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D6P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.55Å
C1O1sing1.43Å1.41Å
C1H11sing1.09Å1.12Å
C1H12sing1.09Å1.11Å
C2C3sing1.53Å1.54Å
C2H21sing1.09Å1.11Å
C2H22sing1.09Å1.12Å
C3C4sing1.53Å1.55Å
C3O3sing1.43Å1.40Å
C3H3sing1.09Å1.11Å
C4C5sing1.53Å1.55Å
C4O4sing1.43Å1.40Å
C4H4sing1.09Å1.12Å
C5C6sing1.51Å1.42Å
C5O5sing1.43Å1.41Å
C5H5sing1.09Å1.11Å
C6C7doub1.31Å1.32Å
C6H6sing1.08Å1.10Å
O1HO1sing0.97Å0.95Å
O3HO3sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
O5HO5sing0.97Å0.95Å
C7Psing1.81Å1.48Å
C7H7sing1.08Å1.10Å
PO1Psing1.61Å1.62Å
PO2Psing1.61Å1.61Å
PO3Pdoub1.48Å1.60Å
O1PH1Psing0.97Å0.95Å
O2PH2Psing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1110.4°109.5°
C2C1H11111.9°109.5°
C2C1H12111.9°109.5°
C1C2C3112.7°109.5°
C1C2H21111.0°109.5°
C1C2H22111.0°109.5°
O1C1H11111.8°109.4°
O1C1H12111.8°109.5°
C1O1HO1110.4°106.8°
H11C1H1298.5°109.5°
C3C2H21111.0°109.5°
C3C2H22111.0°109.5°
C2C3C4105.9°109.6°
C2C3O3110.8°109.5°
C2C3H3111.7°109.5°
H21C2H2299.3°109.4°
C4C3O3111.5°109.5°
C4C3H3110.9°109.4°
C3C4C5109.9°109.6°
C3C4O4107.4°109.4°
C3C4H4111.0°109.5°
O3C3H3106.1°109.4°
C3O3HO3110.7°106.7°
C5C4O4110.7°109.4°
C5C4H4107.7°109.5°
C4C5C6103.9°109.5°
C4C5O5108.2°109.4°
C4C5H5115.0°109.5°
O4C4H4110.1°109.5°
C4O4HO4107.4°106.8°
C6C5O5112.7°109.4°
C6C5H5110.6°109.5°
C5C6C7117.9°120.0°
C5C6H6124.6°120.0°
O5C5H5106.5°109.4°
C5O5HO5108.2°106.8°
C7C6H6117.5°120.0°
C6C7P117.2°120.0°
C6C7H7116.1°120.0°
PC7H7126.7°120.0°
C7PO1P107.6°109.5°
C7PO2P107.6°109.5°
C7PO3P108.3°109.5°
O1PPO2P112.2°109.5°
O1PPO3P111.0°109.4°
PO1PH1P107.5°106.8°
O2PPO3P110.1°109.5°
PO2PH2P107.6°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1H11125.3°120.0°
C2C1O1H12125.3°120.0°
C2C1H11H12117.8°120.0°
C1C2C3H21125.3°120.0°
C1C2C3H22125.2°120.0°
C1C2H21H22116.9°120.0°
C1C2C3C485.2°180.0°
C1C2C3O3153.8°60.0°
C1C2C3H335.7°60.0°
C2C1O1HO1180.0°180.0°
O1C1H11H12117.7°120.0°
O1C1C2C369.1°180.0°
O1C1C2H21165.6°60.0°
O1C1C2H2256.1°60.0°
H11C1C2C3165.6°60.0°
H11C1C2H2140.3°179.9°
H11C1C2H2269.1°60.0°
H11C1O1HO154.7°60.0°
H12C1C2C356.1°60.0°
H12C1C2H2169.2°60.0°
H12C1C2H22178.6°180.0°
H12C1O1HO154.7°60.0°
C3C2H21H22116.9°120.0°
C2C3C4O3120.6°120.1°
C2C3C4H3121.3°120.0°
C2C3O3H3121.4°120.0°
C2C3C4C5171.2°180.0°
C2C3C4O468.3°60.0°
C2C3C4H452.1°59.9°
C2C3O3HO3180.0°60.0°
H21C2C3C4149.5°60.0°
H21C2C3O328.5°60.1°
H21C2C3H389.6°180.0°
H22C2C3C440.1°60.0°
H22C2C3O381.0°180.0°
H22C2C3H3160.9°60.0°
C4C3O3H3120.9°119.9°
C3C4C5O4118.5°119.9°
C3C4C5H4121.0°120.1°
C3C4O4H4121.0°120.0°
C3C4C5C6152.3°180.0°
C3C4C5O532.3°60.0°
C3C4C5H586.6°59.9°
C4C3O3HO362.3°60.1°
C3C4O4HO4179.9°60.1°
O3C3C4C568.3°59.9°
O3C3C4O452.2°60.1°
O3C3C4H4172.7°180.0°
H3C3C4C549.8°60.0°
H3C3C4O4170.3°180.0°
H3C3C4H469.2°60.1°
H3C3O3HO358.6°180.0°
C5C4O4H4119.0°120.0°
C4C5C6O5116.9°120.0°
C4C5C6H5123.9°120.1°
C4C5O5H5124.2°120.0°
C4C5C6C7144.3°120.0°
C4C5C6H635.7°60.1°
C5C4O4HO460.1°59.9°
C4C5O5HO5180.0°60.0°
O4C4C5C689.2°60.0°
O4C4C5O5150.8°180.0°
O4C4C5H531.9°60.0°
H4C4C5C631.3°59.9°
H4C4C5O588.7°60.1°
H4C4C5H5152.4°180.0°
H4C4O4HO458.9°179.9°
C6C5O5H5121.5°120.0°
C5C6C7H6180.0°180.0°
C6C5O5HO565.6°60.0°
C5C6C7P180.0°180.0°
C5C6C7H70.1°0.0°
O5C5C6C798.7°0.0°
O5C5C6H681.3°179.9°
H5C5C6C720.4°120.0°
H5C5C6H6159.6°60.0°
H5C5O5HO555.9°180.0°
C6C7PH7180.0°179.9°
C6C7PO1P170.0°120.0°
C6C7PO2P69.0°120.0°
C6C7PO3P50.0°0.0°
H6C6C7P0.0°0.0°
H6C6C7H7179.9°179.9°
C7PO1PO2P118.1°120.0°
C7PO1PO3P118.2°120.0°
C7PO2PO3P117.8°120.0°
C7PO1PH1P180.0°180.0°
C7PO2PH2P180.0°60.0°
H7C7PO1P10.1°60.1°
H7C7PO2P110.9°59.9°
H7C7PO3P130.1°180.0°
O1PPO2PO3P124.1°120.0°
O1PPO2PH2P61.9°60.0°
O2PPO1PH1P61.8°60.0°
O3PPO1PH1P61.8°60.0°
O3PPO2PH2P62.2°180.0°

224931

PDB entries from 2024-09-11

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