DBB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.49Å | |
CA | C | sing | 1.51Å | 1.56Å | |
CA | CB | sing | 1.53Å | 1.57Å | |
C | O | doub | 1.21Å | 1.24Å | |
CB | CG | sing | 1.53Å | 1.55Å | |
C | OXT | sing | 1.34Å | 1.35Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CG | HG1 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | C | 117.4° | 109.5° |
N | CA | CB | 101.9° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 108.7° | 109.5° |
C | CA | CB | 112.7° | 109.5° |
CA | C | O | 118.6° | 120.0° |
CA | C | OXT | 119.9° | 120.0° |
C | CA | HA | 107.8° | 109.4° |
CA | CB | CG | 112.2° | 109.5° |
CB | CA | HA | 107.8° | 109.4° |
CA | CB | HB2 | 108.8° | 109.5° |
CA | CB | HB3 | 108.8° | 109.5° |
O | C | OXT | 121.4° | 120.0° |
CG | CB | HB2 | 108.8° | 109.5° |
CG | CB | HB3 | 108.8° | 109.4° |
CB | CG | HG1 | 109.5° | 109.5° |
CB | CG | HG2 | 109.5° | 109.4° |
CB | CG | HG3 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.4° | 110.9° |
HB2 | CB | HB3 | 109.5° | 109.5° |
HG1 | CG | HG2 | 109.5° | 109.5° |
HG1 | CG | HG3 | 109.5° | 109.6° |
HG2 | CG | HG3 | 109.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | C | CB | 118.0° | 120.0° |
N | CA | C | HA | 123.2° | 120.0° |
N | CA | CB | HA | 114.4° | 120.0° |
N | CA | C | O | 156.8° | 20.0° |
N | CA | CB | CG | 72.7° | 64.9° |
N | CA | C | OXT | 25.5° | 160.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | HB2 | 166.9° | 175.0° |
N | CA | CB | HB3 | 47.7° | 55.0° |
C | CA | CB | HA | 118.8° | 120.0° |
CA | C | O | OXT | 177.6° | 179.9° |
C | CA | CB | CG | 160.5° | 175.0° |
C | CA | N | H | 180.0° | 60.0° |
C | CA | N | H2 | 60.0° | 63.9° |
C | CA | CB | HB2 | 40.1° | 55.0° |
C | CA | CB | HB3 | 79.1° | 65.0° |
CA | C | OXT | HXT | 177.6° | 180.0° |
CB | CA | C | O | 38.8° | 100.1° |
CA | CB | CG | HB2 | 120.4° | 120.0° |
CA | CB | CG | HB3 | 120.4° | 120.0° |
CB | CA | C | OXT | 143.5° | 80.0° |
CB | CA | N | H | 56.3° | 60.1° |
CB | CA | N | H2 | 63.6° | 176.0° |
CA | CB | HB2 | HB3 | 118.7° | 120.0° |
CA | CB | CG | HG1 | 180.0° | 59.9° |
CA | CB | CG | HG2 | 60.0° | 60.0° |
CA | CB | CG | HG3 | 60.0° | 180.0° |
O | C | CA | HA | 80.0° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
CG | CB | CA | HA | 41.7° | 55.1° |
CG | CB | HB2 | HB3 | 118.8° | 120.0° |
CB | CG | HG1 | HG2 | 120.0° | 119.9° |
CB | CG | HG1 | HG3 | 120.0° | 120.0° |
CB | CG | HG2 | HG3 | 120.0° | 119.9° |
OXT | C | CA | HA | 97.7° | 40.0° |
H | N | CA | HA | 57.3° | 180.0° |
H2 | N | CA | HA | 177.3° | 56.1° |
HA | CA | CB | HB2 | 78.7° | 65.0° |
HA | CA | CB | HB3 | 162.1° | 175.0° |
HB2 | CB | CG | HG1 | 59.6° | 180.0° |
HB2 | CB | CG | HG2 | 179.6° | 60.0° |
HB2 | CB | CG | HG3 | 60.4° | 59.9° |
HB3 | CB | CG | HG1 | 59.6° | 60.0° |
HB3 | CB | CG | HG2 | 60.4° | 180.0° |
HB3 | CB | CG | HG3 | 179.6° | 60.1° |
HG1 | CG | HG2 | HG3 | 120.0° | 120.1° |