DBZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.44Å | 1.45Å | |
| N | H | sing | 1.01Å | 1.02Å | |
| N | H2 | sing | 1.00Å | 1.02Å | |
| CA | CB | sing | 1.52Å | 1.52Å | |
| CA | C | sing | 1.52Å | 1.52Å | |
| CA | HA | sing | 1.10Å | 1.11Å | |
| CB | NG | sing | 1.44Å | 1.47Å | |
| CB | HB1 | sing | 1.10Å | 1.12Å | |
| CB | HB2 | sing | 1.09Å | 1.11Å | |
| NG | CD2 | sing | 1.39Å | 1.35Å | |
| NG | HNG | sing | 1.02Å | 1.02Å | |
| CD2 | OD2 | doub | 1.23Å | 1.23Å | |
| CD2 | C1 | sing | 1.49Å | 1.51Å | |
| C1 | C2 | doub | 1.38Å | 1.40Å | Aromatic |
| C1 | C6 | sing | 1.38Å | 1.38Å | Aromatic |
| C2 | C3 | sing | 1.39Å | 1.40Å | Aromatic |
| C2 | H1 | sing | 1.09Å | 1.10Å | |
| C6 | C5 | doub | 1.39Å | 1.40Å | Aromatic |
| C6 | H6 | sing | 1.09Å | 1.10Å | |
| C3 | C4 | doub | 1.40Å | 1.40Å | Aromatic |
| C3 | H3 | sing | 1.09Å | 1.10Å | |
| C5 | C4 | sing | 1.39Å | 1.40Å | Aromatic |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C4 | H4 | sing | 1.09Å | 1.10Å | |
| C | O | doub | 1.22Å | 35.05Å | |
| C | OXT | sing | 1.36Å | 1.22Å | |
| OXT | HXT | sing | 0.98Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 112.3° | 118.9° |
| CA | N | H2 | 109.3° | 119.0° |
| N | CA | CB | 109.3° | 112.0° |
| N | CA | C | 112.3° | 107.1° |
| N | CA | HA | 107.8° | 105.8° |
| H | N | H2 | 112.3° | 120.7° |
| CB | CA | C | 110.1° | 110.2° |
| CB | CA | HA | 110.2° | 111.9° |
| CA | CB | NG | 107.5° | 112.1° |
| CA | CB | HB1 | 113.0° | 111.3° |
| CA | CB | HB2 | 113.0° | 111.1° |
| C | CA | HA | 107.0° | 109.7° |
| CA | C | O | 32.6° | 125.2° |
| CA | C | OXT | 121.2° | 111.9° |
| NG | CB | HB1 | 113.0° | 107.3° |
| NG | CB | HB2 | 112.9° | 106.9° |
| CB | NG | CD2 | 119.8° | 122.7° |
| CB | NG | HNG | 124.3° | 117.4° |
| HB1 | CB | HB2 | 97.5° | 107.9° |
| CD2 | NG | HNG | 115.8° | 119.8° |
| NG | CD2 | OD2 | 119.1° | 124.6° |
| NG | CD2 | C1 | 119.4° | 116.1° |
| OD2 | CD2 | C1 | 121.6° | 119.3° |
| CD2 | C1 | C2 | 119.2° | 118.9° |
| CD2 | C1 | C6 | 122.7° | 118.9° |
| C2 | C1 | C6 | 118.1° | 122.2° |
| C1 | C2 | C3 | 122.3° | 118.9° |
| C1 | C2 | H1 | 118.9° | 121.7° |
| C1 | C6 | C5 | 120.2° | 118.9° |
| C1 | C6 | H6 | 119.3° | 121.7° |
| C3 | C2 | H1 | 118.8° | 119.4° |
| C2 | C3 | C4 | 119.3° | 120.0° |
| C2 | C3 | H3 | 120.4° | 120.0° |
| C5 | C6 | H6 | 120.5° | 119.4° |
| C6 | C5 | C4 | 122.0° | 120.0° |
| C6 | C5 | H5 | 118.9° | 120.0° |
| C4 | C3 | H3 | 120.3° | 120.0° |
| C3 | C4 | C5 | 118.0° | 120.0° |
| C3 | C4 | H4 | 120.9° | 120.0° |
| C4 | C5 | H5 | 119.2° | 120.0° |
| C5 | C4 | H4 | 121.1° | 120.0° |
| O | C | OXT | 101.8° | 122.9° |
| C | OXT | HXT | 121.3° | 115.2° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 123.6° | 166.4° |
| N | CA | CB | C | 123.8° | 119.1° |
| N | CA | CB | HA | 118.3° | 118.6° |
| N | CA | C | HA | 118.2° | 114.4° |
| N | CA | CB | NG | 52.9° | 178.9° |
| N | CA | CB | HB1 | 178.2° | 60.9° |
| N | CA | CB | HB2 | 72.3° | 59.4° |
| N | CA | C | O | 109.3° | 35.6° |
| N | CA | C | OXT | 169.0° | 146.6° |
| H | N | CA | CB | 54.8° | 136.0° |
| H | N | CA | C | 177.3° | 103.2° |
| H | N | CA | HA | 65.0° | 13.8° |
| H2 | N | CA | CB | 180.0° | 30.7° |
| H2 | N | CA | C | 57.5° | 90.2° |
| H2 | N | CA | HA | 60.2° | 152.8° |
| CB | CA | C | HA | 119.8° | 123.6° |
| CA | CB | NG | HB1 | 125.3° | 122.5° |
| CA | CB | NG | HB2 | 125.3° | 121.9° |
| CA | CB | HB1 | HB2 | 118.9° | 122.2° |
| CA | CB | NG | CD2 | 86.2° | 90.0° |
| CA | CB | NG | HNG | 93.8° | 85.9° |
| CB | CA | C | O | 12.8° | 86.4° |
| CB | CA | C | OXT | 47.0° | 91.4° |
| C | CA | CB | NG | 176.7° | 59.8° |
| C | CA | CB | HB1 | 58.0° | 180.0° |
| C | CA | CB | HB2 | 51.5° | 59.7° |
| CA | C | O | OXT | 131.0° | 177.5° |
| CA | C | OXT | HXT | 180.0° | 177.8° |
| HA | CA | CB | NG | 65.4° | 62.5° |
| HA | CA | CB | HB1 | 59.9° | 57.7° |
| HA | CA | CB | HB2 | 169.3° | 178.0° |
| HA | CA | C | O | 132.5° | 150.0° |
| HA | CA | C | OXT | 72.8° | 32.2° |
| NG | CB | HB1 | HB2 | 118.9° | 114.8° |
| CB | NG | CD2 | HNG | 180.0° | 175.8° |
| CB | NG | CD2 | OD2 | 3.0° | 0.0° |
| CB | NG | CD2 | C1 | 176.5° | 178.8° |
| HB1 | CB | NG | CD2 | 39.1° | 32.5° |
| HB1 | CB | NG | HNG | 141.0° | 151.6° |
| HB2 | CB | NG | CD2 | 148.5° | 148.1° |
| HB2 | CB | NG | HNG | 31.5° | 36.1° |
| NG | CD2 | OD2 | C1 | 179.6° | 178.8° |
| NG | CD2 | C1 | C2 | 148.9° | 153.0° |
| NG | CD2 | C1 | C6 | 29.8° | 26.9° |
| HNG | NG | CD2 | OD2 | 176.9° | 175.8° |
| HNG | NG | CD2 | C1 | 3.5° | 3.0° |
| OD2 | CD2 | C1 | C2 | 30.6° | 25.9° |
| OD2 | CD2 | C1 | C6 | 150.6° | 154.1° |
| CD2 | C1 | C2 | C6 | 178.8° | 180.0° |
| CD2 | C1 | C2 | C3 | 179.9° | 180.0° |
| CD2 | C1 | C2 | H1 | 0.1° | 0.0° |
| CD2 | C1 | C6 | C5 | 178.9° | 180.0° |
| CD2 | C1 | C6 | H6 | 1.2° | 0.1° |
| C1 | C2 | C3 | H1 | 180.0° | 180.0° |
| C2 | C1 | C6 | C5 | 2.4° | 0.0° |
| C2 | C1 | C6 | H6 | 177.6° | 180.0° |
| C1 | C2 | C3 | C4 | 1.3° | 0.0° |
| C1 | C2 | C3 | H3 | 178.7° | 180.0° |
| C6 | C1 | C2 | C3 | 1.3° | 0.0° |
| C6 | C1 | C2 | H1 | 178.8° | 180.0° |
| C1 | C6 | C5 | H6 | 180.0° | 179.9° |
| C1 | C6 | C5 | C4 | 1.0° | 0.0° |
| C1 | C6 | C5 | H5 | 179.0° | 180.0° |
| C2 | C3 | C4 | H3 | 180.0° | 179.9° |
| C2 | C3 | C4 | C5 | 2.7° | 0.0° |
| C2 | C3 | C4 | H4 | 177.3° | 180.0° |
| H1 | C2 | C3 | C4 | 178.7° | 180.0° |
| H1 | C2 | C3 | H3 | 1.3° | 0.0° |
| C6 | C5 | C4 | C3 | 1.6° | 0.0° |
| C6 | C5 | C4 | H5 | 180.0° | 180.0° |
| C6 | C5 | C4 | H4 | 178.4° | 180.0° |
| H6 | C6 | C5 | C4 | 179.0° | 179.9° |
| H6 | C6 | C5 | H5 | 1.0° | 0.0° |
| C3 | C4 | C5 | H4 | 180.0° | 180.0° |
| C3 | C4 | C5 | H5 | 178.4° | 180.0° |
| H3 | C3 | C4 | C5 | 177.3° | 179.9° |
| H3 | C3 | C4 | H4 | 2.7° | 0.1° |
| H5 | C5 | C4 | H4 | 1.6° | 0.0° |
| O | C | OXT | HXT | 151.6° | 0.0° |
