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D5S

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C18sing1.36Å1.37Å
O3C20doub1.22Å1.22Å
C18C16doub1.39Å1.40ÅAromatic
C18C14sing1.40Å1.39ÅAromatic
C20C14sing1.47Å1.53Å
C20O5sing1.35Å1.26Å
C16C12sing1.38Å1.39ÅAromatic
C14C10doub1.40Å1.40ÅAromatic
C12C8doub1.39Å1.40ÅAromatic
C10C8sing1.38Å1.41ÅAromatic
C8C7sing1.51Å1.53Å
C13C17doub1.38Å1.40ÅAromatic
C13C9sing1.39Å1.39ÅAromatic
C7C9sing1.51Å1.53Å
C17C19sing1.39Å1.40ÅAromatic
C9C11doub1.38Å1.41ÅAromatic
C19O2sing1.36Å1.36Å
C19C15doub1.40Å1.40ÅAromatic
C11C15sing1.40Å1.40ÅAromatic
C15C21sing1.47Å1.54Å
C21O6doub1.22Å1.20Å
C21O4sing1.35Å1.26Å
C10H1sing1.08Å1.08Å
C11H2sing1.08Å1.08Å
C12H3sing1.08Å1.08Å
C13H4sing1.08Å1.08Å
C7H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C16H7sing1.08Å1.08Å
C17H8sing1.08Å1.08Å
O1H9sing0.97Å0.95Å
O2H10sing0.97Å0.95Å
O4H11sing0.97Å0.95Å
O5H12sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C18C16119.7°120.2°
O1C18C14120.0°120.1°
C18O1H9109.5°113.9°
O3C20C14121.7°120.0°
O3C20O5124.3°120.0°
C16C18C14120.3°119.7°
C18C16C12120.0°120.1°
C18C16H7120.0°119.9°
C18C14C20119.3°120.2°
C18C14C10117.8°119.6°
C14C20O5113.9°120.0°
C20C14C10122.9°120.2°
C20O5H12109.5°117.0°
C16C12C8122.0°120.4°
C16C12H3119.0°119.8°
C12C16H7120.0°120.0°
C14C10C8123.9°119.9°
C14C10H1118.0°120.1°
C12C8C10116.0°120.3°
C12C8C7120.9°119.8°
C8C12H3119.0°119.8°
C10C8C7123.1°119.8°
C8C10H1118.1°120.0°
C8C7C9121.3°109.4°
C8C7H5106.4°109.4°
C8C7H6106.4°109.4°
C17C13C9121.8°120.4°
C13C17C19120.1°120.1°
C17C13H4119.1°119.9°
C13C17H8119.9°119.9°
C13C9C7121.3°119.8°
C13C9C11116.0°120.3°
C9C13H4119.1°119.8°
C7C9C11122.6°119.9°
C9C7H5106.4°109.5°
C9C7H6106.4°109.4°
C17C19O2121.2°120.2°
C17C19C15120.4°119.7°
C19C17H8119.9°119.9°
C9C11C15124.1°119.9°
C9C11H2118.0°120.0°
O2C19C15118.4°120.2°
C19O2H10109.5°114.0°
C19C15C11117.6°119.6°
C19C15C21119.8°120.2°
C11C15C21122.7°120.2°
C15C11H2118.0°120.1°
C15C21O6118.2°120.0°
C15C21O4116.7°120.0°
O6C21O4125.1°120.0°
C21O4H11109.5°117.0°
H5C7H6109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C18C16C14179.9°179.8°
O1C18C14C200.1°0.3°
O1C18C16C12180.0°180.0°
O1C18C14C10179.9°179.8°
O1C18C16H70.0°0.5°
O3C20C14C1830.7°0.0°
O3C20C14O5179.6°180.0°
O3C20C14C10149.1°180.0°
O3C20O5H120.0°0.1°
C16C18C14C20180.0°180.0°
C18C16C12H7180.0°179.5°
C16C18C14C100.2°0.0°
C18C16C12C80.1°0.4°
C18C16C12H3179.9°180.0°
C16C18O1H9168.5°90.0°
C18C14C20C10179.8°180.0°
C18C14C20O5149.8°180.0°
C14C18C16C120.1°0.2°
C18C14C10C80.2°0.0°
C18C14C10H1179.8°179.7°
C14C18C16H7179.9°179.7°
C14C18O1H911.6°90.2°
C20C14C10C8180.0°180.0°
C20C14C10H10.0°0.3°
C14C20O5H12179.6°179.9°
O5C20C14C1030.5°0.0°
C16C12C8H3180.0°179.5°
C16C12C8C100.1°0.5°
C16C12C8C7179.9°179.5°
C14C10C8C120.2°0.2°
C14C10C8H1180.0°179.7°
C14C10C8C7179.8°179.7°
C12C8C10C7180.0°179.9°
C12C8C7C976.2°90.1°
C12C8C10H1179.8°179.9°
C12C8C7H5162.2°29.9°
C12C8C7H645.5°150.0°
C8C12C16H7179.9°180.0°
C10C8C7C9103.8°90.0°
C10C8C12H3179.9°180.0°
C10C8C7H517.8°150.0°
C10C8C7H6134.5°30.0°
C8C7C9C1320.2°90.0°
C8C7C9H5121.6°120.0°
C8C7C9H6121.6°119.9°
C8C7C9C11159.6°89.9°
C7C8C10H10.2°0.0°
C7C8C12H30.1°0.1°
C8C7H5H6114.6°120.0°
C17C13C9H4180.0°179.1°
C17C13C9C7179.9°179.4°
C13C17C19H8180.0°179.0°
C17C13C9C110.2°0.7°
C13C17C19O2180.0°180.0°
C13C17C19C150.0°0.6°
C13C9C7C11179.8°179.9°
C9C13C17C190.0°0.9°
C13C9C11C150.3°0.1°
C13C9C11H2179.7°179.7°
C13C9C7H5101.5°30.0°
C13C9C7H6141.8°150.1°
C9C13C17H8180.0°180.0°
C7C9C11C15179.9°180.0°
C7C9C11H20.1°0.2°
C7C9C13H40.1°0.3°
C9C7H5H6114.7°120.0°
C17C19O2C15180.0°179.4°
C17C19C15C110.1°0.1°
C17C19C15C21179.9°180.0°
C19C17C13H4180.0°180.0°
C17C19O2H10167.7°90.0°
C9C11C15C190.3°0.2°
C9C11C15H2180.0°179.8°
C9C11C15C21179.9°179.8°
C11C9C13H4179.9°179.7°
C11C9C7H578.8°150.1°
C11C9C7H637.9°30.0°
O2C19C15C11179.8°179.5°
O2C19C15C210.0°0.6°
O2C19C17H80.0°0.9°
C19C15C11C21179.8°180.0°
C19C15C21O631.4°0.0°
C19C15C21O4148.1°180.0°
C19C15C11H2179.7°180.0°
C15C19C17H8180.0°179.7°
C15C19O2H1012.2°89.4°
C11C15C21O6148.4°180.0°
C11C15C21O432.1°0.0°
C15C21O6O4179.5°180.0°
C21C15C11H20.1°0.0°
C15C21O4H11179.5°180.0°
O6C21O4H110.0°0.0°
H3C12C16H70.1°0.5°
H4C13C17H80.0°1.0°

222415

PDB entries from 2024-07-10

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