119.9°
C5'C4'O4'C3'145.2°118.7°
C5'C4'O4'H4'102.2°122.9°
C5'C4'C3'H4'95.7°122.9°
C5'C4'O4'C1'144.1°158.5°
C5'C4'C3'O3'126.0°86.1°
C5'C4'C3'C2'127.6°155.7°
C5'C4'C3'H3'0.8°37.5°
H5'C5'C4'O4'45.0°174.3°
H5'C5'C4'C3'179.5°60.0°
H5'C5'C4'H4'77.4°62.9°
H5''C5'C4'O4'64.4°54.3°
H5''C5'C4'C3'71.1°60.0°
H5''C5'C4'H4'173.2°177.1°
O4'C4'C3'H4'125.8°118.4°
O4'C4'C3'O3'95.5°155.2°
O4'C4'C3'C2'10.9°37.0°
O4'C4'C3'H3'137.8°81.3°
C4'O4'C1'C2'9.5°26.3°
C4'O4'C1'N9141.9°145.9°
C4'O4'C1'H1'106.3°93.2°
C3'C4'O4'C1'1.0°39.8°
C4'C3'O3'C2'111.7°112.7°
C4'C3'O3'H3'122.7°123.6°
C4'C3'C2'H3'122.7°118.2°
C4'C3'O3'HO3'180.0°174.2°
C4'C3'C2'C1'15.9°20.9°
C4'C3'C2'H2'109.3°97.8°
C4'C3'C2'H2''141.2°139.5°
H4'C4'O4'C1'113.6°78.6°
H4'C4'C3'O3'30.3°36.8°
H4'C4'C3'C2'136.7°81.4°
H4'C4'C3'H3'96.5°160.4°
O4'C1'C2'C3'15.7°1.9°
O4'C1'C2'N9131.6°119.6°
O4'C1'C2'H1'117.0°119.4°
O4'C1'C2'H2'109.5°120.6°
O4'C1'C2'H2''141.0°116.7°
O4'C1'N9H1'115.9°121.0°
O4'C1'N9C889.5°28.3°
O4'C1'N9C496.4°151.7°
O3'C3'C2'H3'125.5°123.6°
O3'C3'C2'C1'95.9°139.2°
O3'C3'C2'H2'138.9°20.4°
O3'C3'C2'H2''29.3°102.2°
C2'C3'O3'HO3'68.3°61.4°
C3'C2'C1'H2'125.2°118.7°
C3'C2'C1'H2''125.3°118.6°
C3'C2'H2'H2''120.4°122.6°
C3'C2'C1'N9147.4°121.5°
C3'C2'C1'H1'101.2°117.6°
H3'C3'O3'HO3'57.3°62.2°
H3'C3'C2'C1'138.6°97.3°
H3'C3'C2'H2'13.4°144.0°
H3'C3'C2'H2''96.1°21.3°
C1'C2'H2'H2''120.4°122.6°
C2'C1'N9H1'114.5°120.9°
C2'C1'N9C840.1°89.8°
C2'C1'N9C4134.1°90.2°
H2'C2'C1'N922.1°119.8°
H2'C2'C1'H1'133.6°1.1°
H2''C2'C1'N987.4°2.9°
H2''C2'C1'H1'24.1°123.8°
C1'N9C8C4175.2°179.9°
C1'N9C8N7176.7°180.0°
C1'N9C8H83.3°0.0°
C1'N9C4C5175.8°180.0°
C1'N9C4N31.6°0.2°
H1'C1'N9C8154.6°149.3°
H1'C1'N9C419.6°30.7°
N9C8N7H8180.0°180.0°
N9C8N7C51.6°0.0°
C8N9C4C50.8°0.1°
C8N9C4N3176.6°179.9°
C4N9C8N71.5°0.1°
C4N9C8H8178.5°180.0°
N9C4C5N70.2°0.1°
N9C4C5C6179.7°180.0°
N9C4C5N3177.3°179.8°
N9C4N3C2178.7°180.0°
C8N7C5C6178.7°180.0°
C8N7C5C41.1°0.1°
H8C8N7C5178.4°180.0°
N7C5C6C4179.8°179.9°
N7C5C6O60.1°0.0°
N7C5C6N1178.9°179.6°
N7C5C4N3177.5°179.9°
C5C6O6N1179.0°179.6°
C5C6N1C20.7°0.6°
C5C6N1HN1179.2°180.0°
C6C5C4N32.4°0.1°
C4C5C6O6180.0°179.9°
C4C5C6N10.9°0.3°
C5C4N3C21.9°0.2°
O6C6N1C2178.4°179.7°
O6C6N1HN11.7°0.4°
C6N1C2HN1180.0°179.3°
C6N1C2N2179.3°179.6°
C6N1C2N31.3°0.6°
N1C2N2N3178.3°179.8°
N1C2N2HN21179.9°179.7°
N1C2N2HN2254.7°0.6°
N1C2N3C40.0°0.2°
HN1N1C2N20.6°0.3°
HN1N1C2N3178.7°179.9°
C2N2HN21HN22125.4°179.7°
N2C2N3C4178.1°180.0°
N3C2N2HN211.7°0.1°
N3C2N2HN22127.0°179.7°

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